RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
SPIDR-209ENST00000519141 CTCFLQ8NI51 663 aaPredicted RBP14.42□□□□□ -0.1
SPIDR-209ENST00000519141 ANKS1AQ92625 1134 aa14.42□□□□□ -0.1
SPIDR-209ENST00000519141 TRIM34Q9BYJ4 488 aa14.42□□□□□ -0.1
SPIDR-209ENST00000519141 RBM28Q9NW13 759 aaKnown RBP14.42□□□□□ -0.1
SPIDR-209ENST00000519141 PI4KBQ9UBF8 816 aa14.42□□□□□ -0.1
SPIDR-209ENST00000519141 ZNF70Q9UC06 446 aaPredicted RBP14.42□□□□□ -0.1
SPIDR-209ENST00000519141 TCHHQ07283 1943 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 CLRN2A0PK11 232 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 DDTLA6NHG4 134 aaPredicted RBP14.41□□□□□ -0.1
SPIDR-209ENST00000519141 MYO1BO43795 1136 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 TOMM70O94826 608 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 SHMT1P34896 483 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 FOSBP53539 338 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 SSRP1Q08945 709 aaKnown RBP14.41□□□□□ -0.1
SPIDR-209ENST00000519141 TRIM22Q8IYM9 498 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 PHKBQ93100 1093 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 MYOZ2Q9NPC6 264 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 STX8Q9UNK0 236 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 GJA3Q9Y6H8 435 aa14.41□□□□□ -0.1
SPIDR-209ENST00000519141 GREB1LQ9C091 1923 aaPredicted RBP14.41□□□□□ -0.1
SPIDR-209ENST00000519141 MYH15Q9Y2K3 1946 aa14.4□□□□□ -0.1
SPIDR-209ENST00000519141 FMNL1O95466 1100 aaPredicted RBP14.4□□□□□ -0.1
SPIDR-209ENST00000519141 ZNF280AP59817 542 aaPredicted RBP14.4□□□□□ -0.1
SPIDR-209ENST00000519141 FOXD4L6Q3SYB3 417 aaPredicted RBP14.4□□□□□ -0.1
SPIDR-209ENST00000519141 FKBP1CQ5VVH2 108 aa14.4□□□□□ -0.1
SPIDR-209ENST00000519141 FOXD4L3Q6VB84 417 aaPredicted RBP14.4□□□□□ -0.1
SPIDR-209ENST00000519141 SH3BP5LQ7L8J4 393 aa14.4□□□□□ -0.1
SPIDR-209ENST00000519141 FERMT3Q86UX7 667 aa14.4□□□□□ -0.1
SPIDR-209ENST00000519141 PNMA1Q8ND90 353 aa14.4□□□□□ -0.1
SPIDR-209ENST00000519141 C8orf76Q96K31 380 aa14.4□□□□□ -0.1
SPIDR-209ENST00000519141 SLC26A6Q9BXS9 759 aa14.4□□□□□ -0.1
SPIDR-209ENST00000519141 RRAGCQ9HB90 399 aa14.4□□□□□ -0.1
SPIDR-209ENST00000519141 TCP10L2B9ZVM9 353 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 AKR1B1P15121 316 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 KIF5BP33176 963 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 GMPSP49915 693 aaPredicted RBP14.39□□□□□ -0.11
SPIDR-209ENST00000519141 WASF1Q92558 559 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 ZBED3Q96IU2 234 aaPredicted RBP14.39□□□□□ -0.11
SPIDR-209ENST00000519141 CHAMP1Q96JM3 812 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 VEZTQ9HBM0 779 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 ZNF541Q9H0D2 1346 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 FOXP4Q8IVH2 680 aaPredicted RBP14.39□□□□□ -0.11
SPIDR-209ENST00000519141 RGS22Q8NE09 1264 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 FAM151AQ8WW52 585 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 DPF2Q92785 391 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 CEP95Q96GE4 821 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 CCDC17Q96LX7 622 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 CSRNP1Q96S65 589 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 MAP3K14Q99558 947 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 TMEM47Q9BQJ4 181 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 ALG1Q9BT22 464 aa14.39□□□□□ -0.11
SPIDR-209ENST00000519141 ZSCAN16Q9H4T2 348 aaPredicted RBP14.39□□□□□ -0.11
SPIDR-209ENST00000519141 SHTN1A0MZ66 631 aa14.38□□□□□ -0.11
SPIDR-209ENST00000519141 WNT10BO00744 389 aa14.38□□□□□ -0.11
SPIDR-209ENST00000519141 TOP1P11387 765 aaKnown RBP14.38□□□□□ -0.11
SPIDR-209ENST00000519141 GUCY1B3Q02153 619 aa14.38□□□□□ -0.11
SPIDR-209ENST00000519141 RESTQ13127 1097 aa14.38□□□□□ -0.11
SPIDR-209ENST00000519141 TMTC3Q6ZXV5 915 aa14.38□□□□□ -0.11
SPIDR-209ENST00000519141 MICALL2Q8IY33 904 aa14.38□□□□□ -0.11
SPIDR-209ENST00000519141 RNF26Q9BY78 433 aaPredicted RBP14.38□□□□□ -0.11
SPIDR-209ENST00000519141 DNAJC18Q9H819 358 aa14.38□□□□□ -0.11
SPIDR-209ENST00000519141 MYH4Q9Y623 1939 aa14.38□□□□□ -0.11
SPIDR-209ENST00000519141 IGKV6D-41A0A0C4DH26 115 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 FAM196BA6NMK8 535 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 MPHOSPH10O00566 681 aaKnown RBP14.37□□□□□ -0.11
SPIDR-209ENST00000519141 DEXIO95424 95 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 NCLP19338 710 aaKnown RBP14.37□□□□□ -0.11
SPIDR-209ENST00000519141 AKAP17AQ02040 695 aaKnown RBP14.37□□□□□ -0.11
SPIDR-209ENST00000519141 TRIM29Q14134 588 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 NBPF9Q3BBW0 867 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 PPP4R3BQ5MIZ7 849 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 DPY19L2Q6NUT2 758 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 NBPF11Q86T75 865 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 FAM83AQ86UY5 434 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 CMTR1Q8N1G2 835 aaKnown RBP14.37□□□□□ -0.11
SPIDR-209ENST00000519141 CCDC82Q8N4S0 544 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 FBXO18Q8NFZ0 1043 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPIDR-209ENST00000519141 CNTNAP1P78357 1384 aa14.37□□□□□ -0.11
SPIDR-209ENST00000519141 POTECB2RU33 542 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 PLEKHA8P1O95397 391 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 HSPA6P17066 643 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 NOVP48745 357 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 GRM4Q14833 912 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 CERKLQ49MI3 558 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 METTL16Q86W50 562 aaKnown RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 MTMR4Q9NYA4 1195 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 HERC5Q9UII4 1024 aaKnown RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 CNOT7Q9UIV1 285 aaKnown RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 CNTNAP5Q8WYK1 1306 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 TRAK2O60296 914 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 PRPF40AO75400 957 aaKnown RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 VEGFAP15692 232 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 TNNI2P48788 182 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 GNAQP50148 359 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 KRT85P78386 507 aa14.36□□□□□ -0.11
SPIDR-209ENST00000519141 DNM1Q05193 864 aaKnown RBP14.36□□□□□ -0.11
SPIDR-209ENST00000519141 CSPP1Q1MSJ5 1256 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms