RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 ZC3H12CQ9C0D7 883 aaKnown RBP9.06□□□□□ -0.96
CLK4-202ENST00000519132 ARNT2Q9HBZ2 717 aa9.06□□□□□ -0.96
CLK4-202ENST00000519132 J3QW42 95 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 KSR2Q6VAB6 950 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 AFAP1L2Q8N4X5 818 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 SLIT1O75093 1534 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 CEP170BQ9Y4F5 1589 aaPredicted RBP9.05□□□□□ -0.96
CLK4-202ENST00000519132 PTPRMP28827 1452 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 GSG1L2A8MUP6 293 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 LEO1Q8WVC0 666 aaPredicted RBP9.05□□□□□ -0.96
CLK4-202ENST00000519132 DCDC2BA2VCK2 349 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 NFKBIEO00221 500 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 CILPO75339 1184 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 GRIA2P42262 883 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 ZNF460Q14592 562 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 SLC10A6Q3KNW5 377 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 STRN4Q9NRL3 753 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 PRDM4Q9UKN5 801 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 INTUQ9ULD6 942 aa9.05□□□□□ -0.96
CLK4-202ENST00000519132 SETD1AO15047 1707 aaKnown RBP9.04□□□□□ -0.96
CLK4-202ENST00000519132 ARHGAP23Q9P227 1491 aa9.04□□□□□ -0.96
CLK4-202ENST00000519132 BMP6P22004 513 aa9.04□□□□□ -0.96
CLK4-202ENST00000519132 POLR2BP30876 1174 aaKnown RBP9.04□□□□□ -0.96
CLK4-202ENST00000519132 ITKQ08881 620 aa9.04□□□□□ -0.96
CLK4-202ENST00000519132 C4orf46Q504U0 113 aa9.04□□□□□ -0.96
CLK4-202ENST00000519132 YIPF4Q9BSR8 244 aa9.04□□□□□ -0.96
CLK4-202ENST00000519132 ROCK2O75116 1388 aaKnown RBP9.04□□□□□ -0.96
CLK4-202ENST00000519132 RRP9O43818 475 aaKnown RBP9.04□□□□□ -0.96
CLK4-202ENST00000519132 MYO1HQ8N1T3 1032 aa9.04□□□□□ -0.96
CLK4-202ENST00000519132 TTC8Q8TAM2 541 aa9.04□□□□□ -0.96
CLK4-202ENST00000519132 CBX8Q9HC52 389 aa9.04□□□□□ -0.96
CLK4-202ENST00000519132 PPP4R2Q9NY27 417 aa9.04□□□□□ -0.96
CLK4-202ENST00000519132 ADGRF5Q8IZF2 1346 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 CEBPAP49715 358 aaPredicted RBP9.03□□□□□ -0.96
CLK4-202ENST00000519132 ADGRB1O14514 1584 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 PHF20L1A8MW92 1017 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 RARAP10276 462 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 ID4P47928 161 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 OR13H1Q8NG92 308 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 ZNF576Q9H609 170 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 CAAP1Q9H8G2 361 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 ZDHHC3Q9NYG2 299 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 WASF2Q9Y6W5 498 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 RIMS2Q9UQ26 1411 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 NRXN3Q9Y4C0 1643 aa9.03□□□□□ -0.96
CLK4-202ENST00000519132 BPNT1O95861 308 aa9.02□□□□□ -0.96
CLK4-202ENST00000519132 MSX1P28360 303 aa9.02□□□□□ -0.96
CLK4-202ENST00000519132 CCNFP41002 786 aa9.02□□□□□ -0.96
CLK4-202ENST00000519132 FOXD4Q12950 439 aaPredicted RBP9.02□□□□□ -0.96
CLK4-202ENST00000519132 ZNF622Q969S3 477 aaKnown RBP eCLIP9.02□□□□□ -0.964e-6■□□□□ 8.1
CLK4-202ENST00000519132 TMEM2Q9UHN6 1383 aa9.02□□□□□ -0.96
CLK4-202ENST00000519132 A0A096LPE4 126 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 A0A1W2PPZ6 126 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
CLK4-202ENST00000519132 NFKB1P19838 968 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 TCIRG1Q13488 830 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 LRRC3Q9BY71 257 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 OSGEPQ9NPF4 335 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 PLAAQ9Y263 795 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 USP47Q96K76 1375 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 KHNYNO15037 678 aaKnown RBP9.02□□□□□ -0.97
CLK4-202ENST00000519132 ZNF165P49910 485 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 MPP2Q14168 576 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 LRRTM3Q86VH5 581 aa9.02□□□□□ -0.97
CLK4-202ENST00000519132 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLK4-202ENST00000519132 C14orf93Q9H972 538 aaKnown RBP9.02□□□□□ -0.97
CLK4-202ENST00000519132 NCOA5Q9HCD5 579 aaKnown RBP9.02□□□□□ -0.97
CLK4-202ENST00000519132 SCAF11Q99590 1463 aaKnown RBP9.01□□□□□ -0.97
CLK4-202ENST00000519132 TBX1O43435 398 aa9.01□□□□□ -0.97
CLK4-202ENST00000519132 VHLLQ6RSH7 139 aa9.01□□□□□ -0.97
CLK4-202ENST00000519132 APBA2Q99767 749 aa9.01□□□□□ -0.97
CLK4-202ENST00000519132 CARD11Q9BXL7 1154 aa9.01□□□□□ -0.97
CLK4-202ENST00000519132 PTPRHQ9HD43 1115 aa9.01□□□□□ -0.97
CLK4-202ENST00000519132 ENAMQ9NRM1 1142 aa9.01□□□□□ -0.97
CLK4-202ENST00000519132 CASP7P55210 303 aa9.01□□□□□ -0.97
CLK4-202ENST00000519132 PCBP1Q15365 356 aaKnown RBP eCLIP9.01□□□□□ -0.97
CLK4-202ENST00000519132 ALKQ9UM73 1620 aa9.01□□□□□ -0.97
CLK4-202ENST00000519132 ECEL1O95672 775 aa9□□□□□ -0.97
CLK4-202ENST00000519132 EYA4O95677 639 aa9□□□□□ -0.97
CLK4-202ENST00000519132 PSAPP07602 524 aa9□□□□□ -0.97
CLK4-202ENST00000519132 ITPKAP23677 461 aa9□□□□□ -0.97
CLK4-202ENST00000519132 DHX8Q14562 1220 aaKnown RBP9□□□□□ -0.97
CLK4-202ENST00000519132 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
CLK4-202ENST00000519132 CEP120Q8N960 986 aa9□□□□□ -0.97
CLK4-202ENST00000519132 HOOK2Q96ED9 719 aa9□□□□□ -0.97
CLK4-202ENST00000519132 SPATA9Q9BWV2 254 aa9□□□□□ -0.97
CLK4-202ENST00000519132 THBS1P07996 1170 aa9□□□□□ -0.97
CLK4-202ENST00000519132 HSPA5P11021 654 aaKnown RBP9□□□□□ -0.97
CLK4-202ENST00000519132 SEPT7Q16181 437 aaKnown RBP9□□□□□ -0.97
CLK4-202ENST00000519132 AKAP4Q5JQC9 854 aa9□□□□□ -0.97
CLK4-202ENST00000519132 ZFYVE27Q5T4F4 411 aa9□□□□□ -0.97
CLK4-202ENST00000519132 TPH2Q8IWU9 490 aa9□□□□□ -0.97
CLK4-202ENST00000519132 RASSF4Q9H2L5 321 aa9□□□□□ -0.97
CLK4-202ENST00000519132 SFMBT1Q9UHJ3 866 aa9□□□□□ -0.97
CLK4-202ENST00000519132 FIGNL2A6NMB9 653 aa9□□□□□ -0.97
CLK4-202ENST00000519132 WNT7AO00755 349 aa9□□□□□ -0.97
CLK4-202ENST00000519132 LMNB1P20700 586 aa9□□□□□ -0.97
CLK4-202ENST00000519132 MMP14P50281 582 aa9□□□□□ -0.97
CLK4-202ENST00000519132 CALD1Q05682 793 aaKnown RBP9□□□□□ -0.97
CLK4-202ENST00000519132 SPTY2D1Q68D10 685 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms