RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 CERKLQ49MI3 558 aaPredicted RBP17.08■□□□□ 0.32
TSNARE1-203ENST00000518928 PORCNQ9H237 461 aa17.08■□□□□ 0.32
TSNARE1-203ENST00000518928 ECHDC1Q9NTX5 307 aa17.08■□□□□ 0.32
TSNARE1-203ENST00000518928 TMOD4Q9NZQ9 345 aa17.08■□□□□ 0.32
TSNARE1-203ENST00000518928 MORF4L1Q9UBU8 362 aa17.08■□□□□ 0.32
TSNARE1-203ENST00000518928 BIN2Q9UBW5 565 aaPredicted RBP17.08■□□□□ 0.32
TSNARE1-203ENST00000518928 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
TSNARE1-203ENST00000518928 TTC6Q86TZ1 520 aa17.07■□□□□ 0.32
TSNARE1-203ENST00000518928 RNF208Q9H0X6 261 aa17.07■□□□□ 0.32
TSNARE1-203ENST00000518928 SALL3Q9BXA9 1300 aa17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 C19orf81C9J6K1 198 aa17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 AKR1B1P15121 316 aa17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 VCAM1P19320 739 aa17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 GCLCP48506 637 aaPredicted RBP17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 B4GALNT3Q6L9W6 998 aa17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 CERS3Q8IU89 383 aa17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 SIAH1Q8IUQ4 282 aa17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 SLAIN1Q8ND83 568 aa17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
TSNARE1-203ENST00000518928 IRF5Q13568 498 aa17.05■□□□□ 0.32
TSNARE1-203ENST00000518928 USP17L2Q6R6M4 530 aa17.05■□□□□ 0.32
TSNARE1-203ENST00000518928 UBE2Q1Q7Z7E8 422 aa17.05■□□□□ 0.32
TSNARE1-203ENST00000518928 U2AF1L4Q8WU68 220 aaKnown RBP17.05■□□□□ 0.32
TSNARE1-203ENST00000518928 C12orf42Q96LP6 360 aa17.05■□□□□ 0.32
TSNARE1-203ENST00000518928 FEZ1Q99689 392 aa17.05■□□□□ 0.32
TSNARE1-203ENST00000518928 USP17L12C9JPN9 530 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 USP17L21D6R901 530 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 MPHOSPH10O00566 681 aaKnown RBP17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 SLC34A2O95436 690 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 GJB1P08034 283 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 GJA8P48165 433 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 PABPC4Q13310 644 aaKnown RBP eCLIP17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 UBE3CQ15386 1083 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 TMED8Q6PL24 325 aaPredicted RBP17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 PI4K2BQ8TCG2 481 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 TRIB2Q92519 343 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 OSBP2Q969R2 916 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 COA7Q96BR5 231 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 KIAA1683Q9H0B3 1180 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 BTBD7Q9P203 1132 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 PCDH10Q9P2E7 1040 aa17.04■□□□□ 0.32
TSNARE1-203ENST00000518928 ERVK-9P63128 1117 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 ERVK-24P63145 666 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 NUCB1Q02818 461 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 CCL14Q16627 93 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 C12orf60Q5U649 245 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 CTR9Q6PD62 1173 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 PXYLP1Q8TE99 480 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 GPATCH3Q96I76 525 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 DEFB118Q96PH6 123 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 RPAP3Q9H6T3 665 aaPredicted RBP17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 SLC4A4Q9Y6R1 1079 aa17.03■□□□□ 0.32
TSNARE1-203ENST00000518928 TTC41PQ6P2S7 1318 aa17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 RLFQ13129 1914 aa17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 SPDYE16A6NNV3 312 aaPredicted RBP17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 M0R2C6 588 aa17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 MX1P20591 662 aa17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 CYP2B6P20813 491 aa17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 CDK8P49336 464 aa17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 UBXN2AP68543 259 aa17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 CATSPERGQ6ZRH7 1159 aa17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 DIS3LQ8TF46 1054 aaKnown RBP17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 EPB41L4AQ9HCS5 686 aaPredicted RBP17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
TSNARE1-203ENST00000518928 CEP290O15078 2479 aa17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 GPR142Q7Z601 462 aa17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 CHD1LQ86WJ1 897 aa17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 KBTBD3Q8NAB2 608 aa17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 USP6NLQ92738 828 aa17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 STRBPQ96SI9 672 aaKnown RBP17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 CABP5Q9NP86 173 aa17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 PAK6Q9NQU5 681 aaPredicted RBP17.01■□□□□ 0.31
TSNARE1-203ENST00000518928 MYH8P13535 1937 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 GSG1L2A8MUP6 293 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 USP17L15C9J2P7 530 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 USP17L13C9JLJ4 530 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 USP17L11C9JVI0 530 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 USP17L18D6R9N7 530 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 USP17L22D6RA61 530 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 USP17L17D6RBQ6 530 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 USP17L19D6RCP7 530 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 USP17L20D6RJB6 530 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 H0YGN5 161 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 SGPL1O95470 568 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 PDE1AP54750 535 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 USP17L24Q0WX57 530 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 C16orf86Q6ZW13 317 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 ATP8A2Q9NTI2 1148 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 STAP2Q9UGK3 403 aa17■□□□□ 0.31
TSNARE1-203ENST00000518928 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
TSNARE1-203ENST00000518928 MORN1Q5T089 497 aa16.99■□□□□ 0.31
TSNARE1-203ENST00000518928 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.99■□□□□ 0.319e-6■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms