RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	SBK1	Q52WX2	424 aa		28.95	■■■□□ 2.22
CNOT7-204	ENST00000518885	C16orf86	Q6ZW13	317 aa		28.95	■■■□□ 2.22
CNOT7-204	ENST00000518885	COA7	Q96BR5	231 aa		28.95	■■■□□ 2.22
CNOT7-204	ENST00000518885	APP	P05067	770 aa		28.94	■■■□□ 2.22
CNOT7-204	ENST00000518885	TDO2	P48775	406 aa		28.94	■■■□□ 2.22
CNOT7-204	ENST00000518885	CTR9	Q6PD62	1173 aa		28.94	■■■□□ 2.22
CNOT7-204	ENST00000518885	TMEM106C	Q9BVX2	250 aa		28.94	■■■□□ 2.22
CNOT7-204	ENST00000518885	ARHGEF10L	Q9HCE6	1279 aa		28.94	■■■□□ 2.22
CNOT7-204	ENST00000518885	EMILIN3	Q9NT22	766 aa		28.94	■■■□□ 2.22
CNOT7-204	ENST00000518885	USP17L15	C9J2P7	530 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	USP17L13	C9JLJ4	530 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	USP17L11	C9JVI0	530 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	USP17L18	D6R9N7	530 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	USP17L22	D6RA61	530 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	USP17L17	D6RBQ6	530 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	USP17L19	D6RCP7	530 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	USP17L20	D6RJB6	530 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	ECM2	O94769	699 aa	Predicted RBP	28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	CDK8	P49336	464 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	USP17L24	Q0WX57	530 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	SEPT2	Q15019	361 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	ZYX	Q15942	572 aa	Known RBP	28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	DYNLL2	Q96FJ2	89 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	LNPK	Q9C0E8	428 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	HTT	P42858	3142 aa		28.93	■■■□□ 2.22
CNOT7-204	ENST00000518885	GSG1L2	A8MUP6	293 aa		28.92	■■■□□ 2.22
CNOT7-204	ENST00000518885	CHD1L	Q86WJ1	897 aa		28.92	■■■□□ 2.22
CNOT7-204	ENST00000518885	PATL2	C9JE40	543 aa	Known RBP	28.91	■■■□□ 2.22
CNOT7-204	ENST00000518885	HERVK_113	P62684	666 aa		28.91	■■■□□ 2.22
CNOT7-204	ENST00000518885	B4GALNT3	Q6L9W6	998 aa		28.91	■■■□□ 2.22
CNOT7-204	ENST00000518885	SLC44A5	Q8NCS7	719 aa		28.91	■■■□□ 2.22
CNOT7-204	ENST00000518885	ZNF333	Q96JL9	665 aa		28.91	■■■□□ 2.22
CNOT7-204	ENST00000518885	MORF4L1	Q9UBU8	362 aa		28.91	■■■□□ 2.22
CNOT7-204	ENST00000518885		M0R2C6	588 aa		28.9	■■■□□ 2.22
CNOT7-204	ENST00000518885	CTGF	P29279	349 aa		28.9	■■■□□ 2.22
CNOT7-204	ENST00000518885	ZMYM1	Q5SVZ6	1142 aa		28.9	■■■□□ 2.22
CNOT7-204	ENST00000518885	GPRC5A	Q8NFJ5	357 aa		28.9	■■■□□ 2.22
CNOT7-204	ENST00000518885	P2RX7	Q99572	595 aa	Known RBP	28.9	■■■□□ 2.22
CNOT7-204	ENST00000518885	MKNK2	Q9HBH9	465 aa		28.9	■■■□□ 2.22
CNOT7-204	ENST00000518885	BAZ2A	Q9UIF9	1905 aa	Known RBP	28.9	■■■□□ 2.22
CNOT7-204	ENST00000518885	CYP2D7	A0A087X1C5	515 aa		28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	MINDY4B	A8MYZ0	360 aa		28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	SLC3A2	P08195	630 aa	Known RBP	28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	GUCY1A2	P33402	732 aa		28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	NUCB1	Q02818	461 aa		28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	EVX2	Q03828	476 aa		28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	ICA1	Q05084	483 aa		28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	CCAR1	Q8IX12	1150 aa	Known RBP	28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	SLAIN1	Q8ND83	568 aa		28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	ACER1	Q8TDN7	264 aa		28.89	■■■□□ 2.22
CNOT7-204	ENST00000518885	VCAM1	P19320	739 aa		28.88	■■■□□ 2.21
CNOT7-204	ENST00000518885	GRK4	P32298	578 aa		28.88	■■■□□ 2.21
CNOT7-204	ENST00000518885	PRKCZ	Q05513	592 aa		28.88	■■■□□ 2.21
CNOT7-204	ENST00000518885	LPAR1	Q92633	364 aa		28.88	■■■□□ 2.21
CNOT7-204	ENST00000518885	KANSL2	Q9H9L4	492 aa		28.88	■■■□□ 2.21
CNOT7-204	ENST00000518885	MYH8	P13535	1937 aa		28.88	■■■□□ 2.21
CNOT7-204	ENST00000518885	ROBO3	Q96MS0	1386 aa		28.88	■■■□□ 2.21
CNOT7-204	ENST00000518885	IGHD	P01880	384 aa		28.87	■■■□□ 2.21
CNOT7-204	ENST00000518885	AKR1B1	P15121	316 aa		28.87	■■■□□ 2.21
CNOT7-204	ENST00000518885	UBXN2A	P68543	259 aa		28.87	■■■□□ 2.21
CNOT7-204	ENST00000518885	BIN2	Q9UBW5	565 aa	Predicted RBP	28.87	■■■□□ 2.21
CNOT7-204	ENST00000518885	ZSWIM8	A7E2V4	1837 aa		28.87	■■■□□ 2.21
CNOT7-204	ENST00000518885	TRIM6-TRIM34	B2RNG4	842 aa		28.86	■■■□□ 2.21
CNOT7-204	ENST00000518885	IRF5	Q13568	498 aa		28.86	■■■□□ 2.21
CNOT7-204	ENST00000518885	CATSPERG	Q6ZRH7	1159 aa		28.86	■■■□□ 2.21
CNOT7-204	ENST00000518885	IFNL3	Q8IZI9	196 aa		28.86	■■■□□ 2.21
CNOT7-204	ENST00000518885	SH3TC2	Q8TF17	1288 aa		28.86	■■■□□ 2.21
CNOT7-204	ENST00000518885	NAPB	Q9H115	298 aa		28.86	■■■□□ 2.21
CNOT7-204	ENST00000518885	MGAM	O43451	1857 aa		28.85	■■■□□ 2.21
CNOT7-204	ENST00000518885	CCNA1	P78396	465 aa		28.85	■■■□□ 2.21
CNOT7-204	ENST00000518885	RPAP3	Q9H6T3	665 aa	Predicted RBP	28.85	■■■□□ 2.21
CNOT7-204	ENST00000518885	HELLS	Q9NRZ9	838 aa		28.85	■■■□□ 2.21
CNOT7-204	ENST00000518885	MAPK4	P31152	587 aa		28.84	■■■□□ 2.21
CNOT7-204	ENST00000518885	FLT3LG	P49771	235 aa		28.84	■■■□□ 2.21
CNOT7-204	ENST00000518885	PXYLP1	Q8TE99	480 aa		28.84	■■■□□ 2.21
CNOT7-204	ENST00000518885	CWC22	Q9HCG8	908 aa	Known RBP	28.84	■■■□□ 2.21
CNOT7-204	ENST00000518885	TMX2	Q9Y320	296 aa		28.84	■■■□□ 2.21
CNOT7-204	ENST00000518885	RABGAP1	Q9Y3P9	1069 aa		28.84	■■■□□ 2.21
CNOT7-204	ENST00000518885	ADCY3	O60266	1144 aa		28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	ERVK-9	P63128	1117 aa		28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	ERVK-24	P63145	666 aa		28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	PDE4B	Q07343	736 aa		28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	ZNF444	Q8N0Y2	327 aa	Predicted RBP	28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	SEC62	Q99442	399 aa	Known RBP	28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	PAGR1	Q9BTK6	254 aa		28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	OSBPL3	Q9H4L5	887 aa		28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	HOXC10	Q9NYD6	342 aa		28.83	■■■□□ 2.21
CNOT7-204	ENST00000518885	LBX2	Q6XYB7	198 aa		28.82	■■■□□ 2.2
CNOT7-204	ENST00000518885	TANGO6	Q9C0B7	1094 aa		28.82	■■■□□ 2.2
CNOT7-204	ENST00000518885	GOPC	Q9HD26	462 aa		28.82	■■■□□ 2.2
CNOT7-204	ENST00000518885	GABRQ	Q9UN88	632 aa		28.82	■■■□□ 2.2
CNOT7-204	ENST00000518885		A0A1W2PRG0	241 aa		28.81	■■■□□ 2.2
CNOT7-204	ENST00000518885	MFAP1	P55081	439 aa	Known RBP	28.81	■■■□□ 2.2
CNOT7-204	ENST00000518885	ATP2B2	Q01814	1243 aa		28.81	■■■□□ 2.2
CNOT7-204	ENST00000518885	SOCS4	Q8WXH5	440 aa		28.81	■■■□□ 2.2
CNOT7-204	ENST00000518885	RILPL2	Q969X0	211 aa		28.81	■■■□□ 2.2
CNOT7-204	ENST00000518885	VCPKMT	Q9H867	229 aa		28.81	■■■□□ 2.2
CNOT7-204	ENST00000518885	RBPJL	Q9UBG7	517 aa		28.81	■■■□□ 2.2
CNOT7-204	ENST00000518885	CENPF	P49454	3210 aa		28.81	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms