RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 DIS3L2Q8IYB7 885 aaKnown RBP11.07□□□□□ -0.64
ARFGEF1-203ENST00000518230 MSL3Q8N5Y2 521 aaKnown RBP11.07□□□□□ -0.64
ARFGEF1-203ENST00000518230 PLBD2Q8NHP8 589 aa11.07□□□□□ -0.64
ARFGEF1-203ENST00000518230 APPBP2Q92624 585 aa11.07□□□□□ -0.64
ARFGEF1-203ENST00000518230 GBP3Q9H0R5 595 aa11.07□□□□□ -0.64
ARFGEF1-203ENST00000518230 GLI3P10071 1580 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 PRPF6O94906 941 aaKnown RBP11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 WHAMMP3Q1A5X7 153 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 SPATA1Q5VX52 437 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 IGDCC4Q8TDY8 1250 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 EPSTI1Q96J88 318 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 CHP1Q99653 195 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 EHD4Q9H223 541 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 VPS16Q9H269 839 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 MED4Q9NPJ6 270 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 WWC3Q9ULE0 1092 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 A1BGP04217 495 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 ERCC5P28715 1186 aaPredicted RBP11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 EVA1CP58658 441 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 SSRP1Q08945 709 aaKnown RBP11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 GPATCH11Q8N954 259 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 CAPZA3Q96KX2 299 aa11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 TTF2Q9UNY4 1162 aaKnown RBP11.06□□□□□ -0.64
ARFGEF1-203ENST00000518230 SYNRGQ9UMZ2 1314 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 GGCXP38435 758 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 AMPD2Q01433 879 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 DPYDQ12882 1025 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 DNAJC21Q5F1R6 531 aaKnown RBP11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 TMEM67Q5HYA8 995 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 CCDC148Q8NFR7 591 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 MMS19Q96T76 1030 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 NUP88Q99567 741 aaPredicted RBP11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 ZBTB3Q9H5J0 574 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 YY1AP1Q9H869 796 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 HPCAL4Q9UM19 191 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 LIG3P49916 1009 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 CUL4BQ13620 913 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 TUBB2AQ13885 445 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 FILIP1LQ4L180 1135 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 WDR93Q6P2C0 686 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 CNGA4Q8IV77 575 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 ELOA2Q8IYF1 753 aaPredicted RBP11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 TUBB2BQ9BVA1 445 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 ACBD3Q9H3P7 528 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 LY9Q9HBG7 655 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 CABP5Q9NP86 173 aa11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 CWC25Q9NXE8 425 aaPredicted RBP11.05□□□□□ -0.64
ARFGEF1-203ENST00000518230 FAM205CA6NFA0 338 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 N4BP3O15049 544 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 MMP1P03956 469 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 ZFYP08048 801 aaPredicted RBP11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 MYBL2P10244 700 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 TAF7LQ5H9L4 462 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 CDKAL1Q5VV42 579 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 TRIML1Q8N9V2 468 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 SPATA20Q8TB22 786 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 ZKSCAN3Q9BRR0 538 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 DEF6Q9H4E7 631 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 ABHD10Q9NUJ1 306 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 GEMIN8Q9NWZ8 242 aaKnown RBP11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 ECM29Q5VYK3 1845 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 PPP1R3GB7ZBB8 358 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 EXOC5O00471 708 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 CCT5P48643 541 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 USP14P54578 494 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 SAFBQ15424 915 aaKnown RBP eCLIP11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 TADA2BQ86TJ2 420 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 TMTC1Q8IUR5 882 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 SMARCC1Q92922 1105 aaPredicted RBP11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 SRPRBQ9Y5M8 271 aaKnown RBP11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 CDHR2Q9BYE9 1310 aa11.04□□□□□ -0.64
ARFGEF1-203ENST00000518230 ATP1A1P05023 1023 aaKnown RBP11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 KRT9P35527 623 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 TUBB4BP68371 445 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 CTDSPL2Q05D32 466 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 STIM1Q13586 685 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 KRT31Q15323 416 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 TTC19Q6DKK2 380 aaPredicted RBP11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 EFCAB13Q8IY85 973 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 KAT2BQ92831 832 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 PAGE5Q96GU1 130 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 KAT14Q9H8E8 782 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 BRMS1Q9HCU9 246 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 TAB2Q9NYJ8 693 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 ZSWIM5Q9P217 1185 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 CTNND2Q9UQB3 1225 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 REXO2Q9Y3B8 237 aaKnown RBP11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 SLC12A7Q9Y666 1083 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 IFIT3O14879 490 aaKnown RBP11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 AARSP49588 968 aaKnown RBP eCLIP11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 BLZF1Q9H2G9 400 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 TACC3Q9Y6A5 838 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 WDR19Q8NEZ3 1342 aa11.03□□□□□ -0.64
ARFGEF1-203ENST00000518230 KCPQ6ZWJ8 1503 aa11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 A0A087WUV0 522 aaPredicted RBP11.02□□□□□ -0.64
ARFGEF1-203ENST00000518230 AGPSO00116 658 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms