RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 BCS1LQ9Y276 419 aa27.12■■□□□ 1.93
SLIT3-204ENST00000518140 NFKBIEO00221 500 aa27.11■■□□□ 1.93
SLIT3-204ENST00000518140 NT5C2P49902 561 aa27.11■■□□□ 1.93
SLIT3-204ENST00000518140 SH3BP5LQ7L8J4 393 aa27.11■■□□□ 1.93
SLIT3-204ENST00000518140 NIM1KQ8IY84 436 aa27.11■■□□□ 1.93
SLIT3-204ENST00000518140 USP28Q96RU2 1077 aa27.11■■□□□ 1.93
SLIT3-204ENST00000518140 TMEM47Q9BQJ4 181 aa27.11■■□□□ 1.93
SLIT3-204ENST00000518140 SCAND2PQ9GZW5 306 aaPredicted RBP27.11■■□□□ 1.93
SLIT3-204ENST00000518140 VPS33BQ9H267 617 aa27.11■■□□□ 1.93
SLIT3-204ENST00000518140 CSPP1Q1MSJ5 1256 aa27.1■■□□□ 1.93
SLIT3-204ENST00000518140 TMTC3Q6ZXV5 915 aa27.1■■□□□ 1.93
SLIT3-204ENST00000518140 GAS2L3Q86XJ1 694 aa27.1■■□□□ 1.93
SLIT3-204ENST00000518140 IDI2Q9BXS1 227 aa27.1■■□□□ 1.93
SLIT3-204ENST00000518140 RBM28Q9NW13 759 aaKnown RBP27.1■■□□□ 1.93
SLIT3-204ENST00000518140 SERPINB13Q9UIV8 391 aa27.1■■□□□ 1.93
SLIT3-204ENST00000518140 V9GY48 417 aaPredicted RBP27.1■■□□□ 1.93
SLIT3-204ENST00000518140 DDTLA6NHG4 134 aaPredicted RBP27.1■■□□□ 1.93
SLIT3-204ENST00000518140 ZSCAN23Q3MJ62 389 aa27.1■■□□□ 1.93
SLIT3-204ENST00000518140 DEXIO95424 95 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 AKR1B1P15121 316 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 PKN1Q16512 942 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 NLGN2Q8NFZ4 835 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 CTCFLQ8NI51 663 aaPredicted RBP27.09■■□□□ 1.93
SLIT3-204ENST00000518140 SHISA4Q96DD7 197 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 CEP95Q96GE4 821 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 TAOK3Q9H2K8 898 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 KCNJ14Q9UNX9 436 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 MTMR7Q9Y216 660 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 SHMT1P34896 483 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 CXCL9Q07325 125 aa27.09■■□□□ 1.93
SLIT3-204ENST00000518140 ECM29Q5VYK3 1845 aa27.08■■□□□ 1.93
SLIT3-204ENST00000518140 ELP1O95163 1332 aa27.08■■□□□ 1.93
SLIT3-204ENST00000518140 CCDC178Q5BJE1 867 aa27.08■■□□□ 1.93
SLIT3-204ENST00000518140 RASGRP2Q7LDG7 609 aa27.08■■□□□ 1.93
SLIT3-204ENST00000518140 STAG2Q8N3U4 1231 aa27.08■■□□□ 1.93
SLIT3-204ENST00000518140 RNF26Q9BY78 433 aaPredicted RBP27.08■■□□□ 1.93
SLIT3-204ENST00000518140 BRCA1P38398 1863 aaKnown RBP27.08■■□□□ 1.92
SLIT3-204ENST00000518140 WASF1Q92558 559 aa27.07■■□□□ 1.92
SLIT3-204ENST00000518140 PGBD1Q96JS3 809 aa27.07■■□□□ 1.92
SLIT3-204ENST00000518140 CFAP45Q9UL16 551 aa27.07■■□□□ 1.92
SLIT3-204ENST00000518140 FAM196BA6NMK8 535 aa27.07■■□□□ 1.92
SLIT3-204ENST00000518140 DNAJC18Q9H819 358 aa27.07■■□□□ 1.92
SLIT3-204ENST00000518140 PRPF3O43395 683 aaKnown RBP27.06■■□□□ 1.92
SLIT3-204ENST00000518140 TRIM29Q14134 588 aa27.06■■□□□ 1.92
SLIT3-204ENST00000518140 CLEC10AQ8IUN9 316 aa27.06■■□□□ 1.92
SLIT3-204ENST00000518140 RGS22Q8NE09 1264 aa27.06■■□□□ 1.92
SLIT3-204ENST00000518140 MYO3BQ8WXR4 1341 aa27.06■■□□□ 1.92
SLIT3-204ENST00000518140 HLA-DOAP06340 250 aa27.05■■□□□ 1.92
SLIT3-204ENST00000518140 PIBF1Q8WXW3 757 aa27.05■■□□□ 1.92
SLIT3-204ENST00000518140 PANK2Q9BZ23 570 aa27.05■■□□□ 1.92
SLIT3-204ENST00000518140 RRAGDQ9NQL2 400 aaPredicted RBP27.05■■□□□ 1.92
SLIT3-204ENST00000518140 BAZ2BQ9UIF8 2168 aaKnown RBP27.05■■□□□ 1.92
SLIT3-204ENST00000518140 RCOR1Q9UKL0 485 aa27.05■■□□□ 1.92
SLIT3-204ENST00000518140 PSME4Q14997 1843 aa27.05■■□□□ 1.92
SLIT3-204ENST00000518140 CNTNAP5Q8WYK1 1306 aa27.05■■□□□ 1.92
SLIT3-204ENST00000518140 VEGFAP15692 232 aaPredicted RBP27.05■■□□□ 1.92
SLIT3-204ENST00000518140 MYSM1Q5VVJ2 828 aa27.05■■□□□ 1.92
SLIT3-204ENST00000518140 ZSCAN29Q8IWY8 852 aaPredicted RBP27.05■■□□□ 1.92
SLIT3-204ENST00000518140 ZNF396Q96N95 335 aaPredicted RBP27.05■■□□□ 1.92
SLIT3-204ENST00000518140 MAD2L2Q9UI95 211 aa27.05■■□□□ 1.92
SLIT3-204ENST00000518140 SPDYE2BA6NHP3 402 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 SPDYE6P0CI01 402 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 PRELPP51888 382 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 AKAP17AQ02040 695 aaKnown RBP27.04■■□□□ 1.92
SLIT3-204ENST00000518140 BRAPQ7Z569 592 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 GRPEL1Q9HAV7 217 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.04■■□□□ 1.92
SLIT3-204ENST00000518140 SWAP70Q9UH65 585 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 CLIC4Q9Y696 253 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 NOVP48745 357 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 GRM4Q14833 912 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 SLC35G1Q2M3R5 365 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 VPS54Q9P1Q0 977 aa27.04■■□□□ 1.92
SLIT3-204ENST00000518140 CLRN2A0PK11 232 aa27.03■■□□□ 1.92
SLIT3-204ENST00000518140 BTBD18B2RXH4 712 aa27.03■■□□□ 1.92
SLIT3-204ENST00000518140 MMP1P03956 469 aa27.03■■□□□ 1.92
SLIT3-204ENST00000518140 U2AF2P26368 475 aaKnown RBP eCLIP27.03■■□□□ 1.92
SLIT3-204ENST00000518140 RASSF7Q02833 373 aa27.03■■□□□ 1.92
SLIT3-204ENST00000518140 MTMR4Q9NYA4 1195 aa27.03■■□□□ 1.92
SLIT3-204ENST00000518140 FER1L6Q2WGJ9 1857 aa27.03■■□□□ 1.92
SLIT3-204ENST00000518140 IGKV6D-41A0A0C4DH26 115 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 SHTN1A0MZ66 631 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 NPM3O75607 178 aaKnown RBP27.02■■□□□ 1.92
SLIT3-204ENST00000518140 EIF6P56537 245 aaKnown RBP27.02■■□□□ 1.92
SLIT3-204ENST00000518140 SHROOM1Q2M3G4 852 aaPredicted RBP27.02■■□□□ 1.92
SLIT3-204ENST00000518140 OGFOD1Q8N543 542 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 EHD4Q9H223 541 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 DHX36Q9H2U1 1008 aaKnown RBP27.02■■□□□ 1.92
SLIT3-204ENST00000518140 GOLGA8HP0CJ92 632 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 LIG1P18858 919 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 KIF5BP33176 963 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 DLGAP5Q15398 846 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 ATL3Q6DD88 541 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 JDP2Q8WYK2 163 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 MAP3K14Q99558 947 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 PI4KBQ9UBF8 816 aa27.02■■□□□ 1.92
SLIT3-204ENST00000518140 SYCE3A1L190 88 aa27.01■■□□□ 1.91
SLIT3-204ENST00000518140 OXER1Q8TDS5 423 aa27.01■■□□□ 1.91
SLIT3-204ENST00000518140 RTEL1Q9NZ71 1219 aa27.01■■□□□ 1.91
SLIT3-204ENST00000518140 MYH15Q9Y2K3 1946 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms