RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 PUS7LQ9H0K6 701 aaKnown RBP12.71□□□□□ -0.37
SPIDR-205ENST00000518060 SWAP70Q9UH65 585 aa12.71□□□□□ -0.37
SPIDR-205ENST00000518060 DDX60LQ5H9U9 1706 aaKnown RBP12.71□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L15C9J2P7 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L13C9JLJ4 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L11C9JVI0 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L21D6R901 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L18D6R9N7 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L22D6RA61 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L17D6RBQ6 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L19D6RCP7 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L20D6RJB6 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 APPP05067 770 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 AKR1B1P15121 316 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 VCAM1P19320 739 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 HOXA7P31268 230 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-205ENST00000518060 USP17L24Q0WX57 530 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 LRRFIP1Q32MZ4 808 aaKnown RBP12.7□□□□□ -0.38
SPIDR-205ENST00000518060 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-205ENST00000518060 OTUD7AQ8TE49 926 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-205ENST00000518060 GTF3C2Q8WUA4 911 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-205ENST00000518060 FSD1Q9BTV5 496 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 KIAA1683Q9H0B3 1180 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 UNC93B1Q9H1C4 597 aa12.7□□□□□ -0.38
SPIDR-205ENST00000518060 RPAP3Q9H6T3 665 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-205ENST00000518060 TNRC18O15417 2968 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-205ENST00000518060 RNF113AO15541 343 aaKnown RBP12.69□□□□□ -0.38
SPIDR-205ENST00000518060 RAD21O60216 631 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 MX1P20591 662 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 TDO2P48775 406 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 ICA1Q05084 483 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 IRF5Q13568 498 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 CLEC10AQ8IUN9 316 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 NKX2-3Q8TAU0 364 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 APPBP2Q92624 585 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 C12orf42Q96LP6 360 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 TANGO6Q9C0B7 1094 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 TXNRD2Q9NNW7 524 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 ARPP21Q9UBL0 812 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-205ENST00000518060 MORF4L1Q9UBU8 362 aa12.69□□□□□ -0.38
SPIDR-205ENST00000518060 TTC41PQ6P2S7 1318 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 MINDY4BA8MYZ0 360 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 SMIM22K7EJ46 135 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 GLRX3O76003 335 aaKnown RBP12.68□□□□□ -0.38
SPIDR-205ENST00000518060 ZFYP08048 801 aaPredicted RBP12.68□□□□□ -0.38
SPIDR-205ENST00000518060 CYP2B6P20813 491 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 MAPK4P31152 587 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 CDK8P49336 464 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 ERVK-24P63145 666 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 PXYLP1Q8TE99 480 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 STRBPQ96SI9 672 aaKnown RBP12.68□□□□□ -0.38
SPIDR-205ENST00000518060 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 RBPJLQ9UBG7 517 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 CENPFP49454 3210 aa12.68□□□□□ -0.38
SPIDR-205ENST00000518060 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 M0R2C6 588 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 GPAA1O43292 621 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 HMGCRP04035 888 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 GJB1P08034 283 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 CCNA1P78396 465 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 CTR9Q6PD62 1173 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 CATSPERGQ6ZRH7 1159 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 C16orf86Q6ZW13 317 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 SPICE1Q8N0Z3 855 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 SOCS4Q8WXH5 440 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 OSBP2Q969R2 916 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 DEFB118Q96PH6 123 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 NUDT12Q9BQG2 462 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 PORCNQ9H237 461 aa12.67□□□□□ -0.38
SPIDR-205ENST00000518060 RBBP6Q7Z6E9 1792 aaKnown RBP12.66□□□□□ -0.38
SPIDR-205ENST00000518060 MGAMO43451 1857 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 TFRCP02786 760 aaKnown RBP12.66□□□□□ -0.38
SPIDR-205ENST00000518060 ZKSCAN1P17029 563 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-205ENST00000518060 GJA8P48165 433 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 Q3C1V9 767 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 GPR142Q7Z601 462 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 PI4K2BQ8TCG2 481 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 U2AF1L4Q8WU68 220 aaKnown RBP12.66□□□□□ -0.38
SPIDR-205ENST00000518060 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 CCDC17Q96LX7 622 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 MKNK2Q9HBH9 465 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 RABGAP1Q9Y3P9 1069 aa12.66□□□□□ -0.38
SPIDR-205ENST00000518060 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
SPIDR-205ENST00000518060 GSG1L2A8MUP6 293 aa12.65□□□□□ -0.38
SPIDR-205ENST00000518060 FLOT1O75955 427 aa12.65□□□□□ -0.38
SPIDR-205ENST00000518060 FARP2O94887 1054 aaPredicted RBP12.65□□□□□ -0.38
SPIDR-205ENST00000518060 GNAT2P19087 354 aa12.65□□□□□ -0.38
SPIDR-205ENST00000518060 RGS2P41220 211 aa12.65□□□□□ -0.38
SPIDR-205ENST00000518060 DPF3Q92784 378 aa12.65□□□□□ -0.38
SPIDR-205ENST00000518060 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
SPIDR-205ENST00000518060 NACAP1Q9BZK3 213 aa12.65□□□□□ -0.38
SPIDR-205ENST00000518060 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms