RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SRBD1Q8N5C6 995 aaKnown RBP30.63■■■□□ 2.49
COL13A1-210ENST00000517713 SLC44A5Q8NCS7 719 aa30.63■■■□□ 2.49
COL13A1-210ENST00000517713 USP25Q9UHP3 1055 aa30.63■■■□□ 2.49
COL13A1-210ENST00000517713 ESPNB1AK53 854 aa30.63■■■□□ 2.49
COL13A1-210ENST00000517713 WDHD1O75717 1129 aaPredicted RBP30.63■■■□□ 2.49
COL13A1-210ENST00000517713 CMA1P23946 247 aa30.63■■■□□ 2.49
COL13A1-210ENST00000517713 CERS5Q8N5B7 392 aa30.63■■■□□ 2.49
COL13A1-210ENST00000517713 CNTNAP5Q8WYK1 1306 aa30.62■■■□□ 2.49
COL13A1-210ENST00000517713 CAMKK2Q96RR4 588 aa30.62■■■□□ 2.49
COL13A1-210ENST00000517713 VPS54Q9P1Q0 977 aa30.62■■■□□ 2.49
COL13A1-210ENST00000517713 hCG_1642624A0A1W2PR95 340 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 RASA1P20936 1047 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 KIF5BP33176 963 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 C16orf86Q6ZW13 317 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 USP17L3A6NCW0 530 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 USP17L4A6NCW7 530 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 F8W031 263 aaPredicted RBP30.61■■■□□ 2.49
COL13A1-210ENST00000517713 EN1Q05925 392 aaPredicted RBP30.61■■■□□ 2.49
COL13A1-210ENST00000517713 NR5A1Q13285 461 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 USP17L1Q7RTZ2 530 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 SHISA4Q96DD7 197 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 PHF20Q9BVI0 1012 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.61■■■□□ 2.49
COL13A1-210ENST00000517713 STK32BQ9NY57 414 aa30.61■■■□□ 2.49
COL13A1-210ENST00000517713 CDK8P49336 464 aa30.6■■■□□ 2.49
COL13A1-210ENST00000517713 TOB1P50616 345 aaPredicted RBP30.6■■■□□ 2.49
COL13A1-210ENST00000517713 RILPL1Q5EBL4 403 aa30.6■■■□□ 2.49
COL13A1-210ENST00000517713 PNMA1Q8ND90 353 aa30.6■■■□□ 2.49
COL13A1-210ENST00000517713 OXER1Q8TDS5 423 aa30.6■■■□□ 2.49
COL13A1-210ENST00000517713 QSER1Q2KHR3 1735 aa30.6■■■□□ 2.49
COL13A1-210ENST00000517713 TTF2Q9UNY4 1162 aaKnown RBP30.59■■■□□ 2.49
COL13A1-210ENST00000517713 MYH1P12882 1939 aa30.59■■■□□ 2.49
COL13A1-210ENST00000517713 FOCADQ5VW36 1801 aa30.58■■■□□ 2.49
COL13A1-210ENST00000517713 SDF4Q9BRK5 362 aa30.58■■■□□ 2.49
COL13A1-210ENST00000517713 MXD3Q9BW11 206 aa30.58■■■□□ 2.49
COL13A1-210ENST00000517713 PFKFB1P16118 471 aa30.57■■■□□ 2.49
COL13A1-210ENST00000517713 CBX8Q9HC52 389 aa30.57■■■□□ 2.49
COL13A1-210ENST00000517713 ADCY5O95622 1261 aa30.57■■■□□ 2.48
COL13A1-210ENST00000517713 CAVIN2O95810 425 aa30.57■■■□□ 2.48
COL13A1-210ENST00000517713 KRT2P35908 639 aa30.57■■■□□ 2.48
COL13A1-210ENST00000517713 CUTAO60888 179 aa30.56■■■□□ 2.48
COL13A1-210ENST00000517713 ZNF202O95125 648 aa30.56■■■□□ 2.48
COL13A1-210ENST00000517713 PODNQ7Z5L7 613 aa30.56■■■□□ 2.48
COL13A1-210ENST00000517713 LUZP1Q86V48 1076 aa30.56■■■□□ 2.48
COL13A1-210ENST00000517713 DNAJC25Q9H1X3 360 aa30.56■■■□□ 2.48
COL13A1-210ENST00000517713 SNED1Q8TER0 1413 aa30.55■■■□□ 2.48
COL13A1-210ENST00000517713 GRM4Q14833 912 aa30.55■■■□□ 2.48
COL13A1-210ENST00000517713 CABP5Q9NP86 173 aa30.55■■■□□ 2.48
COL13A1-210ENST00000517713 CCDC39Q9UFE4 941 aa30.55■■■□□ 2.48
COL13A1-210ENST00000517713 STX1AQ16623 288 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 SHC4Q6S5L8 630 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 DBNDD1Q9H9R9 158 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 BRMS1Q9HCU9 246 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 SCG2P13521 617 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 CHRNA5P30532 468 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 ZNF165P49910 485 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 ZSCAN30Q86W11 494 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 NEDD1Q8NHV4 660 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 CNKSR1Q969H4 720 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 TMEM47Q9BQJ4 181 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 STX8Q9UNK0 236 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 SLX4Q8IY92 1834 aa30.54■■■□□ 2.48
COL13A1-210ENST00000517713 SCNN1DP51172 638 aa30.53■■■□□ 2.48
COL13A1-210ENST00000517713 PLCB2Q00722 1185 aa30.53■■■□□ 2.48
COL13A1-210ENST00000517713 PICALMQ13492 652 aa30.53■■■□□ 2.48
COL13A1-210ENST00000517713 PFKFB3Q16875 520 aaPredicted RBP30.53■■■□□ 2.48
COL13A1-210ENST00000517713 KRI1Q8N9T8 703 aaKnown RBP30.53■■■□□ 2.48
COL13A1-210ENST00000517713 CLIC6Q96NY7 704 aa30.53■■■□□ 2.48
COL13A1-210ENST00000517713 HPSEQ9Y251 543 aa30.53■■■□□ 2.48
COL13A1-210ENST00000517713 GNAQP50148 359 aa30.52■■■□□ 2.48
COL13A1-210ENST00000517713 RESP18Q5W5W9 173 aa30.52■■■□□ 2.48
COL13A1-210ENST00000517713 HHIPL2Q6UWX4 724 aa30.52■■■□□ 2.48
COL13A1-210ENST00000517713 PCDHB6Q9Y5E3 794 aa30.52■■■□□ 2.48
COL13A1-210ENST00000517713 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.52■■■□□ 2.48
COL13A1-210ENST00000517713 FAM237AA0A1B0GTK4 181 aa30.52■■■□□ 2.48
COL13A1-210ENST00000517713 USP40Q9NVE5 1235 aa30.52■■■□□ 2.48
COL13A1-210ENST00000517713 ZNF219Q9P2Y4 722 aaPredicted RBP30.52■■■□□ 2.48
COL13A1-210ENST00000517713 MAD2L2Q9UI95 211 aa30.52■■■□□ 2.48
COL13A1-210ENST00000517713 CEP131Q9UPN4 1083 aa30.52■■■□□ 2.48
COL13A1-210ENST00000517713 AP5Z1O43299 807 aa30.51■■■□□ 2.47
COL13A1-210ENST00000517713 SYKP43405 635 aa30.51■■■□□ 2.47
COL13A1-210ENST00000517713 STAG2Q8N3U4 1231 aa30.51■■■□□ 2.47
COL13A1-210ENST00000517713 TEKT1Q969V4 418 aa30.51■■■□□ 2.47
COL13A1-210ENST00000517713 TIGD1Q96MW7 591 aa30.51■■■□□ 2.47
COL13A1-210ENST00000517713 PTMAP06454 111 aaKnown RBP30.5■■■□□ 2.47
COL13A1-210ENST00000517713 NPY5RQ15761 445 aa30.5■■■□□ 2.47
COL13A1-210ENST00000517713 PIBF1Q8WXW3 757 aa30.5■■■□□ 2.47
COL13A1-210ENST00000517713 KCNQ5Q9NR82 932 aa30.5■■■□□ 2.47
COL13A1-210ENST00000517713 ANO10Q9NW15 660 aa30.5■■■□□ 2.47
COL13A1-210ENST00000517713 KIAA1468Q9P260 1216 aa30.5■■■□□ 2.47
COL13A1-210ENST00000517713 ATP2B1P20020 1258 aa30.49■■■□□ 2.47
COL13A1-210ENST00000517713 ERCC4Q92889 916 aaPredicted RBP30.49■■■□□ 2.47
COL13A1-210ENST00000517713 DDX4Q9NQI0 724 aaKnown RBP30.49■■■□□ 2.47
COL13A1-210ENST00000517713 FBXO2Q9UK22 296 aaPredicted RBP30.49■■■□□ 2.47
COL13A1-210ENST00000517713 NOL7Q9UMY1 257 aaKnown RBP30.49■■■□□ 2.47
COL13A1-210ENST00000517713 FAM205CA6NFA0 338 aa30.48■■■□□ 2.47
COL13A1-210ENST00000517713 PTPREP23469 700 aa30.48■■■□□ 2.47
COL13A1-210ENST00000517713 CLCN1P35523 988 aa30.48■■■□□ 2.47
COL13A1-210ENST00000517713 NLRP5P59047 1200 aa30.48■■■□□ 2.47
COL13A1-210ENST00000517713 EARS2Q5JPH6 523 aaKnown RBP30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms