RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 SLC5A4Q9NY91 659 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MORF4L1Q9UBU8 362 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 SERPINB13Q9UIV8 391 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 FARP1Q9Y4F1 1045 aaPredicted RBP8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 NDUFB9Q9Y6M9 179 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CEP290O15078 2479 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MAGEB6P1A0A0J9YX57 407 aa8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 IFIT2P09913 472 aaKnown RBP8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 XRCC5P13010 732 aaKnown RBP8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DYNLL1P63167 89 aaKnown RBP8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 PLS1Q14651 629 aa8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 GPR142Q7Z601 462 aa8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CLASRPQ8N2M8 674 aaKnown RBP8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DIS3LQ8TF46 1054 aaKnown RBP8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CRNKL1Q9BZJ0 848 aaKnown RBP8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TANGO6Q9C0B7 1094 aa8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CRISPLD2Q9H0B8 497 aa8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MCM9Q9NXL9 1143 aa8.93□□□□□ -0.98
TNFRSF11B-202ENST00000517352 RFX7Q2KHR2 1363 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DLL1O00548 723 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MSCO60682 206 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 HMMRO75330 724 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TRIM32Q13049 653 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 SLC9C2Q5TAH2 1124 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TMED8Q6PL24 325 aaPredicted RBP8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 UBE2Q1Q7Z7E8 422 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DEFB123Q8N688 67 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ZNF384Q8TF68 577 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TRIB2Q92519 343 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ZNF512BQ96KM6 892 aaPredicted RBP8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DNAJC2Q99543 621 aaKnown RBP8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 APBA2Q99767 749 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 SENP6Q9GZR1 1112 aaPredicted RBP8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CHMP4BQ9H444 224 aaKnown RBP8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 SH2D4AQ9H788 454 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 PIH1D3Q9NQM4 214 aaKnown RBP8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 HOXC10Q9NYD6 342 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 GJD2Q9UKL4 321 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 RABGAP1Q9Y3P9 1069 aa8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CTDP1Q9Y5B0 961 aaPredicted RBP8.92□□□□□ -0.98
TNFRSF11B-202ENST00000517352 COL2A1P02458 1487 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TRIOBPQ9H2D6 2365 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CACNB2Q08289 660 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MAP2K5Q13163 448 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 RRP1BQ14684 758 aaKnown RBP8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ADGRA1Q86SQ6 560 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TDHQ8IZJ6 230 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ARRDC4Q8NCT1 418 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 SSH3Q8TE77 659 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 RPAP3Q9H6T3 665 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ARHGEF10LQ9HCE6 1279 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 EMILIN3Q9NT22 766 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 RBPJLQ9UBG7 517 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DBNLQ9UJU6 430 aaKnown RBP8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 OGDHLQ9ULD0 1010 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TNNQ9UQP3 1299 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 EXOC6BQ9Y2D4 811 aa8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF11B-202ENST00000517352 SLC15A5A6NIM6 579 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 KBTBD13C9JR72 458 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 PEX10O60683 326 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CCND3P30281 292 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 BMP8BP34820 402 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MAGEA10P43363 369 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ATN1P54259 1190 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MDM2Q00987 491 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 COG2Q14746 738 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 Q3C1V9 767 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 NCAPG2Q86XI2 1143 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 EAF2Q96CJ1 260 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 LRCH3Q96II8 777 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 KIAA1683Q9H0B3 1180 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 EHD4Q9H223 541 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 PORCNQ9H237 461 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TXNRD2Q9NNW7 524 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 IL1RAPL2Q9NP60 686 aa8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 PRDM5Q9NQX1 630 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 RBBP6Q7Z6E9 1792 aaKnown RBP8.9□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MYH13Q9UKX3 1938 aa8.9□□□□□ -0.99
TNFRSF11B-202ENST00000517352 GOLIM4O00461 696 aa8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 CD44P16070 742 aaKnown RBP8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 VCAM1P19320 739 aa8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 PTPREP23469 700 aa8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 CCL14Q16627 93 aa8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 TATDN1Q6P1N9 297 aa8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 CATSPERGQ6ZRH7 1159 aa8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 TLR7Q9NYK1 1049 aaKnown RBP8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SWAP70Q9UH65 585 aa8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 DDX20Q9UHI6 824 aaKnown RBP8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ISY1Q9ULR0 285 aaKnown RBP8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 ATP11BQ9Y2G3 1177 aa8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 NOP58Q9Y2X3 529 aaKnown RBP8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 MYH2Q9UKX2 1941 aa8.89□□□□□ -0.99
TNFRSF11B-202ENST00000517352 STRNO43815 780 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 FLOT1O75955 427 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 FCER1AP12319 257 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 CYP2C19P33261 490 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
TNFRSF11B-202ENST00000517352 JAG1P78504 1218 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms