RNA–Protein interactions for RNA: ENST00000516958.1

RNU6-250P-201, Transcript of RNA, U6 small nuclear 250, pseudogene, humanhuman

BASIC

Gene RNU6-250P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-250P-201ENST00000516958 RNF144AP50876 292 aaPredicted RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 HTRA3P83110 453 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 PTSQ03393 145 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 TSNAXIP1Q2TAA8 658 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 C11orf91Q3C1V1 193 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 CCDC184Q52MB2 194 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 DUSP27Q5VZP5 1158 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 OLFM4Q6UX06 510 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 DNAJC14Q6Y2X3 702 aaPredicted RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 KIF6Q6ZMV9 814 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 TMC4Q7Z404 712 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 SLC51AQ86UW1 340 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 LDHDQ86WU2 507 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 NPAS4Q8IUM7 802 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 SP8Q8IXZ3 490 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 CCDC146Q8IYE0 955 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 C16orf71Q8IYS4 520 aaPredicted RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 GPC2Q8N158 579 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 NGEFQ8N5V2 710 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 PLBD2Q8NHP8 589 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 XAGE3Q8WTP9 111 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 BHMTQ93088 406 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 GTPBP3Q969Y2 492 aaKnown RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 MRRFQ96E11 262 aaKnown RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 RBM17Q96I25 401 aaKnown RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 NSUN5Q96P11 429 aaKnown RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 ZIC5Q96T25 663 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 UTP14AQ9BVJ6 771 aaKnown RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 GRIP2Q9C0E4 1043 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 BRD7Q9NPI1 651 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 AAASQ9NRG9 546 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 ZNF277Q9NRM2 450 aaPredicted RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 MBIPQ9NS73 344 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 IFT57Q9NWB7 429 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 HYPKQ9NX55 129 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 CHPF2Q9P2E5 772 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 DBF4Q9UBU7 674 aaPredicted RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 VTI1BQ9UEU0 232 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 EGFL7Q9UHF1 273 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 ATP6V0A2Q9Y487 856 aa2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 DICER1Q9UPY3 1922 aaKnown RBP2.29□□□□□ -2.04
RNU6-250P-201ENST00000516958 NUP98P52948 1817 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 TIAM2Q8IVF5 1701 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 ZNF609O15014 1411 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 CNTNAP1P78357 1384 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 RTL9Q8NET4 1388 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 ABCC4O15439 1325 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 CDHR2Q9BYE9 1310 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 RASSF10A6NK89 507 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 FAM177BA6PVY3 158 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 TGFBR3LH3BV60 316 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 NPHP1O15259 732 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 GADD45BO75293 160 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 SASH3O75995 380 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 PCCAP05165 728 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 CYP2E1P05181 493 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 LDHBP07195 334 aaKnown RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 HCLS1P14317 486 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 NFKB1P19838 968 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 EIF2S2P20042 333 aaKnown RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 CDC25BP30305 580 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 EPHX2P34913 555 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 ARSDP51689 593 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 GNAI1P63096 354 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 CALD1Q05682 793 aaKnown RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 TYRO3Q06418 890 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 CXCL9Q07325 125 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 KIAA2012Q0VF49 1180 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 SFSWAPQ12872 951 aaKnown RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 GRAPQ13588 217 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 WDR43Q15061 677 aaKnown RBP eCLIP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 EAPPQ56P03 285 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 HFE2Q6ZVN8 426 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 USP50Q70EL3 339 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 ZNF438Q7Z4V0 828 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 BTLAQ7Z6A9 289 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 PNMA8AQ86V59 439 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 ZSCAN29Q8IWY8 852 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 ZNF295-AS1Q8N0V1 137 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 TSPYL6Q8N831 410 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 ZBTB38Q8NAP3 1195 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 C8orf58Q8NAV2 365 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 CCDC191Q8NCU4 936 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 SUPT20HQ8NEM7 779 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 C1orf216Q8TAB5 229 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 GRAPLQ8TC17 118 aaPredicted RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 RPGRQ92834 1020 aaKnown RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 HHIPL1Q96JK4 782 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 PNMA5Q96PV4 448 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 DUSP9Q99956 384 aaKnown RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 CHMP4AQ9BY43 222 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 ZCCHC2Q9C0B9 1178 aaKnown RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 NUCKS1Q9H1E3 243 aaKnown RBP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 MRS2Q9HD23 443 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 NPHS2Q9NP85 383 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 LATS2Q9NRM7 1088 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 GPRC5DQ9NZD1 345 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 TMEM63CQ9P1W3 806 aa2.28□□□□□ -2.04
RNU6-250P-201ENST00000516958 TRMT112Q9UI30 125 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms