RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ZNF423Q2M1K9 1284 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 PLEKHN1Q494U1 663 aaPredicted RBP0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 SYCE2Q6PIF2 218 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 Q6ZPA2 131 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 MFSD4AQ8N468 514 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 TPCN2Q8NHX9 752 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 CSRNP2Q9H175 543 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 PRDM5Q9NQX1 630 aaPredicted RBP0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 KLHL14Q9P2G3 628 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 LRFN2Q9ULH4 789 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 MAPK8IP1Q9UQF2 711 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 NOTCH4Q99466 2003 aa0.86□□□□□ -2.27
RNU6-542P-201ENST00000516405 POLR2AP24928 1970 aaKnown RBP0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 PATE3B3GLJ2 98 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 M0R2N6 131 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 PIK3CDO00329 1044 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 RAMP2O60895 175 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 LIG1P18858 919 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 KRTAP10-1P60331 282 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 EIF4G2P78344 907 aaKnown RBP eCLIP0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 FGD1P98174 961 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 ID3Q02535 119 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 PTH1RQ03431 593 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 FAM69CQ0P6D2 419 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 HP1BP3Q5SSJ5 553 aaPredicted RBP0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 FNDC7Q5VTL7 733 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 CCDC102BQ68D86 513 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 C22orf34Q6ZV56 151 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 TMC6Q7Z403 805 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 PRIMA1Q86XR5 153 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 PHF6Q8IWS0 365 aaKnown RBP eCLIP0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 DEPDC4Q8N2C3 294 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 SMARCC1Q92922 1105 aaPredicted RBP0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 GGNBP2Q9H3C7 697 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 ABI2Q9NYB9 513 aaPredicted RBP0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 CNTN3Q9P232 1028 aa0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 COL3A1P02461 1466 aaPredicted RBP0.85□□□□□ -2.27
RNU6-542P-201ENST00000516405 U2SURPO15042 1029 aaKnown RBP0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 SCRN1Q12765 414 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 SCARA3Q6AZY7 606 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 USP43Q70EL4 1123 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 UBE3DQ7Z6J8 389 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 CREG2Q8IUH2 290 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 SPPL2CQ8IUH8 684 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 IGDCC4Q8TDY8 1250 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 CORO1BQ9BR76 489 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 SEMA4AQ9H3S1 761 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 TCAF1Q9Y4C2 921 aa0.84□□□□□ -2.27
RNU6-542P-201ENST00000516405 KCNAB3O43448 404 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 ZNF862O60290 1169 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 NUDT3O95989 172 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 CBSLP0DN79 551 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 CBSP35520 551 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 CLDN10P78369 228 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 FOXO4P98177 505 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 TNK2Q07912 1038 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 VAC14Q08AM6 782 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 GRM2Q14416 872 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 PDE3AQ14432 1141 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 GAB4Q2WGN9 574 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 NRN1LQ496H8 165 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 SH3D19Q5HYK7 790 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 FAM26DQ5JW98 314 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 LGI4Q8N135 537 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 GPR150Q8NGU9 434 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 Q8TCH9 128 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 ASAP3Q8TDY4 903 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 OSMRQ99650 979 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 ZKSCAN3Q9BRR0 538 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 TTPALQ9BTX7 342 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 MMRN2Q9H8L6 949 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 TMEM63CQ9P1W3 806 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 PMF1-BGLAPU3KQ54 211 aa0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 TCF20Q9UGU0 1960 aaKnown RBP0.83□□□□□ -2.28
RNU6-542P-201ENST00000516405 METTL12A8MUP2 240 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 ABLIM1O14639 778 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 EIF4EBP3O60516 100 aaPredicted RBP0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 ZNF623O75123 536 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 ZMYND10O75800 440 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 DKK1O94907 266 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 ATF2P15336 505 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 RFX1P22670 979 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 ERVFRD-1P60508 538 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 CHRNEQ04844 493 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 NCOA4Q13772 614 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 USP39Q53GS9 565 aaKnown RBP0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 LCE1FQ5T754 118 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 OLFML2BQ68BL8 750 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 ETFBKMTQ8IXQ9 262 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 ADAMTS17Q8TE56 1095 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 EXTL1Q92935 676 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 MYO19Q96H55 970 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 CCDC86Q9H6F5 360 aaKnown RBP0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 ZFYVE1Q9HBF4 777 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 SSU72Q9NP77 194 aaKnown RBP0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 RNF7Q9UBF6 113 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 ADAM29Q9UKF5 820 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 PLA2G2DQ9UNK4 145 aa0.82□□□□□ -2.28
RNU6-542P-201ENST00000516405 FOXN1O15353 648 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms