RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 ARMT1Q9H993 441 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CPA4Q9UI42 421 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PTCH2Q9Y6C5 1203 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CENPFP49454 3210 aa7.19□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L15C9J2P7 530 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L13C9JLJ4 530 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L11C9JVI0 530 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L18D6R9N7 530 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L22D6RA61 530 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L17D6RBQ6 530 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L19D6RCP7 530 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L20D6RJB6 530 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 WDR46O15213 610 aaKnown RBP7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 RNF113AO15541 343 aaKnown RBP7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 FMNL1O95466 1100 aaPredicted RBP7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MAPK4P31152 587 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 GRK4P32298 578 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PDE1AP54750 535 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 HERVK_113P62684 666 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 UBXN2AP68543 259 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CCNA1P78396 465 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L24Q0WX57 530 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 RAB3GAP1Q15042 981 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CCDC84Q86UT8 332 aaPredicted RBP7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 TRMT44Q8IYL2 757 aaKnown RBP7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MB21D1Q8N884 522 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 RAET1EQ8TD07 263 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 STRBPQ96SI9 672 aaKnown RBP7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 OSBPL3Q9H4L5 887 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SLC4A4Q9Y6R1 1079 aa7.18□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PLXNB2O15031 1838 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L12C9JPN9 530 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 USP17L21D6R901 530 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SLC3A2P08195 630 aaKnown RBP7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SLURP2P0DP57 97 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PCP11498 1178 aaKnown RBP7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 TDO2P48775 406 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MFAP1P55081 439 aaKnown RBP7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SOX10P56693 466 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PRKCZQ05513 592 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ZMYM1Q5SVZ6 1142 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ANKRD45Q5TZF3 282 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ANKRD13CQ8N6S4 541 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 OSBP2Q969R2 916 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 TMEM106CQ9BVX2 250 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ARHGAP39Q9C0H5 1083 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 KANSL2Q9H9L4 492 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 EPB41L4AQ9HCS5 686 aaPredicted RBP7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 TMX2Q9Y320 296 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 RABGAP1Q9Y3P9 1069 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 RLFQ13129 1914 aa7.17□□□□□ -1.26
SCARNA18.1-201ENST00000516330 GSG1L2A8MUP6 293 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 HIP1O00291 1037 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MPHOSPH10O00566 681 aaKnown RBP7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 HMGCRP04035 888 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 XRCC5P13010 732 aaKnown RBP7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CTGFP29279 349 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 GUCY1A2P33402 732 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 COPB2P35606 906 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CDK8P49336 464 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ERVK-9P63128 1117 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ERVK-24P63145 666 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CAP1Q01518 475 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PDE4BQ07343 736 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SEPT2Q15019 361 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SLC4A8Q2Y0W8 1093 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 TSHZ3Q63HK5 1081 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CTR9Q6PD62 1173 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CHD1LQ86WJ1 897 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 GPRC5AQ8NFJ5 357 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 APBA2Q99767 749 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 NAPBQ9H115 298 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 VCPKMTQ9H867 229 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 GOPCQ9HD26 462 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 HELLSQ9NRZ9 838 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 EMILIN3Q9NT22 766 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 MYH4Q9Y623 1939 aa7.16□□□□□ -1.26
SCARNA18.1-201ENST00000516330 FRMPD3Q5JV73 1810 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SPDYE16A6NNV3 312 aaPredicted RBP7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PATL2C9JE40 543 aaKnown RBP7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 M0R2C6 588 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PRKAB2O43741 272 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 GJB1P08034 283 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 FLT3LGP49771 235 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 JAG1P78504 1218 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 NUCB1Q02818 461 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SHROOM1Q2M3G4 852 aaPredicted RBP7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 PRPF38BQ5VTL8 546 aaKnown RBP7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CATSPERGQ6ZRH7 1159 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 CCAR1Q8IX12 1150 aaKnown RBP7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SLC44A5Q8NCS7 719 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 SHCBP1Q8NEM2 672 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 NUDT12Q9BQG2 462 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 BCL11AQ9H165 835 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 RPAP3Q9H6T3 665 aaPredicted RBP7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 NYAP2Q9P242 653 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ANAPC4Q9UJX5 808 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 RAD50Q92878 1312 aa7.15□□□□□ -1.26
SCARNA18.1-201ENST00000516330 ADCY3O60266 1144 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms