RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 ITGB5P18084 799 aa5.75□□□□□ -1.49
CAST-242ENST00000515063 EIF4A3P38919 411 aaKnown RBP5.75□□□□□ -1.49
CAST-242ENST00000515063 CDKAL1Q5VV42 579 aa5.75□□□□□ -1.49
CAST-242ENST00000515063 ATG4DQ86TL0 474 aaPredicted RBP5.75□□□□□ -1.49
CAST-242ENST00000515063 WFDC3Q8IUB2 231 aa5.75□□□□□ -1.49
CAST-242ENST00000515063 TMEM87AQ8NBN3 555 aa5.75□□□□□ -1.49
CAST-242ENST00000515063 DPH2Q9BQC3 489 aaPredicted RBP5.75□□□□□ -1.49
CAST-242ENST00000515063 LRRC3Q9BY71 257 aa5.75□□□□□ -1.49
CAST-242ENST00000515063 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
CAST-242ENST00000515063 KCNQ5Q9NR82 932 aa5.75□□□□□ -1.49
CAST-242ENST00000515063 REV1Q9UBZ9 1251 aa5.75□□□□□ -1.49
CAST-242ENST00000515063 CEP131Q9UPN4 1083 aa5.75□□□□□ -1.49
CAST-242ENST00000515063 HTR3BO95264 441 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 TNNI2P48788 182 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 ZP2Q05996 745 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 CDH24Q86UP0 819 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 CCDC74BQ96LY2 380 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 HSPA12BQ96MM6 686 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 FMNL2Q96PY5 1086 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 PCGF6Q9BYE7 350 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 TRIT1Q9H3H1 467 aaKnown RBP5.74□□□□□ -1.49
CAST-242ENST00000515063 PODXL2Q9NZ53 605 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 KLHL3Q9UH77 587 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 KCNH3Q9ULD8 1083 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 CORINQ9Y5Q5 1042 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 CCDC88BA6NC98 1476 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 EEA1Q15075 1411 aa5.74□□□□□ -1.49
CAST-242ENST00000515063 H3BS24 57 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 RNASE1P07998 156 aaKnown RBP5.73□□□□□ -1.49
CAST-242ENST00000515063 GARTP22102 1010 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 ZNF76P36508 570 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 CD96P40200 585 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 TMPRSS7Q7RTY8 843 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 PHACTR4Q8IZ21 702 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 DNAJB8Q8NHS0 232 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 RIN3Q8TB24 985 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 METTL5Q9NRN9 209 aaKnown RBP5.73□□□□□ -1.49
CAST-242ENST00000515063 SEMA3GQ9NS98 782 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 MBNL3Q9NUK0 354 aaKnown RBP5.73□□□□□ -1.49
CAST-242ENST00000515063 ST14Q9Y5Y6 855 aa5.73□□□□□ -1.49
CAST-242ENST00000515063 RBM47A0AV96 593 aaKnown RBP5.72□□□□□ -1.49
CAST-242ENST00000515063 PRR33A8MZF0 331 aa5.72□□□□□ -1.49
CAST-242ENST00000515063 GRIN3BO60391 1043 aa5.72□□□□□ -1.49
CAST-242ENST00000515063 GREM1O60565 184 aa5.72□□□□□ -1.49
CAST-242ENST00000515063 APOBRQ0VD83 1088 aa5.72□□□□□ -1.49
CAST-242ENST00000515063 FBXL19Q6PCT2 694 aa5.72□□□□□ -1.49
CAST-242ENST00000515063 ZNF296Q8WUU4 475 aaPredicted RBP5.72□□□□□ -1.49
CAST-242ENST00000515063 RNF141Q8WVD5 230 aa5.72□□□□□ -1.49
CAST-242ENST00000515063 ASPNQ9BXN1 380 aa5.72□□□□□ -1.49
CAST-242ENST00000515063 COPRSQ9NQ92 184 aa5.72□□□□□ -1.49
CAST-242ENST00000515063 POLR3KQ9Y2Y1 108 aaPredicted RBP5.72□□□□□ -1.49
CAST-242ENST00000515063 TLR3O15455 904 aaKnown RBP5.71□□□□□ -1.5
CAST-242ENST00000515063 TNK2Q07912 1038 aa5.71□□□□□ -1.5
CAST-242ENST00000515063 REXO1Q8N1G1 1221 aaKnown RBP5.71□□□□□ -1.5
CAST-242ENST00000515063 LRRN4CLQ8ND94 238 aa5.71□□□□□ -1.5
CAST-242ENST00000515063 FLAD1Q8NFF5 587 aa5.71□□□□□ -1.5
CAST-242ENST00000515063 CARS2Q9HA77 564 aaKnown RBP5.71□□□□□ -1.5
CAST-242ENST00000515063 ATP13A1Q9HD20 1204 aa5.71□□□□□ -1.5
CAST-242ENST00000515063 GPATCH2Q9NW75 528 aa5.71□□□□□ -1.5
CAST-242ENST00000515063 ADAMTS6Q9UKP5 1117 aa5.71□□□□□ -1.5
CAST-242ENST00000515063 UPK3BL1B0FP48 263 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 UPK3BL2E5RIL1 263 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 ATE1O95260 518 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 PAPLNO95428 1278 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 RAG1P15918 1043 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 ZEB1P37275 1124 aaPredicted RBP5.7□□□□□ -1.5
CAST-242ENST00000515063 ZNF165P49910 485 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 RNF4P78317 190 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 LRRFIP1Q32MZ4 808 aaKnown RBP5.7□□□□□ -1.5
CAST-242ENST00000515063 KIAA0825Q8IV33 1275 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 FBXO27Q8NI29 283 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 UBE2FQ969M7 185 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 SYTL4Q96C24 671 aaPredicted RBP5.7□□□□□ -1.5
CAST-242ENST00000515063 NT5C1AQ9BXI3 368 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 GMIPQ9P107 970 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 ZSWIM5Q9P217 1185 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 PCDHB14Q9Y5E9 798 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 CNTNAP4Q9C0A0 1308 aa5.7□□□□□ -1.5
CAST-242ENST00000515063 VAMP1P23763 118 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 GBP1P32455 592 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 AFMP43652 599 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 RAD51AP2Q09MP3 1159 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 PPP1R13LQ8WUF5 828 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 SPON2Q9BUD6 331 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 BACH2Q9BYV9 841 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 GPR62Q9BZJ7 368 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.69□□□□□ -1.5
CAST-242ENST00000515063 ASCC2Q9H1I8 757 aaPredicted RBP5.69□□□□□ -1.5
CAST-242ENST00000515063 BRMS1Q9HCU9 246 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 ADAMTS1Q9UHI8 967 aa5.69□□□□□ -1.5
CAST-242ENST00000515063 CHURC1-FNTBB4DL54 471 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 RGS13O14921 159 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 RAC2P15153 192 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 MCM4P33991 863 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 CCNFP41002 786 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 SEZ6Q53EL9 994 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 DTWD2Q8NBA8 298 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 FAM168AQ92567 244 aa5.68□□□□□ -1.5
CAST-242ENST00000515063 NKD1Q969G9 470 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms