RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 USP17L15C9J2P7 530 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP17L13C9JLJ4 530 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP17L11C9JVI0 530 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP17L18D6R9N7 530 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP17L22D6RA61 530 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP17L17D6RBQ6 530 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP17L19D6RCP7 530 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP17L20D6RJB6 530 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 DLL1O00548 723 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 CNMDO75829 334 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP5P45974 858 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 CCNA1P78396 465 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP17L24Q0WX57 530 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 MIGA1Q8NAN2 632 aa27.88■■■□□ 2.05
SMAD1-214ENST00000514831 CWC22Q9HCG8 908 aaKnown RBP27.88■■■□□ 2.05
SMAD1-214ENST00000514831 USP14P54578 494 aa27.87■■■□□ 2.05
SMAD1-214ENST00000514831 ZYXQ15942 572 aaKnown RBP27.87■■■□□ 2.05
SMAD1-214ENST00000514831 DEFB123Q8N688 67 aa27.87■■■□□ 2.05
SMAD1-214ENST00000514831 UBE2OQ9C0C9 1292 aaKnown RBP27.87■■■□□ 2.05
SMAD1-214ENST00000514831 KIAA1683Q9H0B3 1180 aa27.87■■■□□ 2.05
SMAD1-214ENST00000514831 C1orf115Q9H7X2 142 aa27.87■■■□□ 2.05
SMAD1-214ENST00000514831 GLRX3O76003 335 aaKnown RBP27.86■■■□□ 2.05
SMAD1-214ENST00000514831 LRRC26Q2I0M4 334 aa27.86■■■□□ 2.05
SMAD1-214ENST00000514831 TMED8Q6PL24 325 aaPredicted RBP27.86■■■□□ 2.05
SMAD1-214ENST00000514831 LBX2Q6XYB7 198 aa27.86■■■□□ 2.05
SMAD1-214ENST00000514831 EAF2Q96CJ1 260 aaPredicted RBP27.86■■■□□ 2.05
SMAD1-214ENST00000514831 ZNF236Q9UL36 1845 aa27.85■■■□□ 2.05
SMAD1-214ENST00000514831 VCAM1P19320 739 aa27.85■■■□□ 2.05
SMAD1-214ENST00000514831 CATSPERGQ6ZRH7 1159 aa27.85■■■□□ 2.05
SMAD1-214ENST00000514831 MAGEB6Q8N7X4 407 aa27.85■■■□□ 2.05
SMAD1-214ENST00000514831 CCDC8Q9H0W5 538 aaPredicted RBP27.85■■■□□ 2.05
SMAD1-214ENST00000514831 RAB3GAP1Q15042 981 aa27.84■■■□□ 2.05
SMAD1-214ENST00000514831 TTC6Q86TZ1 520 aa27.84■■■□□ 2.05
SMAD1-214ENST00000514831 EDC3Q96F86 508 aaKnown RBP27.84■■■□□ 2.05
SMAD1-214ENST00000514831 SLC15A5A6NIM6 579 aa27.83■■■□□ 2.05
SMAD1-214ENST00000514831 ABCB5Q2M3G0 1257 aa27.83■■■□□ 2.05
SMAD1-214ENST00000514831 CERKLQ49MI3 558 aaPredicted RBP27.83■■■□□ 2.05
SMAD1-214ENST00000514831 MFSD14CQ5VZR4 134 aa27.83■■■□□ 2.05
SMAD1-214ENST00000514831 Q7L0L9 218 aa27.83■■■□□ 2.05
SMAD1-214ENST00000514831 FLRT1Q9NZU1 646 aa27.83■■■□□ 2.05
SMAD1-214ENST00000514831 A0A0G2JMZ2 1700 aa27.83■■■□□ 2.05
SMAD1-214ENST00000514831 HOXC6P09630 235 aa27.82■■■□□ 2.04
SMAD1-214ENST00000514831 PTPREP23469 700 aa27.82■■■□□ 2.04
SMAD1-214ENST00000514831 MAP3K12Q12852 859 aa27.82■■■□□ 2.04
SMAD1-214ENST00000514831 FTSJ3Q8IY81 847 aaKnown RBP27.82■■■□□ 2.04
SMAD1-214ENST00000514831 ACER1Q8TDN7 264 aa27.82■■■□□ 2.04
SMAD1-214ENST00000514831 STXBP5LQ9Y2K9 1186 aa27.82■■■□□ 2.04
SMAD1-214ENST00000514831 SHMT1P34896 483 aa27.81■■■□□ 2.04
SMAD1-214ENST00000514831 GRB14Q14449 540 aa27.81■■■□□ 2.04
SMAD1-214ENST00000514831 WDR78Q5VTH9 848 aa27.81■■■□□ 2.04
SMAD1-214ENST00000514831 ANTXR1Q9H6X2 564 aa27.81■■■□□ 2.04
SMAD1-214ENST00000514831 MTMR10Q9NXD2 777 aa27.81■■■□□ 2.04
SMAD1-214ENST00000514831 BTBD7Q9P203 1132 aa27.81■■■□□ 2.04
SMAD1-214ENST00000514831 NDUFB9Q9Y6M9 179 aa27.81■■■□□ 2.04
SMAD1-214ENST00000514831 SPDYE16A6NNV3 312 aaPredicted RBP27.8■■■□□ 2.04
SMAD1-214ENST00000514831 MSCO60682 206 aa27.8■■■□□ 2.04
SMAD1-214ENST00000514831 ITPRIPQ8IWB1 547 aa27.8■■■□□ 2.04
SMAD1-214ENST00000514831 RIOK1Q9BRS2 568 aaKnown RBP27.8■■■□□ 2.04
SMAD1-214ENST00000514831 CABP5Q9NP86 173 aa27.8■■■□□ 2.04
SMAD1-214ENST00000514831 DDX20Q9UHI6 824 aaKnown RBP27.8■■■□□ 2.04
SMAD1-214ENST00000514831 IVNS1ABPQ9Y6Y0 642 aa27.8■■■□□ 2.04
SMAD1-214ENST00000514831 LTBP2Q14767 1821 aa27.79■■■□□ 2.04
SMAD1-214ENST00000514831 RPAP3Q9H6T3 665 aaPredicted RBP27.79■■■□□ 2.04
SMAD1-214ENST00000514831 RLFQ13129 1914 aa27.79■■■□□ 2.04
SMAD1-214ENST00000514831 GUCY1A2P33402 732 aa27.78■■■□□ 2.04
SMAD1-214ENST00000514831 PLCD1P51178 756 aa27.78■■■□□ 2.04
SMAD1-214ENST00000514831 MDM2Q00987 491 aaPredicted RBP27.78■■■□□ 2.04
SMAD1-214ENST00000514831 MYH8P13535 1937 aa27.77■■■□□ 2.04
SMAD1-214ENST00000514831 RLBP1P12271 317 aa27.77■■■□□ 2.04
SMAD1-214ENST00000514831 ATP2B2Q01814 1243 aa27.77■■■□□ 2.04
SMAD1-214ENST00000514831 GABPAQ06546 454 aa27.77■■■□□ 2.04
SMAD1-214ENST00000514831 NPLOC4Q8TAT6 608 aa27.77■■■□□ 2.04
SMAD1-214ENST00000514831 LPAR1Q92633 364 aa27.77■■■□□ 2.04
SMAD1-214ENST00000514831 SENP6Q9GZR1 1112 aaPredicted RBP27.77■■■□□ 2.04
SMAD1-214ENST00000514831 IGHA2P01877 340 aa27.76■■■□□ 2.03
SMAD1-214ENST00000514831 CEP85Q6P2H3 762 aa27.76■■■□□ 2.03
SMAD1-214ENST00000514831 ERC1Q8IUD2 1116 aa27.76■■■□□ 2.03
SMAD1-214ENST00000514831 DNM1LO00429 736 aa27.75■■■□□ 2.03
SMAD1-214ENST00000514831 AACSQ86V21 672 aa27.75■■■□□ 2.03
SMAD1-214ENST00000514831 MAGEB6P1A0A0J9YX57 407 aa27.74■■■□□ 2.03
SMAD1-214ENST00000514831 POLR3DP05423 398 aaPredicted RBP27.74■■■□□ 2.03
SMAD1-214ENST00000514831 CYBAP13498 195 aa27.74■■■□□ 2.03
SMAD1-214ENST00000514831 CNGA1P29973 690 aa27.74■■■□□ 2.03
SMAD1-214ENST00000514831 CYP2C19P33261 490 aa27.74■■■□□ 2.03
SMAD1-214ENST00000514831 SEPT2Q15019 361 aa27.74■■■□□ 2.03
SMAD1-214ENST00000514831 CUL9Q8IWT3 2517 aa27.74■■■□□ 2.03
SMAD1-214ENST00000514831 PARP14Q460N5 1801 aa27.74■■■□□ 2.03
SMAD1-214ENST00000514831 TTF1Q15361 905 aaPredicted RBP27.73■■■□□ 2.03
SMAD1-214ENST00000514831 TRPV1Q8NER1 839 aa27.73■■■□□ 2.03
SMAD1-214ENST00000514831 CRNKL1Q9BZJ0 848 aaKnown RBP27.73■■■□□ 2.03
SMAD1-214ENST00000514831 EXOC6BQ9Y2D4 811 aa27.73■■■□□ 2.03
SMAD1-214ENST00000514831 OLFML2BQ68BL8 750 aa27.72■■■□□ 2.03
SMAD1-214ENST00000514831 LBHD1Q9BQE6 289 aaPredicted RBP27.72■■■□□ 2.03
SMAD1-214ENST00000514831 MOV10L1Q9BXT6 1211 aaKnown RBP27.72■■■□□ 2.03
SMAD1-214ENST00000514831 A0A1W2PRG0 241 aa27.71■■■□□ 2.03
SMAD1-214ENST00000514831 PDE6AP16499 860 aa27.71■■■□□ 2.03
SMAD1-214ENST00000514831 ADORA2AP29274 412 aa27.71■■■□□ 2.03
SMAD1-214ENST00000514831 COG2Q14746 738 aa27.71■■■□□ 2.03
SMAD1-214ENST00000514831 SHCBP1Q8NEM2 672 aa27.71■■■□□ 2.03
SMAD1-214ENST00000514831 MCM9Q9NXL9 1143 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms