RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 DHTKD1Q96HY7 919 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 ANKRD30AQ9BXX3 1397 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 ERLIN1O75477 346 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 MBD4O95243 580 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 VIL1P09327 827 aaKnown RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 GZMAP12544 262 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 CCNCP24863 283 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 CDC25CP30307 473 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 TUFMP49411 452 aaKnown RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 PKN2Q16513 984 aaKnown RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 GBP6Q6ZN66 633 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 TXLNBQ8N3L3 684 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 SPDYE1Q8NFV5 336 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 TCP11Q8WWU5 503 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 RIC8AQ9NPQ8 531 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 USP32Q8NFA0 1604 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 BCL9LQ86UU0 1499 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 ABCC5O15440 1437 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 C2orf81A6NN90 581 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 SART1O43290 800 aaKnown RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 SLC4A1P02730 911 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 ALOX15P16050 662 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 ENDOUP21128 410 aaKnown RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 HPDP32754 393 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 BTG3Q14201 252 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 LRRC41Q15345 812 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 Q4G0T1 1027 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 RNF20Q5VTR2 975 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 CAPRIN2Q6IMN6 1127 aaKnown RBP8.19□□□□□ -1.1
NIPBL-208ENST00000514335 LRRC49Q8IUZ0 686 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 CCDC114Q96M63 670 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 TRIM4Q9C037 500 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 RTEL1Q9NZ71 1219 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 PCSK1NQ9UHG2 260 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 SQORQ9Y6N5 450 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 WNK3Q9BYP7 1800 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 RGS12O14924 1447 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 BLMP54132 1417 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-208ENST00000514335 GEMIN4P57678 1058 aaKnown RBP8.18□□□□□ -1.1
NIPBL-208ENST00000514335 BPHLQ86WA6 291 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-208ENST00000514335 NUTM1Q86Y26 1132 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 FAM76AQ8TAV0 307 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 PARD6BQ9BYG5 372 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 RIMKLBQ9ULI2 386 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 TMEM94Q12767 1356 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 LRRC72A6NJI9 287 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 MUSKO15146 869 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 CEBPAP49715 358 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-208ENST00000514335 NEDD9Q14511 834 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 SMYD1Q8NB12 490 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 APPBP2Q92624 585 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 UPF1Q92900 1129 aaKnown RBP eCLIP8.18□□□□□ -1.1
NIPBL-208ENST00000514335 SYNCQ9H7C4 482 aa8.18□□□□□ -1.1
NIPBL-208ENST00000514335 RIMS2Q9UQ26 1411 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 ITSN1Q15811 1721 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 SPDYE3A6NKU9 549 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 F8W031 263 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-208ENST00000514335 GOLGA6L19H0YKK7 550 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 FIBPO43427 364 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 OPA1O60313 960 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 SKAP2O75563 359 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-208ENST00000514335 RLBP1P12271 317 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 TRAPPC10P48553 1259 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 POLA2Q14181 598 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 TTC39AQ5SRH9 613 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 CFAP70Q5T0N1 1121 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 ALPK1Q96QP1 1244 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 CCDC39Q9UFE4 941 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 MAGED1Q9Y5V3 778 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-208ENST00000514335 LRPPRCP42704 1394 aaKnown RBP8.17□□□□□ -1.1
NIPBL-208ENST00000514335 UBA7P41226 1012 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 COPAP53621 1224 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 LAPTM5Q13571 262 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 CCDC152Q4G0S7 254 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 LRRC43Q8N309 656 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 WHAMMQ8TF30 809 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 HVCN1Q96D96 273 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 SERINC2Q96SA4 455 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 ENAMQ9NRM1 1142 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 FAM53CQ9NYF3 392 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 RGL1Q9NZL6 768 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.17□□□□□ -1.1
NIPBL-208ENST00000514335 DAAM1Q9Y4D1 1078 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 SLIT2O94813 1529 aa8.17□□□□□ -1.1
NIPBL-208ENST00000514335 PNPLA6Q8IY17 1366 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 SGSM2O43147 1006 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 BPNT1O95861 308 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 PCP11498 1178 aaKnown RBP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 MICALCLQ6ZW33 695 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 GBP7Q8N8V2 638 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 RTF1Q92541 710 aaKnown RBP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 PLEKHA5Q9HAU0 1116 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 HELLSQ9NRZ9 838 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 ANKARQ7Z5J8 1434 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 BHMG1C9JSJ3 638 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 FOXN3O00409 490 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 CAVIN2O95810 425 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 CPP00450 1065 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 C7P10643 843 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms