RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 USP17L5A8MUK1 530 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 EEF2P13639 858 aaKnown RBP13.39□□□□□ -0.27
HTT-213ENST00000513806 ANTXR2P58335 489 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 ICA1Q05084 483 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 SPP2Q13103 211 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 KIAA1755Q5JYT7 1200 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 TMEM179Q6ZVK1 233 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 NEDD1Q8NHV4 660 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 BACH2Q9BYV9 841 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
HTT-213ENST00000513806 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 CEP350Q5VT06 3117 aa13.39□□□□□ -0.27
HTT-213ENST00000513806 WDR33Q9C0J8 1336 aaKnown RBP13.39□□□□□ -0.27
HTT-213ENST00000513806 PLIN4Q96Q06 1357 aa13.38□□□□□ -0.27
HTT-213ENST00000513806 PPIL2Q13356 520 aa13.38□□□□□ -0.27
HTT-213ENST00000513806 MTMR2Q13614 643 aa13.38□□□□□ -0.27
HTT-213ENST00000513806 MB21D2Q8IYB1 491 aaPredicted RBP13.38□□□□□ -0.27
HTT-213ENST00000513806 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
HTT-213ENST00000513806 NCOA7Q8NI08 942 aa13.38□□□□□ -0.27
HTT-213ENST00000513806 ESR2Q92731 530 aa13.38□□□□□ -0.27
HTT-213ENST00000513806 KCNB2Q92953 911 aa13.38□□□□□ -0.27
HTT-213ENST00000513806 JAKMIP1Q96N16 626 aaKnown RBP13.38□□□□□ -0.27
HTT-213ENST00000513806 ZNF287Q9HBT7 754 aa13.38□□□□□ -0.27
HTT-213ENST00000513806 CLIP2Q9UDT6 1046 aa13.38□□□□□ -0.27
HTT-213ENST00000513806 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
HTT-213ENST00000513806 RAD21O60216 631 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 HMGCS2P54868 508 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 KIF23Q02241 960 aaPredicted RBP13.37□□□□□ -0.27
HTT-213ENST00000513806 PPATQ06203 517 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 TRDNQ13061 729 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 RNF20Q5VTR2 975 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
HTT-213ENST00000513806 ZNF280CQ8ND82 737 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 HHIPL1Q96JK4 782 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 MS4A4AQ96JQ5 239 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 KRT23Q9C075 422 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 MTMR4Q9NYA4 1195 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 THSD7BQ9C0I4 1608 aa13.37□□□□□ -0.27
HTT-213ENST00000513806 MOGSQ13724 837 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 RCSD1Q6JBY9 416 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 SPICE1Q8N0Z3 855 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 BRI3BPQ8WY22 251 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 NEK1Q96PY6 1258 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 FEZ1Q99689 392 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 WDR18Q9BV38 432 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 UPF3BQ9BZI7 483 aaKnown RBP13.36□□□□□ -0.27
HTT-213ENST00000513806 CNNM2Q9H8M5 875 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 STX8Q9UNK0 236 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 COL11A1P12107 1806 aaPredicted RBP13.36□□□□□ -0.27
HTT-213ENST00000513806 TNKSO95271 1327 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 PCNTO95613 3336 aa13.36□□□□□ -0.27
HTT-213ENST00000513806 CCL15-CCL14A0A0B4J2E2 113 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 UNCXA6NJT0 531 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 PRC1O43663 620 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
HTT-213ENST00000513806 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
HTT-213ENST00000513806 MCCP23508 829 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 CCL15Q16663 113 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 TREML2Q5T2D2 321 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 RAB11FIP4Q86YS3 637 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 ENAHQ8N8S7 591 aaPredicted RBP13.35□□□□□ -0.27
HTT-213ENST00000513806 ZSCAN10Q96SZ4 725 aaPredicted RBP13.35□□□□□ -0.27
HTT-213ENST00000513806 NUP88Q99567 741 aaPredicted RBP13.35□□□□□ -0.27
HTT-213ENST00000513806 PTPN18Q99952 460 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 C22orf23Q9BZE7 217 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 KANSL2Q9H9L4 492 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 AS3MTQ9HBK9 375 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 EMILIN3Q9NT22 766 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 KCNH4Q9UQ05 1017 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 RLFQ13129 1914 aa13.35□□□□□ -0.27
HTT-213ENST00000513806 A0A0G2JLL6 359 aaPredicted RBP13.34□□□□□ -0.27
HTT-213ENST00000513806 USP17L10C9JJH3 530 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 IGF2BP3O00425 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
HTT-213ENST00000513806 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
HTT-213ENST00000513806 TTLL1O95922 423 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 ZBTB48P10074 688 aaPredicted RBP13.34□□□□□ -0.27
HTT-213ENST00000513806 PCP11498 1178 aaKnown RBP13.34□□□□□ -0.27
HTT-213ENST00000513806 BACE1P56817 501 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 SEC23AQ15436 765 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 TSGA10IPQ3SY00 556 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 PRRT2Q7Z6L0 340 aaPredicted RBP13.34□□□□□ -0.27
HTT-213ENST00000513806 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 LARP6Q9BRS8 491 aaKnown RBP13.34□□□□□ -0.27
HTT-213ENST00000513806 UBAC1Q9BSL1 405 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 ARHGEF10LQ9HCE6 1279 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 GINM1Q9NU53 330 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 NYAP2Q9P242 653 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
HTT-213ENST00000513806 BAZ2BQ9UIF8 2168 aaKnown RBP13.34□□□□□ -0.27
HTT-213ENST00000513806 BTBD19C9JJ37 291 aa13.33□□□□□ -0.28
HTT-213ENST00000513806 CXCL11O14625 94 aa13.33□□□□□ -0.28
HTT-213ENST00000513806 EPB41L2O43491 1005 aaKnown RBP13.33□□□□□ -0.28
HTT-213ENST00000513806 GTF2A2P52657 109 aa13.33□□□□□ -0.28
HTT-213ENST00000513806 EXOSC10Q01780 885 aaKnown RBP13.33□□□□□ -0.28
HTT-213ENST00000513806 SNAPC2Q13487 334 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms