RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 XRCC5P13010 732 aaKnown RBP8.79□□□□□ -1
HTT-212ENST00000513639 SHMT1P34896 483 aa8.79□□□□□ -1
HTT-212ENST00000513639 ADD2P35612 726 aa8.79□□□□□ -1
HTT-212ENST00000513639 MTFR1Q15390 333 aa8.79□□□□□ -1
HTT-212ENST00000513639 CATSPERGQ6ZRH7 1159 aa8.79□□□□□ -1
HTT-212ENST00000513639 C12orf42Q96LP6 360 aa8.79□□□□□ -1
HTT-212ENST00000513639 CCDC17Q96LX7 622 aa8.79□□□□□ -1
HTT-212ENST00000513639 DCP1AQ9NPI6 582 aaPredicted RBP8.79□□□□□ -1
HTT-212ENST00000513639 RBPJLQ9UBG7 517 aa8.79□□□□□ -1
HTT-212ENST00000513639 ZBTB47Q9UFB7 747 aaPredicted RBP8.79□□□□□ -1
HTT-212ENST00000513639 GJD2Q9UKL4 321 aa8.79□□□□□ -1
HTT-212ENST00000513639 RABGAP1Q9Y3P9 1069 aa8.79□□□□□ -1
HTT-212ENST00000513639 BRCA2P51587 3418 aa8.79□□□□□ -1
HTT-212ENST00000513639 MPHOSPH10O00566 681 aaKnown RBP8.78□□□□□ -1
HTT-212ENST00000513639 INHAP05111 366 aa8.78□□□□□ -1
HTT-212ENST00000513639 ZFYP08048 801 aaPredicted RBP8.78□□□□□ -1
HTT-212ENST00000513639 GABPAQ06546 454 aa8.78□□□□□ -1
HTT-212ENST00000513639 COG2Q14746 738 aa8.78□□□□□ -1
HTT-212ENST00000513639 TMEM179Q6ZVK1 233 aa8.78□□□□□ -1
HTT-212ENST00000513639 IFNLR1Q8IU57 520 aaPredicted RBP8.78□□□□□ -1
HTT-212ENST00000513639 DPF3Q92784 378 aa8.78□□□□□ -1
HTT-212ENST00000513639 NUDT12Q9BQG2 462 aa8.78□□□□□ -1
HTT-212ENST00000513639 HTATIP2Q9BUP3 242 aa8.78□□□□□ -1
HTT-212ENST00000513639 SH2D4AQ9H788 454 aa8.78□□□□□ -1
HTT-212ENST00000513639 ARMT1Q9H993 441 aa8.78□□□□□ -1
HTT-212ENST00000513639 CWC22Q9HCG8 908 aaKnown RBP8.78□□□□□ -1
HTT-212ENST00000513639 USP17L12C9JPN9 530 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 USP17L21D6R901 530 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 ERC2O15083 957 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 SMARCA5O60264 1052 aaPredicted RBP8.77□□□□□ -1.01
HTT-212ENST00000513639 MBD4O95243 580 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 HMGCRP04035 888 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 ELNP15502 786 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 GNAT2P19087 354 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 ERVK-9P63128 1117 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 ERVK-24P63145 666 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 AAMPQ13685 434 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 SEPT2Q15019 361 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 C12orf60Q5U649 245 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 GIMAP6Q6P9H5 292 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 PLEKHH3Q7Z736 793 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 LCORLQ8N3X6 602 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 U2AF1L4Q8WU68 220 aaKnown RBP8.77□□□□□ -1.01
HTT-212ENST00000513639 SDR42E1Q8WUS8 393 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 SOCS4Q8WXH5 440 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 EDC3Q96F86 508 aaKnown RBP8.77□□□□□ -1.01
HTT-212ENST00000513639 UNC93B1Q9H1C4 597 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 ZNF287Q9HBT7 754 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 ARHGEF10LQ9HCE6 1279 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 HMX1Q9NP08 348 aaPredicted RBP8.77□□□□□ -1.01
HTT-212ENST00000513639 NR2E3Q9Y5X4 410 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 SLC4A4Q9Y6R1 1079 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 RPTORQ8N122 1335 aa8.77□□□□□ -1.01
HTT-212ENST00000513639 DOCK2Q92608 1830 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 RNF113AO15541 343 aaKnown RBP8.76□□□□□ -1.01
HTT-212ENST00000513639 STRNO43815 780 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 CYP2B6P20813 491 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 RGS2P41220 211 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 ZYXQ15942 572 aaKnown RBP8.76□□□□□ -1.01
HTT-212ENST00000513639 SHROOM1Q2M3G4 852 aaPredicted RBP8.76□□□□□ -1.01
HTT-212ENST00000513639 Q3C1V9 767 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 LBX2Q6XYB7 198 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 MB21D1Q8N884 522 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 KBTBD3Q8NAB2 608 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 ANKLE1Q8NAG6 615 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 ACER1Q8TDN7 264 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 LPAR1Q92633 364 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 DEFB118Q96PH6 123 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 STRBPQ96SI9 672 aaKnown RBP8.76□□□□□ -1.01
HTT-212ENST00000513639 PAGR1Q9BTK6 254 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 KANSL2Q9H9L4 492 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 TXNRD2Q9NNW7 524 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 PAK6Q9NQU5 681 aaPredicted RBP8.76□□□□□ -1.01
HTT-212ENST00000513639 IVNS1ABPQ9Y6Y0 642 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 TTC41PQ6P2S7 1318 aa8.76□□□□□ -1.01
HTT-212ENST00000513639 SLC15A5A6NIM6 579 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
HTT-212ENST00000513639 PRKAB2O43741 272 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 SLC34A2O95436 690 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 VCAM1P19320 739 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 GUCY1A2P33402 732 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 CDK8P49336 464 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 SBK1Q52WX2 424 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 CTR9Q6PD62 1173 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 NECAB2Q7Z6G3 386 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 UBE2Q1Q7Z7E8 422 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 PLCD3Q8N3E9 789 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 NACAP1Q9BZK3 213 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 CRISPLD2Q9H0B8 497 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 PUS7LQ9H0K6 701 aaKnown RBP8.75□□□□□ -1.01
HTT-212ENST00000513639 RPAP3Q9H6T3 665 aaPredicted RBP8.75□□□□□ -1.01
HTT-212ENST00000513639 MKNK2Q9HBH9 465 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 SLC5A4Q9NY91 659 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 TMX2Q9Y320 296 aa8.75□□□□□ -1.01
HTT-212ENST00000513639 A0A1W2PRG0 241 aa8.74□□□□□ -1.01
HTT-212ENST00000513639 FARP2O94887 1054 aaPredicted RBP8.74□□□□□ -1.01
HTT-212ENST00000513639 APPP05067 770 aa8.74□□□□□ -1.01
HTT-212ENST00000513639 CYP2D6P10635 497 aa8.74□□□□□ -1.01
HTT-212ENST00000513639 ZKSCAN1P17029 563 aaPredicted RBP8.74□□□□□ -1.01
HTT-212ENST00000513639 ICA1Q05084 483 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms