RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 SLITRK4Q8IW52 837 aa9.99□□□□□ -0.81
TRAPPC11-210ENST00000513600 ABI1Q8IZP0 508 aa9.99□□□□□ -0.81
TRAPPC11-210ENST00000513600 REXO1Q8N1G1 1221 aaKnown RBP9.99□□□□□ -0.81
TRAPPC11-210ENST00000513600 PPP1R13LQ8WUF5 828 aa9.99□□□□□ -0.81
TRAPPC11-210ENST00000513600 EAF1Q96JC9 268 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC11-210ENST00000513600 EHMT1Q9H9B1 1298 aa9.99□□□□□ -0.81
TRAPPC11-210ENST00000513600 DDX41Q9UJV9 622 aaKnown RBP9.99□□□□□ -0.81
TRAPPC11-210ENST00000513600 PRR33A8MZF0 331 aa9.98□□□□□ -0.81
TRAPPC11-210ENST00000513600 CBX7O95931 251 aa9.98□□□□□ -0.81
TRAPPC11-210ENST00000513600 ZNF165P49910 485 aa9.98□□□□□ -0.81
TRAPPC11-210ENST00000513600 IRAK1P51617 712 aa9.98□□□□□ -0.81
TRAPPC11-210ENST00000513600 ZNF574Q6ZN55 896 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC11-210ENST00000513600 WFDC3Q8IUB2 231 aa9.98□□□□□ -0.81
TRAPPC11-210ENST00000513600 CCDC74BQ96LY2 380 aa9.98□□□□□ -0.81
TRAPPC11-210ENST00000513600 CAPN6Q9Y6Q1 641 aa9.98□□□□□ -0.81
TRAPPC11-210ENST00000513600 CD8BP10966 210 aa9.97□□□□□ -0.81
TRAPPC11-210ENST00000513600 MCM4P33991 863 aa9.97□□□□□ -0.81
TRAPPC11-210ENST00000513600 ZNF654Q8IZM8 581 aa9.97□□□□□ -0.81
TRAPPC11-210ENST00000513600 GMIPQ9P107 970 aa9.97□□□□□ -0.81
TRAPPC11-210ENST00000513600 PCDHGB7Q9Y5F8 929 aa9.97□□□□□ -0.81
TRAPPC11-210ENST00000513600 SLC22A31A6NKX4 558 aa9.96□□□□□ -0.82
TRAPPC11-210ENST00000513600 DNAJA2O60884 412 aa9.96□□□□□ -0.82
TRAPPC11-210ENST00000513600 RACK1P63244 317 aaKnown RBP9.96□□□□□ -0.82
TRAPPC11-210ENST00000513600 METTL16Q86W50 562 aaKnown RBP9.96□□□□□ -0.82
TRAPPC11-210ENST00000513600 PHACTR4Q8IZ21 702 aa9.96□□□□□ -0.82
TRAPPC11-210ENST00000513600 ADGRE2Q9UHX3 823 aa9.96□□□□□ -0.82
TRAPPC11-210ENST00000513600 TNNI2P48788 182 aa9.95□□□□□ -0.82
TRAPPC11-210ENST00000513600 CLCQ05315 142 aa9.95□□□□□ -0.82
TRAPPC11-210ENST00000513600 PLCL1Q15111 1095 aa9.95□□□□□ -0.82
TRAPPC11-210ENST00000513600 ANGEL2Q5VTE6 544 aaKnown RBP9.95□□□□□ -0.82
TRAPPC11-210ENST00000513600 CDKAL1Q5VV42 579 aa9.95□□□□□ -0.82
TRAPPC11-210ENST00000513600 GK5Q6ZS86 529 aa9.95□□□□□ -0.82
TRAPPC11-210ENST00000513600 HSPA12BQ96MM6 686 aa9.95□□□□□ -0.82
TRAPPC11-210ENST00000513600 PITPNM2Q9BZ72 1349 aa9.95□□□□□ -0.82
TRAPPC11-210ENST00000513600 FUT4P22083 530 aa9.94□□□□□ -0.82
TRAPPC11-210ENST00000513600 LRRFIP1Q32MZ4 808 aaKnown RBP9.94□□□□□ -0.82
TRAPPC11-210ENST00000513600 THAP5Q7Z6K1 395 aa9.94□□□□□ -0.82
TRAPPC11-210ENST00000513600 BAHD1Q8TBE0 780 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC11-210ENST00000513600 PIWIL2Q8TC59 973 aaKnown RBP9.94□□□□□ -0.82
TRAPPC11-210ENST00000513600 ST14Q9Y5Y6 855 aa9.94□□□□□ -0.82
TRAPPC11-210ENST00000513600 RGS13O14921 159 aa9.93□□□□□ -0.82
TRAPPC11-210ENST00000513600 CD96P40200 585 aa9.93□□□□□ -0.82
TRAPPC11-210ENST00000513600 HDLBPQ00341 1268 aaKnown RBP9.93□□□□□ -0.82
TRAPPC11-210ENST00000513600 IKZF1Q13422 519 aa9.93□□□□□ -0.82
TRAPPC11-210ENST00000513600 ARSHQ5FYA8 562 aa9.93□□□□□ -0.82
TRAPPC11-210ENST00000513600 RNF141Q8WVD5 230 aa9.93□□□□□ -0.82
TRAPPC11-210ENST00000513600 KIF2CQ99661 725 aa9.93□□□□□ -0.82
TRAPPC11-210ENST00000513600 SEMA3GQ9NS98 782 aa9.93□□□□□ -0.82
TRAPPC11-210ENST00000513600 COL17A1Q9UMD9 1497 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC11-210ENST00000513600 RAG1P15918 1043 aa9.92□□□□□ -0.82
TRAPPC11-210ENST00000513600 GBP1P32455 592 aa9.92□□□□□ -0.82
TRAPPC11-210ENST00000513600 CHMP4BP1P59074 171 aa9.92□□□□□ -0.82
TRAPPC11-210ENST00000513600 TNK2Q07912 1038 aa9.92□□□□□ -0.82
TRAPPC11-210ENST00000513600 CDCP2Q5VXM1 449 aa9.92□□□□□ -0.82
TRAPPC11-210ENST00000513600 CBLL1Q75N03 491 aa9.92□□□□□ -0.82
TRAPPC11-210ENST00000513600 NT5DC4Q86YG4 428 aa9.92□□□□□ -0.82
TRAPPC11-210ENST00000513600 KCNH3Q9ULD8 1083 aa9.92□□□□□ -0.82
TRAPPC11-210ENST00000513600 H3BS24 57 aa9.91□□□□□ -0.82
TRAPPC11-210ENST00000513600 OVOS1Q6IE37 1185 aa9.91□□□□□ -0.82
TRAPPC11-210ENST00000513600 PI4K2BQ8TCG2 481 aa9.91□□□□□ -0.82
TRAPPC11-210ENST00000513600 KREMEN1Q96MU8 473 aa9.91□□□□□ -0.82
TRAPPC11-210ENST00000513600 ASPNQ9BXN1 380 aa9.91□□□□□ -0.82
TRAPPC11-210ENST00000513600 LMCD1Q9NZU5 365 aa9.91□□□□□ -0.82
TRAPPC11-210ENST00000513600 IMPDH2P12268 514 aa9.9□□□□□ -0.82
TRAPPC11-210ENST00000513600 ZNF792Q3KQV3 632 aa9.9□□□□□ -0.82
TRAPPC11-210ENST00000513600 MCTP1Q6DN14 999 aa9.9□□□□□ -0.82
TRAPPC11-210ENST00000513600 TMEM40Q8WWA1 233 aa9.9□□□□□ -0.82
TRAPPC11-210ENST00000513600 ATG4CQ96DT6 458 aa9.9□□□□□ -0.82
TRAPPC11-210ENST00000513600 Q96M66 194 aa9.9□□□□□ -0.82
TRAPPC11-210ENST00000513600 CNNM2Q9H8M5 875 aa9.9□□□□□ -0.82
TRAPPC11-210ENST00000513600 MEIS3P2A8K0S8 358 aa9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 ZP2Q05996 745 aa9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 C9orf131Q5VYM1 1079 aa9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 SLC23A3Q6PIS1 610 aa9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 NLRC3Q7RTR2 1065 aa9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 UBE2FQ969M7 185 aa9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 SPATA32Q96LK8 384 aa9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 TRIT1Q9H3H1 467 aaKnown RBP9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 ATP13A1Q9HD20 1204 aa9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 PODXL2Q9NZ53 605 aa9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC11-210ENST00000513600 TAL1P17542 331 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC11-210ENST00000513600 CCNFP41002 786 aa9.88□□□□□ -0.83
TRAPPC11-210ENST00000513600 PAK2Q13177 524 aa9.88□□□□□ -0.83
TRAPPC11-210ENST00000513600 COL9A2Q14055 689 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC11-210ENST00000513600 DTWD2Q8NBA8 298 aa9.88□□□□□ -0.83
TRAPPC11-210ENST00000513600 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRAPPC11-210ENST00000513600 ZSWIM5Q9P217 1185 aa9.88□□□□□ -0.83
TRAPPC11-210ENST00000513600 ZNRF3Q9ULT6 936 aa9.88□□□□□ -0.83
TRAPPC11-210ENST00000513600 RNF4P78317 190 aa9.87□□□□□ -0.83
TRAPPC11-210ENST00000513600 RAD51AP2Q09MP3 1159 aa9.87□□□□□ -0.83
TRAPPC11-210ENST00000513600 FERD3LQ96RJ6 166 aa9.87□□□□□ -0.83
TRAPPC11-210ENST00000513600 GPR62Q9BZJ7 368 aa9.87□□□□□ -0.83
TRAPPC11-210ENST00000513600 MBNL3Q9NUK0 354 aaKnown RBP9.87□□□□□ -0.83
TRAPPC11-210ENST00000513600 UBOX5O94941 541 aa9.86□□□□□ -0.83
TRAPPC11-210ENST00000513600 NME1P15531 152 aaKnown RBP9.86□□□□□ -0.83
TRAPPC11-210ENST00000513600 TMPRSS7Q7RTY8 843 aa9.86□□□□□ -0.83
TRAPPC11-210ENST00000513600 VWCEQ96DN2 955 aa9.86□□□□□ -0.83
TRAPPC11-210ENST00000513600 TGIF2Q9GZN2 237 aa9.86□□□□□ -0.83
TRAPPC11-210ENST00000513600 DUSP15Q9H1R2 295 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms