RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LRRC9Q6ZRR7 1453 aa5.92□□□□□ -1.46
PDLIM5-218ENST00000513341 MED14OSP0DP75 135 aa5.92□□□□□ -1.46
PDLIM5-218ENST00000513341 ZP2Q05996 745 aa5.92□□□□□ -1.46
PDLIM5-218ENST00000513341 RPS26P11Q5JNZ5 115 aaPredicted RBP5.92□□□□□ -1.46
PDLIM5-218ENST00000513341 FYB2Q5VWT5 728 aa5.92□□□□□ -1.46
PDLIM5-218ENST00000513341 FAM214BQ7L5A3 538 aa5.92□□□□□ -1.46
PDLIM5-218ENST00000513341 GJD3Q8N144 294 aa5.92□□□□□ -1.46
PDLIM5-218ENST00000513341 CD320Q9NPF0 282 aa5.92□□□□□ -1.46
PDLIM5-218ENST00000513341 SETD1AO15047 1707 aaKnown RBP5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 INHBBP09529 407 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 LTKP29376 864 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 CTSWP56202 376 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 IKZF1Q13422 519 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 KIRREL1Q96J84 757 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 PRDM7Q9NQW5 492 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 ROBO1Q9Y6N7 1651 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 TMEM94Q12767 1356 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 CCNB3Q8WWL7 1395 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 FGD6Q6ZV73 1430 aa5.91□□□□□ -1.46
PDLIM5-218ENST00000513341 SCAF11Q99590 1463 aaKnown RBP5.9□□□□□ -1.46
PDLIM5-218ENST00000513341 CLCN7P51798 805 aa5.9□□□□□ -1.46
PDLIM5-218ENST00000513341 TMEM67Q5HYA8 995 aa5.9□□□□□ -1.46
PDLIM5-218ENST00000513341 MPZL3Q6UWV2 235 aa5.9□□□□□ -1.46
PDLIM5-218ENST00000513341 CYFIP1Q7L576 1253 aa5.9□□□□□ -1.46
PDLIM5-218ENST00000513341 SPACA3Q8IXA5 215 aa5.9□□□□□ -1.46
PDLIM5-218ENST00000513341 HEXIM2Q96MH2 286 aaKnown RBP5.9□□□□□ -1.46
PDLIM5-218ENST00000513341 CCDC86Q9H6F5 360 aaKnown RBP5.9□□□□□ -1.46
PDLIM5-218ENST00000513341 GTF2IRD1Q9UHL9 959 aa5.9□□□□□ -1.46
PDLIM5-218ENST00000513341 ARHGAP23Q9P227 1491 aa5.9□□□□□ -1.47
PDLIM5-218ENST00000513341 MBD5Q9P267 1494 aa5.9□□□□□ -1.47
PDLIM5-218ENST00000513341 SLIT1O75093 1534 aa5.89□□□□□ -1.47
PDLIM5-218ENST00000513341 ZNF862O60290 1169 aa5.89□□□□□ -1.47
PDLIM5-218ENST00000513341 LIG1P18858 919 aa5.89□□□□□ -1.47
PDLIM5-218ENST00000513341 TTLL4Q14679 1199 aa5.89□□□□□ -1.47
PDLIM5-218ENST00000513341 KCNA10Q16322 511 aa5.89□□□□□ -1.47
PDLIM5-218ENST00000513341 MEX3CQ5U5Q3 659 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-218ENST00000513341 WDR89Q96FK6 387 aaPredicted RBP5.89□□□□□ -1.47
PDLIM5-218ENST00000513341 MSH6P52701 1360 aa5.89□□□□□ -1.47
PDLIM5-218ENST00000513341 ABCC3O15438 1527 aa5.89□□□□□ -1.47
PDLIM5-218ENST00000513341 NPIPB6E9PJ23 425 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 FAM13AO94988 1023 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 TMEM253P0C7T8 217 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 TSPY4P0CV99 314 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 TSPY10P0CW01 314 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 GLDCP23378 1020 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 GDNFP39905 211 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 RBM6P78332 1123 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 ERICH6Q7L0X2 663 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 PITPNM2Q9BZ72 1349 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 NCOA3Q9Y6Q9 1424 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 PHLPP1O60346 1717 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 UBR1Q8IWV7 1749 aa5.88□□□□□ -1.47
PDLIM5-218ENST00000513341 FZD6O60353 706 aa5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 SRFP11831 508 aa5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 ITIH2P19823 946 aa5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 NKPD1Q17RQ9 610 aa5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 CIAPIN1Q6FI81 312 aa5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 TOP6BLQ8N6T0 577 aa5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 GTF3C2Q8WUA4 911 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 CCDC120Q96HB5 630 aa5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 C20orf173Q96LM9 149 aa5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 PRDM15P57071 1507 aaPredicted RBP5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 SRCAPQ6ZRS2 3230 aa5.87□□□□□ -1.47
PDLIM5-218ENST00000513341 NCOA2Q15596 1464 aa5.86□□□□□ -1.47
PDLIM5-218ENST00000513341 FYCO1Q9BQS8 1478 aa5.86□□□□□ -1.47
PDLIM5-218ENST00000513341 TMEM2Q9UHN6 1383 aa5.86□□□□□ -1.47
PDLIM5-218ENST00000513341 ZNF644Q9H582 1327 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-218ENST00000513341 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-218ENST00000513341 POLR3DP05423 398 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-218ENST00000513341 HOXA5P20719 270 aa5.86□□□□□ -1.47
PDLIM5-218ENST00000513341 DBX2Q6ZNG2 339 aa5.86□□□□□ -1.47
PDLIM5-218ENST00000513341 C19orf73Q9NVV2 129 aa5.86□□□□□ -1.47
PDLIM5-218ENST00000513341 TET3O43151 1660 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 KDM5AP29375 1690 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 MAP3K1Q13233 1512 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 NKTRP30414 1462 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 ERVK-7P63135 1459 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 ARHGAP31Q2M1Z3 1444 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 RNGTTO60942 597 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 NEFMP07197 916 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 GSTP1P09211 210 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 ERVK-24P63145 666 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 PRPF40BQ6NWY9 871 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 RNF214Q8ND24 703 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 RELTQ969Z4 430 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 ISL2Q96A47 359 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 NSUN3Q9H649 340 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 C19orf44Q9H6X5 657 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 GTF3C3Q9Y5Q9 886 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 CFAP65Q6ZU64 1925 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 SHPRHQ149N8 1683 aa5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 COL16A1Q07092 1604 aaPredicted RBP5.85□□□□□ -1.47
PDLIM5-218ENST00000513341 CAMSAP2Q08AD1 1489 aa5.84□□□□□ -1.47
PDLIM5-218ENST00000513341 NEFLP07196 543 aa5.84□□□□□ -1.47
PDLIM5-218ENST00000513341 HCLS1P14317 486 aaPredicted RBP5.84□□□□□ -1.47
PDLIM5-218ENST00000513341 SF3B2Q13435 895 aaKnown RBP5.84□□□□□ -1.47
PDLIM5-218ENST00000513341 ATG14Q6ZNE5 492 aa5.84□□□□□ -1.47
PDLIM5-218ENST00000513341 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.84□□□□□ -1.47
PDLIM5-218ENST00000513341 LRRC59Q96AG4 307 aaKnown RBP5.84□□□□□ -1.47
PDLIM5-218ENST00000513341 SLC26A8Q96RN1 970 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms