RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 MIGA1Q8NAN2 632 aa13.31□□□□□ -0.28
SKP2-207ENST00000513263 KIF1BPQ96EK5 621 aa13.31□□□□□ -0.28
SKP2-207ENST00000513263 PAWRQ96IZ0 340 aaKnown RBP13.31□□□□□ -0.28
SKP2-207ENST00000513263 KIAA1683Q9H0B3 1180 aa13.31□□□□□ -0.28
SKP2-207ENST00000513263 CCDC8Q9H0W5 538 aaPredicted RBP13.31□□□□□ -0.28
SKP2-207ENST00000513263 SAP30BPQ9UHR5 308 aaKnown RBP13.31□□□□□ -0.28
SKP2-207ENST00000513263 DDX19BQ9UMR2 479 aa13.31□□□□□ -0.28
SKP2-207ENST00000513263 IVNS1ABPQ9Y6Y0 642 aa13.31□□□□□ -0.28
SKP2-207ENST00000513263 COL6A3P12111 3177 aa13.31□□□□□ -0.28
SKP2-207ENST00000513263 MAGEB6P1A0A0J9YX57 407 aa13.3□□□□□ -0.28
SKP2-207ENST00000513263 RAB3GAP1Q15042 981 aa13.3□□□□□ -0.28
SKP2-207ENST00000513263 GPR142Q7Z601 462 aa13.3□□□□□ -0.28
SKP2-207ENST00000513263 PLEKHH3Q7Z736 793 aa13.3□□□□□ -0.28
SKP2-207ENST00000513263 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
SKP2-207ENST00000513263 TRIB2Q92519 343 aa13.3□□□□□ -0.28
SKP2-207ENST00000513263 P2RX7Q99572 595 aaKnown RBP13.3□□□□□ -0.28
SKP2-207ENST00000513263 PRO3102Q9H379 93 aa13.3□□□□□ -0.28
SKP2-207ENST00000513263 SH2D4AQ9H788 454 aa13.3□□□□□ -0.28
SKP2-207ENST00000513263 TLR7Q9NYK1 1049 aaKnown RBP13.3□□□□□ -0.28
SKP2-207ENST00000513263 OGDHLQ9ULD0 1010 aa13.3□□□□□ -0.28
SKP2-207ENST00000513263 EXOC6BQ9Y2D4 811 aa13.3□□□□□ -0.28
SKP2-207ENST00000513263 ZNFX1Q9P2E3 1918 aaKnown RBP13.3□□□□□ -0.28
SKP2-207ENST00000513263 RLFQ13129 1914 aa13.29□□□□□ -0.28
SKP2-207ENST00000513263 POLR3DP05423 398 aaPredicted RBP13.29□□□□□ -0.28
SKP2-207ENST00000513263 IFIT2P09913 472 aaKnown RBP13.29□□□□□ -0.28
SKP2-207ENST00000513263 RLBP1P12271 317 aa13.29□□□□□ -0.28
SKP2-207ENST00000513263 CYP2B6P20813 491 aa13.29□□□□□ -0.28
SKP2-207ENST00000513263 DYNLL1P63167 89 aaKnown RBP13.29□□□□□ -0.28
SKP2-207ENST00000513263 GPR153Q6NV75 609 aa13.29□□□□□ -0.28
SKP2-207ENST00000513263 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
SKP2-207ENST00000513263 PAGR1Q9BTK6 254 aa13.29□□□□□ -0.28
SKP2-207ENST00000513263 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.29□□□□□ -0.28
SKP2-207ENST00000513263 C11orf49Q9H6J7 331 aa13.29□□□□□ -0.28
SKP2-207ENST00000513263 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
SKP2-207ENST00000513263 COL11A1P12107 1806 aaPredicted RBP13.29□□□□□ -0.28
SKP2-207ENST00000513263 PLXNA1Q9UIW2 1896 aa13.29□□□□□ -0.28
SKP2-207ENST00000513263 LAMA2P24043 3122 aaKnown RBP13.28□□□□□ -0.28
SKP2-207ENST00000513263 RAB11FIP3O75154 756 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 VCAM1P19320 739 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 BMP8BP34820 402 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 SLC9C2Q5TAH2 1124 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 MFSD14CQ5VZR4 134 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 MB21D1Q8N884 522 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 RHPN1Q8TCX5 695 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 RIOK1Q9BRS2 568 aaKnown RBP13.28□□□□□ -0.28
SKP2-207ENST00000513263 TXNRD2Q9NNW7 524 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 RBPJLQ9UBG7 517 aa13.28□□□□□ -0.28
SKP2-207ENST00000513263 CUL9Q8IWT3 2517 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 SLC15A5A6NIM6 579 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 PDE6AP16499 860 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 MAP2K5Q13163 448 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 MORN1Q5T089 497 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 CATSPERGQ6ZRH7 1159 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 TMEM179Q6ZVK1 233 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 LPAR1Q92633 364 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 USP6NLQ92738 828 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 SLC5A4Q9NY91 659 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 MYH4Q9Y623 1939 aa13.27□□□□□ -0.29
SKP2-207ENST00000513263 HOXC6P09630 235 aa13.26□□□□□ -0.29
SKP2-207ENST00000513263 SHMT1P34896 483 aa13.26□□□□□ -0.29
SKP2-207ENST00000513263 ARHGEF10LQ9HCE6 1279 aa13.26□□□□□ -0.29
SKP2-207ENST00000513263 ATP8A2Q9NTI2 1148 aa13.26□□□□□ -0.29
SKP2-207ENST00000513263 MCM9Q9NXL9 1143 aa13.26□□□□□ -0.29
SKP2-207ENST00000513263 HOXC10Q9NYD6 342 aa13.26□□□□□ -0.29
SKP2-207ENST00000513263 GREB1LQ9C091 1923 aaPredicted RBP13.25□□□□□ -0.29
SKP2-207ENST00000513263 STRNO43815 780 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 JAG1P78504 1218 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 GABPAQ06546 454 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 GRB14Q14449 540 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 ZYXQ15942 572 aaKnown RBP13.25□□□□□ -0.29
SKP2-207ENST00000513263 WDR78Q5VTH9 848 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 ZSCAN25Q6NSZ9 544 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 C7orf61Q8IZ16 206 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 SHCBP1Q8NEM2 672 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 DIS3LQ8TF46 1054 aaKnown RBP13.25□□□□□ -0.29
SKP2-207ENST00000513263 EDC3Q96F86 508 aaKnown RBP13.25□□□□□ -0.29
SKP2-207ENST00000513263 DNAJC2Q99543 621 aaKnown RBP13.25□□□□□ -0.29
SKP2-207ENST00000513263 PORCNQ9H237 461 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 RPAP3Q9H6T3 665 aaPredicted RBP13.25□□□□□ -0.29
SKP2-207ENST00000513263 ANTXR1Q9H6X2 564 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 A0A0C4DFX4 3053 aa13.25□□□□□ -0.29
SKP2-207ENST00000513263 ZNF532Q9HCE3 1301 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
SKP2-207ENST00000513263 GOLIM4O00461 696 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 MPHOSPH10O00566 681 aaKnown RBP13.24□□□□□ -0.29
SKP2-207ENST00000513263 PTPREP23469 700 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 CACNB2Q08289 660 aaPredicted RBP13.24□□□□□ -0.29
SKP2-207ENST00000513263 COG2Q14746 738 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 DIEXFQ68CQ4 756 aaKnown RBP13.24□□□□□ -0.29
SKP2-207ENST00000513263 PANK1Q8TE04 598 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 CCDC17Q96LX7 622 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 GDF15Q99988 308 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 TANGO6Q9C0B7 1094 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 IL1RAPL2Q9NP60 686 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 DCP1AQ9NPI6 582 aaPredicted RBP13.24□□□□□ -0.29
SKP2-207ENST00000513263 PAG1Q9NWQ8 432 aa13.24□□□□□ -0.29
SKP2-207ENST00000513263 LTBP2Q14767 1821 aa13.23□□□□□ -0.29
SKP2-207ENST00000513263 COL6A1P12109 1028 aa13.23□□□□□ -0.29
SKP2-207ENST00000513263 COPB2P35606 906 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms