RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 ZNF341Q9BYN7 854 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 PA2G4Q9UQ80 394 aaKnown RBP7.32□□□□□ -1.24
GYPB-213ENST00000513128 SUGT1Q9Y2Z0 365 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 MAST3O60307 1309 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 FAM196BA6NMK8 535 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 PDHXO00330 501 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 CYP2C8P10632 490 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 TCF3P15923 654 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 MARSP56192 900 aaKnown RBP7.31□□□□□ -1.24
GYPB-213ENST00000513128 DOCK1Q14185 1865 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 ATP2B3Q16720 1220 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 SLC4A8Q2Y0W8 1093 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 DCAF15Q66K64 600 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 GPAT2Q6NUI2 795 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 PACS2Q86VP3 889 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 PLEKHM2Q8IWE5 1019 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 TRMT2AQ8IZ69 625 aaKnown RBP7.31□□□□□ -1.24
GYPB-213ENST00000513128 SHISA4Q96DD7 197 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 ZCCHC17Q9NP64 241 aaKnown RBP7.31□□□□□ -1.24
GYPB-213ENST00000513128 SMC4Q9NTJ3 1288 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 USP40Q9NVE5 1235 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.31□□□□□ -1.24
GYPB-213ENST00000513128 LHX6Q9UPM6 363 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 KCNH4Q9UQ05 1017 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 LRRFIP2Q9Y608 721 aaKnown RBP7.31□□□□□ -1.24
GYPB-213ENST00000513128 RFX7Q2KHR2 1363 aa7.31□□□□□ -1.24
GYPB-213ENST00000513128 ATAD5Q96QE3 1844 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 ANKRD33BA6NCL7 494 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 H0YGN5 161 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 CIAO1O76071 339 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 LDHBP07195 334 aaKnown RBP7.3□□□□□ -1.24
GYPB-213ENST00000513128 UBTFL1P0CB47 393 aaPredicted RBP7.3□□□□□ -1.24
GYPB-213ENST00000513128 PSMC4P43686 418 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 RGS3P49796 1198 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 FXR1P51114 621 aaKnown RBP eCLIP7.3□□□□□ -1.24
GYPB-213ENST00000513128 TIMM10P62072 90 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 TAGLNQ01995 201 aaKnown RBP7.3□□□□□ -1.24
GYPB-213ENST00000513128 FUT2Q10981 343 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 PTK7Q13308 1070 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 ALDH1L2Q3SY69 923 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 NOL9Q5SY16 702 aaKnown RBP7.3□□□□□ -1.24
GYPB-213ENST00000513128 SWT1Q5T5J6 900 aaKnown RBP7.3□□□□□ -1.24
GYPB-213ENST00000513128 CCDC102BQ68D86 513 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 ANKRD23Q86SG2 305 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 NBPF11Q86T75 865 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 CCDC84Q86UT8 332 aaPredicted RBP7.3□□□□□ -1.24
GYPB-213ENST00000513128 ZNF384Q8TF68 577 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 SLC39A7Q92504 469 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 CLP1Q92989 425 aaKnown RBP7.3□□□□□ -1.24
GYPB-213ENST00000513128 GCC1Q96CN9 775 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 HOOK2Q96ED9 719 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 MEIS3Q99687 375 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 CEP126Q9P2H0 1117 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 SRRDQ9UH36 339 aa7.3□□□□□ -1.24
GYPB-213ENST00000513128 NOB1Q9ULX3 412 aaKnown RBP7.3□□□□□ -1.24
GYPB-213ENST00000513128 GAKO14976 1311 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 SALL1Q9NSC2 1324 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 DDTLA6NHG4 134 aaPredicted RBP7.29□□□□□ -1.24
GYPB-213ENST00000513128 WDHD1O75717 1129 aaPredicted RBP7.29□□□□□ -1.24
GYPB-213ENST00000513128 BCRP11274 1271 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 ZEB1P37275 1124 aaPredicted RBP7.29□□□□□ -1.24
GYPB-213ENST00000513128 PRKCZQ05513 592 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 KIF22Q14807 665 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 ARHGEF6Q15052 776 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 PNMA1Q8ND90 353 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 COPRSQ9NQ92 184 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 DDX4Q9NQI0 724 aaKnown RBP7.29□□□□□ -1.24
GYPB-213ENST00000513128 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.29□□□□□ -1.24
GYPB-213ENST00000513128 GABRQQ9UN88 632 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 TNNQ9UQP3 1299 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 ZHX2Q9Y6X8 837 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 MYO5AQ9Y4I1 1855 aaKnown RBP7.29□□□□□ -1.24
GYPB-213ENST00000513128 SIPA1L1O43166 1804 aa7.29□□□□□ -1.24
GYPB-213ENST00000513128 DOCK3Q8IZD9 2030 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 MYPNQ86TC9 1320 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 CDK5RAP2Q96SN8 1893 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 FMNL1O95466 1100 aaPredicted RBP7.28□□□□□ -1.24
GYPB-213ENST00000513128 GNRH1P01148 92 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 CCL5P13501 91 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 HOXB3P14651 431 aaPredicted RBP7.28□□□□□ -1.24
GYPB-213ENST00000513128 PTPRAP18433 802 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 PTPREP23469 700 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 GRK4P32298 578 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 IL15P40933 162 aaPredicted RBP7.28□□□□□ -1.24
GYPB-213ENST00000513128 MAP3K10Q02779 954 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 GPR153Q6NV75 609 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 PI16Q6UXB8 463 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 UBE2Q1Q7Z7E8 422 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 SCYL3Q8IZE3 742 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 IDI2Q9BXS1 227 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 GNL3LQ9NVN8 582 aaKnown RBP7.28□□□□□ -1.24
GYPB-213ENST00000513128 BIN2Q9UBW5 565 aaPredicted RBP7.28□□□□□ -1.24
GYPB-213ENST00000513128 ABCF2Q9UG63 623 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 DENND2AQ9ULE3 1009 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 AFG3L2Q9Y4W6 797 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 ALPK3Q96L96 1907 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 LOC285556D6RIA3 1793 aa7.28□□□□□ -1.24
GYPB-213ENST00000513128 A0A0G2JLL6 359 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms