RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 TDRD3Q9H7E2 651 aaKnown RBP11.76□□□□□ -0.53
TRIO-220ENST00000512979 NOB1Q9ULX3 412 aaKnown RBP11.76□□□□□ -0.53
TRIO-220ENST00000512979 UBTFL1P0CB47 393 aaPredicted RBP11.75□□□□□ -0.53
TRIO-220ENST00000512979 SERPINB4P48594 390 aa11.75□□□□□ -0.53
TRIO-220ENST00000512979 OXLD1Q5BKU9 147 aa11.75□□□□□ -0.53
TRIO-220ENST00000512979 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
TRIO-220ENST00000512979 ZNF296Q8WUU4 475 aaPredicted RBP11.75□□□□□ -0.53
TRIO-220ENST00000512979 WNK4Q96J92 1243 aa11.75□□□□□ -0.53
TRIO-220ENST00000512979 API5Q9BZZ5 524 aaKnown RBP11.75□□□□□ -0.53
TRIO-220ENST00000512979 MANSC4A6NHS7 340 aaPredicted RBP11.74□□□□□ -0.53
TRIO-220ENST00000512979 UNCXA6NJT0 531 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 TCP10L2B9ZVM9 353 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 GPR25O00155 361 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 USP2O75604 605 aaPredicted RBP11.74□□□□□ -0.53
TRIO-220ENST00000512979 ZBTB48P10074 688 aaPredicted RBP11.74□□□□□ -0.53
TRIO-220ENST00000512979 SLC5A1P13866 664 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 FGFR2P21802 821 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 SCNN1AP37088 669 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 RGS19P49795 217 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 MLLT1Q03111 559 aaPredicted RBP11.74□□□□□ -0.53
TRIO-220ENST00000512979 SH3RF1Q7Z6J0 888 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 KIAA1024Q9UPX6 916 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 KIF16BQ96L93 1317 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 ECM29Q5VYK3 1845 aa11.74□□□□□ -0.53
TRIO-220ENST00000512979 SOWAHDA6NJG2 315 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 ZBTB7BO15156 539 aaPredicted RBP11.73□□□□□ -0.53
TRIO-220ENST00000512979 ALDH1A1P00352 501 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 TNNI2P48788 182 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 HDLBPQ00341 1268 aaKnown RBP11.73□□□□□ -0.53
TRIO-220ENST00000512979 NOM1Q5C9Z4 860 aaKnown RBP11.73□□□□□ -0.53
TRIO-220ENST00000512979 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 ANKRD13AQ8IZ07 590 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 LPIN2Q92539 896 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 TEKT1Q969V4 418 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 TEPSINQ96N21 525 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 MTRQ99707 1265 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 TMEM39BQ9GZU3 492 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 SIL1Q9H173 461 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 R3HDMLQ9H3Y0 253 aa11.73□□□□□ -0.53
TRIO-220ENST00000512979 LRRFIP2Q9Y608 721 aaKnown RBP11.73□□□□□ -0.53
TRIO-220ENST00000512979 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 MAST3O60307 1309 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 FKTNO75072 461 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 DKK1O94907 266 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 RARSP54136 660 aaKnown RBP11.72□□□□□ -0.53
TRIO-220ENST00000512979 CACNB3P54284 484 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 INHBEP58166 350 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 AGERQ15109 404 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 SIX5Q8N196 739 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 BAP1Q92560 729 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 CFHR5Q9BXR6 569 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 TMOD2Q9NZR1 351 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 HDAC5Q9UQL6 1122 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 SUGT1Q9Y2Z0 365 aa11.72□□□□□ -0.53
TRIO-220ENST00000512979 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRIO-220ENST00000512979 CIAO1O76071 339 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 SOX10P56693 466 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 PKN2Q16513 984 aaKnown RBP11.71□□□□□ -0.53
TRIO-220ENST00000512979 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 BPHLQ86WA6 291 aaPredicted RBP11.71□□□□□ -0.53
TRIO-220ENST00000512979 WDR66Q8TBY9 1149 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 OPTNQ96CV9 577 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 ZDHHC15Q96MV8 337 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 MEIS3Q99687 375 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 MRIQ9BWK5 157 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 ELP3Q9H9T3 547 aa11.71□□□□□ -0.53
TRIO-220ENST00000512979 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.53
TRIO-220ENST00000512979 IL15P40933 162 aaPredicted RBP11.7□□□□□ -0.54
TRIO-220ENST00000512979 LINC01559Q495D7 138 aa11.7□□□□□ -0.54
TRIO-220ENST00000512979 APOBEC3HQ6NTF7 200 aaKnown RBP11.7□□□□□ -0.54
TRIO-220ENST00000512979 FOXJ1Q92949 421 aa11.7□□□□□ -0.54
TRIO-220ENST00000512979 PRMT3O60678 531 aa11.69□□□□□ -0.54
TRIO-220ENST00000512979 SEC13P55735 322 aa11.69□□□□□ -0.54
TRIO-220ENST00000512979 VGLL4Q14135 290 aa11.69□□□□□ -0.54
TRIO-220ENST00000512979 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
TRIO-220ENST00000512979 OTUD7BQ6GQQ9 843 aa11.69□□□□□ -0.54
TRIO-220ENST00000512979 HHIPL2Q6UWX4 724 aa11.69□□□□□ -0.54
TRIO-220ENST00000512979 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.69□□□□□ -0.54
TRIO-220ENST00000512979 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRIO-220ENST00000512979 ARHGAP45Q92619 1136 aa11.69□□□□□ -0.54
TRIO-220ENST00000512979 KCTD12Q96CX2 325 aaKnown RBP11.69□□□□□ -0.54
TRIO-220ENST00000512979 GNL3LQ9NVN8 582 aaKnown RBP11.69□□□□□ -0.54
TRIO-220ENST00000512979 RBM19Q9Y4C8 960 aaKnown RBP11.69□□□□□ -0.54
TRIO-220ENST00000512979 CSADQ9Y600 493 aa11.69□□□□□ -0.54
TRIO-220ENST00000512979 GNAI3P08754 354 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 PHKA1P46020 1223 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 LCE2DQ5TA82 110 aaPredicted RBP11.68□□□□□ -0.54
TRIO-220ENST00000512979 RNF20Q5VTR2 975 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 INTS3Q68E01 1043 aaKnown RBP11.68□□□□□ -0.54
TRIO-220ENST00000512979 FBXO46Q6PJ61 603 aaPredicted RBP11.68□□□□□ -0.54
TRIO-220ENST00000512979 DNAJC14Q6Y2X3 702 aaPredicted RBP11.68□□□□□ -0.54
TRIO-220ENST00000512979 NYAP1Q6ZVC0 841 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 FAM83AQ86UY5 434 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 TPCN2Q8NHX9 752 aa11.68□□□□□ -0.54
TRIO-220ENST00000512979 C1orf216Q8TAB5 229 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms