RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 BBOX1O75936 387 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 PROCP04070 461 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 GNAI1P63096 354 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 CALD1Q05682 793 aaKnown RBP8.89□□□□□ -0.99
RFC1-215ENST00000512881 SLC51AQ86UW1 340 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 PLBD2Q8NHP8 589 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 TMX4Q9H1E5 349 aaPredicted RBP8.89□□□□□ -0.99
RFC1-215ENST00000512881 VRTNQ9H8Y1 702 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 IFT57Q9NWB7 429 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 HYPKQ9NX55 129 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 ATP6V0A2Q9Y487 856 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 SBF1O95248 1867 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 SH3TC1Q8TE82 1336 aa8.88□□□□□ -0.99
RFC1-215ENST00000512881 ELL2O00472 640 aaPredicted RBP8.88□□□□□ -0.99
RFC1-215ENST00000512881 LDHDQ86WU2 507 aa8.88□□□□□ -0.99
RFC1-215ENST00000512881 GPC2Q8N158 579 aa8.88□□□□□ -0.99
RFC1-215ENST00000512881 JMYQ8N9B5 988 aa8.88□□□□□ -0.99
RFC1-215ENST00000512881 CEP63Q96MT8 703 aa8.88□□□□□ -0.99
RFC1-215ENST00000512881 SPOCK3Q9BQ16 436 aa8.88□□□□□ -0.99
RFC1-215ENST00000512881 ISCA1Q9BUE6 129 aa8.88□□□□□ -0.99
RFC1-215ENST00000512881 HACL1Q9UJ83 578 aa8.88□□□□□ -0.99
RFC1-215ENST00000512881 ABCC4O15439 1325 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 ELOA3CA0A087WX78 387 aaPredicted RBP8.87□□□□□ -0.99
RFC1-215ENST00000512881 ELOA3DA6NLF2 546 aaPredicted RBP8.87□□□□□ -0.99
RFC1-215ENST00000512881 SIN3BO75182 1162 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 IGFBP4P22692 258 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 EPHX2P34913 555 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 ZEB1P37275 1124 aaPredicted RBP8.87□□□□□ -0.99
RFC1-215ENST00000512881 EIF6P56537 245 aaKnown RBP8.87□□□□□ -0.99
RFC1-215ENST00000512881 SPEM2Q0P670 501 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 ELOA3BQ3SY89 546 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 CCDC184Q52MB2 194 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 EAPPQ56P03 285 aaPredicted RBP8.87□□□□□ -0.99
RFC1-215ENST00000512881 DDX46Q7L014 1031 aaKnown RBP8.87□□□□□ -0.99
RFC1-215ENST00000512881 RAB44Q7Z6P3 723 aaPredicted RBP8.87□□□□□ -0.99
RFC1-215ENST00000512881 ALYREFQ86V81 257 aaKnown RBP8.87□□□□□ -0.99
RFC1-215ENST00000512881 SP8Q8IXZ3 490 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 C8orf58Q8NAV2 365 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 ELOA3Q8NG57 546 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 FAM89AQ96GI7 184 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 HINFPQ9BQA5 517 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 ANKIB1Q9P2G1 1089 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 DLG5Q8TDM6 1919 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 SNED1Q8TER0 1413 aa8.87□□□□□ -0.99
RFC1-215ENST00000512881 PPIP5K2O43314 1243 aa8.86□□□□□ -0.99
RFC1-215ENST00000512881 TRIM28Q13263 835 aaKnown RBP8.86□□□□□ -0.99
RFC1-215ENST00000512881 GRAPQ13588 217 aa8.86□□□□□ -0.99
RFC1-215ENST00000512881 DPP8Q6V1X1 898 aaPredicted RBP8.86□□□□□ -0.99
RFC1-215ENST00000512881 PNMA8AQ86V59 439 aaPredicted RBP8.86□□□□□ -0.99
RFC1-215ENST00000512881 NIM1KQ8IY84 436 aa8.86□□□□□ -0.99
RFC1-215ENST00000512881 SUPT20HQ8NEM7 779 aa8.86□□□□□ -0.99
RFC1-215ENST00000512881 GRAPLQ8TC17 118 aaPredicted RBP8.86□□□□□ -0.99
RFC1-215ENST00000512881 TNFRSF25Q93038 417 aa8.86□□□□□ -0.99
RFC1-215ENST00000512881 RTFDC1Q9BY42 306 aaPredicted RBP8.86□□□□□ -0.99
RFC1-215ENST00000512881 VPS33BQ9H267 617 aa8.86□□□□□ -0.99
RFC1-215ENST00000512881 LAMB4A4D0S4 1761 aa8.86□□□□□ -0.99
RFC1-215ENST00000512881 FER1L6Q2WGJ9 1857 aa8.85□□□□□ -0.99
RFC1-215ENST00000512881 TNRC6CQ9HCJ0 1690 aaKnown RBP8.85□□□□□ -0.99
RFC1-215ENST00000512881 ADARB2-AS1A8MUL3 147 aa8.85□□□□□ -0.99
RFC1-215ENST00000512881 MSTNO14793 375 aa8.85□□□□□ -0.99
RFC1-215ENST00000512881 SUZ12Q15022 739 aaKnown RBP8.85□□□□□ -0.99
RFC1-215ENST00000512881 SF3B3Q15393 1217 aaKnown RBP8.85□□□□□ -0.99
RFC1-215ENST00000512881 RTN1Q16799 776 aa8.85□□□□□ -0.99
RFC1-215ENST00000512881 AOC3Q16853 763 aa8.85□□□□□ -0.99
RFC1-215ENST00000512881 BTLAQ7Z6A9 289 aa8.85□□□□□ -0.99
RFC1-215ENST00000512881 TRIM11Q96F44 468 aa8.85□□□□□ -0.99
RFC1-215ENST00000512881 CHMP4AQ9BY43 222 aa8.85□□□□□ -0.99
RFC1-215ENST00000512881 PHAXQ9H814 394 aaKnown RBP8.85□□□□□ -0.99
RFC1-215ENST00000512881 WDR90Q96KV7 1748 aa8.85□□□□□ -0.99
RFC1-215ENST00000512881 PASKQ96RG2 1323 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 PIK3R2O00459 728 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 IRS4O14654 1257 aaPredicted RBP8.84□□□□□ -0.99
RFC1-215ENST00000512881 EPS15P42566 896 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 HIF1AQ16665 826 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 CCDC30Q5VVM6 783 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 IER5Q5VY09 327 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 MAP1SQ66K74 1059 aaPredicted RBP8.84□□□□□ -0.99
RFC1-215ENST00000512881 TMC4Q7Z404 712 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 CNTROBQ8N137 903 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 TSPYL6Q8N831 410 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 ZNRF3Q9ULT6 936 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 KCNH4Q9UQ05 1017 aa8.84□□□□□ -0.99
RFC1-215ENST00000512881 TMEM88BA6NKF7 163 aa8.83□□□□□ -1
RFC1-215ENST00000512881 TGFBR3LH3BV60 316 aa8.83□□□□□ -1
RFC1-215ENST00000512881 WEE1P30291 646 aa8.83□□□□□ -1
RFC1-215ENST00000512881 CXCL9Q07325 125 aa8.83□□□□□ -1
RFC1-215ENST00000512881 KIAA2012Q0VF49 1180 aa8.83□□□□□ -1
RFC1-215ENST00000512881 CCDC27Q2M243 656 aa8.83□□□□□ -1
RFC1-215ENST00000512881 ZBTB38Q8NAP3 1195 aaPredicted RBP8.83□□□□□ -1
RFC1-215ENST00000512881 CELF1Q92879 486 aaKnown RBP8.83□□□□□ -1
RFC1-215ENST00000512881 TSR2Q969E8 191 aaKnown RBP8.83□□□□□ -1
RFC1-215ENST00000512881 MYD88Q99836 296 aa8.83□□□□□ -1
RFC1-215ENST00000512881 NUP98P52948 1817 aa8.82□□□□□ -1
RFC1-215ENST00000512881 ANP32CO43423 234 aa8.82□□□□□ -1
RFC1-215ENST00000512881 DDX58O95786 925 aaKnown RBP8.82□□□□□ -1
RFC1-215ENST00000512881 HSP90B1P14625 803 aaKnown RBP8.82□□□□□ -1
RFC1-215ENST00000512881 RPS8P62241 208 aaKnown RBP8.82□□□□□ -1
RFC1-215ENST00000512881 USP50Q70EL3 339 aaPredicted RBP8.82□□□□□ -1
RFC1-215ENST00000512881 CCDC191Q8NCU4 936 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms