RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 RFXAPO00287 272 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 ACRP10323 421 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 TMPOP42166 694 aaKnown RBP11.92□□□□□ -0.5
CLCN3-208ENST00000512813 RGS3P49796 1198 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 GRB14Q14449 540 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 PPP4R3CPQ6ZMV5 832 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 TMEM199Q8N511 208 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 NPLOC4Q8TAT6 608 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 PAGR1Q9BTK6 254 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 DDTLA6NHG4 134 aaPredicted RBP11.91□□□□□ -0.5
CLCN3-208ENST00000512813 MYOGP15173 224 aa11.91□□□□□ -0.5
CLCN3-208ENST00000512813 RABGGTBP53611 331 aa11.91□□□□□ -0.5
CLCN3-208ENST00000512813 TCF15Q12870 199 aa11.91□□□□□ -0.5
CLCN3-208ENST00000512813 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
CLCN3-208ENST00000512813 OLFML2BQ68BL8 750 aa11.91□□□□□ -0.5
CLCN3-208ENST00000512813 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
CLCN3-208ENST00000512813 ZSCAN29Q8IWY8 852 aaPredicted RBP11.91□□□□□ -0.5
CLCN3-208ENST00000512813 ZNF594Q96JF6 807 aaPredicted RBP11.91□□□□□ -0.5
CLCN3-208ENST00000512813 OSBPL5Q9H0X9 879 aaPredicted RBP11.91□□□□□ -0.5
CLCN3-208ENST00000512813 USP40Q9NVE5 1235 aa11.91□□□□□ -0.5
CLCN3-208ENST00000512813 MYO15AQ9UKN7 3530 aa11.91□□□□□ -0.5
CLCN3-208ENST00000512813 ANKRD11Q6UB99 2663 aaPredicted RBP11.9□□□□□ -0.5
CLCN3-208ENST00000512813 EPOPA6NHQ4 379 aa11.9□□□□□ -0.5
CLCN3-208ENST00000512813 USP17L5A8MUK1 530 aa11.9□□□□□ -0.5
CLCN3-208ENST00000512813 TBC1D12O60347 775 aa11.9□□□□□ -0.5
CLCN3-208ENST00000512813 CCNA1P78396 465 aa11.9□□□□□ -0.5
CLCN3-208ENST00000512813 IL23AQ9NPF7 189 aa11.9□□□□□ -0.5
CLCN3-208ENST00000512813 CHMP3Q9Y3E7 222 aa11.9□□□□□ -0.5
CLCN3-208ENST00000512813 NDUFB9Q9Y6M9 179 aa11.9□□□□□ -0.5
CLCN3-208ENST00000512813 COL4A4P53420 1690 aaPredicted RBP11.9□□□□□ -0.5
CLCN3-208ENST00000512813 IL9P15248 144 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 ID4P47928 161 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 BACE1P56817 501 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 FOXO4P98177 505 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 MTMR2Q13614 643 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 LEXMQ3ZCV2 418 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 CAVIN4Q5BKX8 364 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 EPHA10Q5JZY3 1008 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 IER5LQ5T953 404 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 UBE2ZQ9H832 354 aaPredicted RBP11.89□□□□□ -0.51
CLCN3-208ENST00000512813 AS3MTQ9HBK9 375 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 TMOD4Q9NZQ9 345 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 RABGAP1Q9Y3P9 1069 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 IVNS1ABPQ9Y6Y0 642 aa11.89□□□□□ -0.51
CLCN3-208ENST00000512813 TECTAO75443 2155 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 MYH13Q9UKX3 1938 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 CFAP47Q6ZTR5 3102 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 APBB1O00213 710 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 FGBP02675 491 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 WDR78Q5VTH9 848 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 RNF180Q86T96 592 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 COL26A1Q96A83 441 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 WDR18Q9BV38 432 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 XPNPEP3Q9NQH7 507 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 FAM86C1Q9NVL1 165 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 PLXNA3P51805 1871 aa11.88□□□□□ -0.51
CLCN3-208ENST00000512813 MROH7Q68CQ1 1323 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 ZNF292O60281 2723 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-208ENST00000512813 CNMDO75829 334 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 CA3P07451 260 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 CAP2P40123 477 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 CCDC57Q2TAC2 916 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.87□□□□□ -0.51
CLCN3-208ENST00000512813 WDR66Q8TBY9 1149 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 STARD7Q9NQZ5 370 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 MBIPQ9NS73 344 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 ROBO3Q96MS0 1386 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 KMT2EQ8IZD2 1858 aa11.87□□□□□ -0.51
CLCN3-208ENST00000512813 WDR87Q6ZQQ6 2873 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 FAM196BA6NMK8 535 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 RARBP10826 455 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 PKN1Q16512 942 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 OTOP2Q7RTS6 562 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 BMP8AQ7Z5Y6 402 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 NUP133Q8WUM0 1156 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 TSEN34Q9BSV6 310 aaKnown RBP11.86□□□□□ -0.51
CLCN3-208ENST00000512813 PPP1R12CQ9BZL4 782 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 CERS4Q9HA82 394 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 DDX4Q9NQI0 724 aaKnown RBP11.86□□□□□ -0.51
CLCN3-208ENST00000512813 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 SLC4A7Q9Y6M7 1214 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 MROH5Q6ZUA9 1318 aa11.86□□□□□ -0.51
CLCN3-208ENST00000512813 MED19A0JLT2 244 aaPredicted RBP11.85□□□□□ -0.51
CLCN3-208ENST00000512813 GRXCR2A6NFK2 248 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 PROB1E7EW31 1015 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 LPXNO60711 386 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 PGK1P00558 417 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 PRDX5P30044 214 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 GRB10Q13322 594 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 TMEM67Q5HYA8 995 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 PTCRAQ6ISU1 281 aaPredicted RBP11.85□□□□□ -0.51
CLCN3-208ENST00000512813 LMBR1LQ6UX01 489 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 IRF2BPLQ9H1B7 796 aa11.85□□□□□ -0.51
CLCN3-208ENST00000512813 ALG13Q9NP73 1137 aaKnown RBP11.85□□□□□ -0.51
CLCN3-208ENST00000512813 ZNF536O15090 1300 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms