RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 NBPF11Q86T75 865 aa14.52□□□□□ -0.09
CDK7-208ENST00000512687 RAET1EQ8TD07 263 aa14.52□□□□□ -0.09
CDK7-208ENST00000512687 ACER1Q8TDN7 264 aa14.52□□□□□ -0.09
CDK7-208ENST00000512687 OTUD7AQ8TE49 926 aaPredicted RBP14.52□□□□□ -0.09
CDK7-208ENST00000512687 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDK7-208ENST00000512687 PUS7LQ9H0K6 701 aaKnown RBP14.52□□□□□ -0.09
CDK7-208ENST00000512687 TMOD4Q9NZQ9 345 aa14.52□□□□□ -0.09
CDK7-208ENST00000512687 ZNFX1Q9P2E3 1918 aaKnown RBP14.52□□□□□ -0.09
CDK7-208ENST00000512687 CYP2D7A0A087X1C5 515 aa14.51□□□□□ -0.09
CDK7-208ENST00000512687 TNPO2O14787 897 aaKnown RBP14.51□□□□□ -0.09
CDK7-208ENST00000512687 HOXA7P31268 230 aaPredicted RBP14.51□□□□□ -0.09
CDK7-208ENST00000512687 PABPC4Q13310 644 aaKnown RBP eCLIP14.51□□□□□ -0.09
CDK7-208ENST00000512687 RAB3GAP1Q15042 981 aa14.51□□□□□ -0.09
CDK7-208ENST00000512687 UBE3CQ15386 1083 aa14.51□□□□□ -0.09
CDK7-208ENST00000512687 DYNLL2Q96FJ2 89 aa14.51□□□□□ -0.09
CDK7-208ENST00000512687 P2RX7Q99572 595 aaKnown RBP14.51□□□□□ -0.09
CDK7-208ENST00000512687 TXNRD2Q9NNW7 524 aa14.51□□□□□ -0.09
CDK7-208ENST00000512687 PRR29P0C7W0 189 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 ELNP15502 786 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 GCLCP48506 637 aaPredicted RBP14.5□□□□□ -0.09
CDK7-208ENST00000512687 FLT3LGP49771 235 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 HERVK_113P62684 666 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 IRX3P78415 501 aaPredicted RBP14.5□□□□□ -0.09
CDK7-208ENST00000512687 SEPT2Q15019 361 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 USP17L2Q6R6M4 530 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 SHISA4Q96DD7 197 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 C12orf42Q96LP6 360 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 TMEM106CQ9BVX2 250 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 MORF4L1Q9UBU8 362 aa14.5□□□□□ -0.09
CDK7-208ENST00000512687 SALL3Q9BXA9 1300 aa14.49□□□□□ -0.09
CDK7-208ENST00000512687 ADCY3O60266 1144 aa14.49□□□□□ -0.09
CDK7-208ENST00000512687 CLEC10AQ8IUN9 316 aa14.49□□□□□ -0.09
CDK7-208ENST00000512687 KBTBD3Q8NAB2 608 aa14.49□□□□□ -0.09
CDK7-208ENST00000512687 PI4K2BQ8TCG2 481 aa14.49□□□□□ -0.09
CDK7-208ENST00000512687 KIAA1683Q9H0B3 1180 aa14.49□□□□□ -0.09
CDK7-208ENST00000512687 ATP8A2Q9NTI2 1148 aa14.49□□□□□ -0.09
CDK7-208ENST00000512687 A0A1W2PRG0 241 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 CCL5P13501 91 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 C12orf60Q5U649 245 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 ZSCAN25Q6NSZ9 544 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 SLAIN1Q8ND83 568 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 OSBP2Q969R2 916 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 GPATCH3Q96I76 525 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 FEZ1Q99689 392 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 CABP5Q9NP86 173 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 RBPJLQ9UBG7 517 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 SLC4A4Q9Y6R1 1079 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 PLXNA1Q9UIW2 1896 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 ZNF236Q9UL36 1845 aa14.48□□□□□ -0.09
CDK7-208ENST00000512687 TTC41PQ6P2S7 1318 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 USP17L12C9JPN9 530 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 USP17L21D6R901 530 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 MPHOSPH10O00566 681 aaKnown RBP14.47□□□□□ -0.09
CDK7-208ENST00000512687 CNMDO75829 334 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 AKR1B1P15121 316 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 VCAM1P19320 739 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 IRF5Q13568 498 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 STRBPQ96SI9 672 aaKnown RBP14.47□□□□□ -0.09
CDK7-208ENST00000512687 UNC93B1Q9H1C4 597 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 SWAP70Q9UH65 585 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 GJD2Q9UKL4 321 aa14.47□□□□□ -0.09
CDK7-208ENST00000512687 M0R2C6 588 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 RNF113AO15541 343 aaKnown RBP14.46□□□□□ -0.09
CDK7-208ENST00000512687 INHAP05111 366 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 CDK8P49336 464 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 USP14P54578 494 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 ERVK-24P63145 666 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 Q3C1V9 767 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 KIAA1755Q5JYT7 1200 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 PRPF38BQ5VTL8 546 aaKnown RBP14.46□□□□□ -0.09
CDK7-208ENST00000512687 CTR9Q6PD62 1173 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 C16orf86Q6ZW13 317 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 SIAH1Q8IUQ4 282 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 APPBP2Q92624 585 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 COA7Q96BR5 231 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 PAGR1Q9BTK6 254 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 PORCNQ9H237 461 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 EPB41L4AQ9HCS5 686 aaPredicted RBP14.46□□□□□ -0.09
CDK7-208ENST00000512687 BIN2Q9UBW5 565 aaPredicted RBP14.46□□□□□ -0.09
CDK7-208ENST00000512687 TAOK2Q9UL54 1235 aa14.46□□□□□ -0.09
CDK7-208ENST00000512687 GSG1L2A8MUP6 293 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 USP17L15C9J2P7 530 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 USP17L13C9JLJ4 530 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 USP17L11C9JVI0 530 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 USP17L18D6R9N7 530 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 USP17L22D6RA61 530 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 USP17L17D6RBQ6 530 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 USP17L19D6RCP7 530 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 USP17L20D6RJB6 530 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 PITPNM1O00562 1244 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 USP17L24Q0WX57 530 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 CATSPERGQ6ZRH7 1159 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 TMEM179Q6ZVK1 233 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 PXYLP1Q8TE99 480 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 RPAP3Q9H6T3 665 aaPredicted RBP14.45□□□□□ -0.1
CDK7-208ENST00000512687 ROBO3Q96MS0 1386 aa14.45□□□□□ -0.1
CDK7-208ENST00000512687 SPDYE16A6NNV3 312 aaPredicted RBP14.44□□□□□ -0.1
CDK7-208ENST00000512687 GPAA1O43292 621 aa14.44□□□□□ -0.1
CDK7-208ENST00000512687 MX1P20591 662 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms