RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 APBA2Q99767 749 aa15.26■□□□□ 0.03
VEGFA-216ENST00000512683 CWC22Q9HCG8 908 aaKnown RBP15.26■□□□□ 0.03
VEGFA-216ENST00000512683 STAP2Q9UGK3 403 aa15.26■□□□□ 0.03
VEGFA-216ENST00000512683 DOCK1Q14185 1865 aa15.26■□□□□ 0.03
VEGFA-216ENST00000512683 ZSWIM8A7E2V4 1837 aa15.26■□□□□ 0.03
VEGFA-216ENST00000512683 MAST2Q6P0Q8 1798 aa15.26■□□□□ 0.03
VEGFA-216ENST00000512683 STRNO43815 780 aa15.25■□□□□ 0.03
VEGFA-216ENST00000512683 MSCO60682 206 aa15.25■□□□□ 0.03
VEGFA-216ENST00000512683 CACNB2Q08289 660 aaPredicted RBP15.25■□□□□ 0.03
VEGFA-216ENST00000512683 TRIM32Q13049 653 aa15.25■□□□□ 0.03
VEGFA-216ENST00000512683 MFSD14CQ5VZR4 134 aa15.25■□□□□ 0.03
VEGFA-216ENST00000512683 AACSQ86V21 672 aa15.25■□□□□ 0.03
VEGFA-216ENST00000512683 CLASRPQ8N2M8 674 aaKnown RBP15.25■□□□□ 0.03
VEGFA-216ENST00000512683 MIGA1Q8NAN2 632 aa15.25■□□□□ 0.03
VEGFA-216ENST00000512683 DIS3LQ8TF46 1054 aaKnown RBP15.25■□□□□ 0.03
VEGFA-216ENST00000512683 RIOK1Q9BRS2 568 aaKnown RBP15.25■□□□□ 0.03
VEGFA-216ENST00000512683 CRNKL1Q9BZJ0 848 aaKnown RBP15.25■□□□□ 0.03
VEGFA-216ENST00000512683 TLR7Q9NYK1 1049 aaKnown RBP15.25■□□□□ 0.03
VEGFA-216ENST00000512683 RANBP2P49792 3224 aaKnown RBP15.25■□□□□ 0.03
VEGFA-216ENST00000512683 FOCADQ5VW36 1801 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 PHIPQ8WWQ0 1821 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 MAGEB6P1A0A0J9YX57 407 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 HMMRO75330 724 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 POLR3DP05423 398 aaPredicted RBP15.24■□□□□ 0.03
VEGFA-216ENST00000512683 COL6A1P12109 1028 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 PTPREP23469 700 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 GABPAQ06546 454 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 RAB3GAP1Q15042 981 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 LHX8Q68G74 356 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 RHPN1Q8TCX5 695 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 KIF1BPQ96EK5 621 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 PORCNQ9H237 461 aa15.24■□□□□ 0.03
VEGFA-216ENST00000512683 PTPRFP10586 1907 aa15.23■□□□□ 0.03
VEGFA-216ENST00000512683 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
VEGFA-216ENST00000512683 COG2Q14746 738 aa15.23■□□□□ 0.03
VEGFA-216ENST00000512683 LRIT3Q3SXY7 679 aa15.23■□□□□ 0.03
VEGFA-216ENST00000512683 SLC9C2Q5TAH2 1124 aa15.23■□□□□ 0.03
VEGFA-216ENST00000512683 POTEEQ6S8J3 1075 aa15.23■□□□□ 0.03
VEGFA-216ENST00000512683 ANTXR1Q9H6X2 564 aa15.23■□□□□ 0.03
VEGFA-216ENST00000512683 SWAP70Q9UH65 585 aa15.23■□□□□ 0.03
VEGFA-216ENST00000512683 IVNS1ABPQ9Y6Y0 642 aa15.23■□□□□ 0.03
VEGFA-216ENST00000512683 CNMDO75829 334 aa15.22■□□□□ 0.03
VEGFA-216ENST00000512683 VCAM1P19320 739 aa15.22■□□□□ 0.03
VEGFA-216ENST00000512683 SHMT1P34896 483 aa15.22■□□□□ 0.03
VEGFA-216ENST00000512683 PLCD1P51178 756 aa15.22■□□□□ 0.03
VEGFA-216ENST00000512683 MB21D1Q8N884 522 aa15.22■□□□□ 0.03
VEGFA-216ENST00000512683 EXOC6BQ9Y2D4 811 aa15.22■□□□□ 0.03
VEGFA-216ENST00000512683 ATAD5Q96QE3 1844 aa15.22■□□□□ 0.03
VEGFA-216ENST00000512683 IFIT2P09913 472 aaKnown RBP15.21■□□□□ 0.03
VEGFA-216ENST00000512683 PDE6AP16499 860 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 ATP2B2Q01814 1243 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 GRB14Q14449 540 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 SHROOM1Q2M3G4 852 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-216ENST00000512683 C7orf61Q8IZ16 206 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 SHCBP1Q8NEM2 672 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 LPAR1Q92633 364 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 CCDC17Q96LX7 622 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 ATP8A2Q9NTI2 1148 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 MCM9Q9NXL9 1143 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 SLC5A4Q9NY91 659 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 RCAN3Q9UKA8 241 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 SIPA1L1O43166 1804 aa15.21■□□□□ 0.03
VEGFA-216ENST00000512683 GUCY1A2P33402 732 aa15.2■□□□□ 0.02
VEGFA-216ENST00000512683 TMEM179Q6ZVK1 233 aa15.2■□□□□ 0.02
VEGFA-216ENST00000512683 ACER1Q8TDN7 264 aa15.2■□□□□ 0.02
VEGFA-216ENST00000512683 RPAP3Q9H6T3 665 aaPredicted RBP15.2■□□□□ 0.02
VEGFA-216ENST00000512683 SH2D4AQ9H788 454 aa15.2■□□□□ 0.02
VEGFA-216ENST00000512683 ZBTB40Q9NUA8 1239 aa15.2■□□□□ 0.02
VEGFA-216ENST00000512683 DDX19BQ9UMR2 479 aa15.2■□□□□ 0.02
VEGFA-216ENST00000512683 LOC285556D6RIA3 1793 aa15.2■□□□□ 0.02
VEGFA-216ENST00000512683 SPDYE16A6NNV3 312 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-216ENST00000512683 PEX10O60683 326 aa15.19■□□□□ 0.02
VEGFA-216ENST00000512683 IGHA2P01877 340 aa15.19■□□□□ 0.02
VEGFA-216ENST00000512683 CCND3P30281 292 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-216ENST00000512683 CCL14Q16627 93 aa15.19■□□□□ 0.02
VEGFA-216ENST00000512683 OLFML2BQ68BL8 750 aa15.19■□□□□ 0.02
VEGFA-216ENST00000512683 SIRT2Q8IXJ6 389 aa15.19■□□□□ 0.02
VEGFA-216ENST00000512683 TDHQ8IZJ6 230 aa15.19■□□□□ 0.02
VEGFA-216ENST00000512683 ABRAQ8N0Z2 381 aa15.19■□□□□ 0.02
VEGFA-216ENST00000512683 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.19■□□□□ 0.027e-41■□□□□ 10
VEGFA-216ENST00000512683 DCP1AQ9NPI6 582 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-216ENST00000512683 BTBD7Q9P203 1132 aa15.19■□□□□ 0.02
VEGFA-216ENST00000512683 DDX20Q9UHI6 824 aaKnown RBP15.19■□□□□ 0.02
VEGFA-216ENST00000512683 ZMYND8Q9ULU4 1186 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-216ENST00000512683 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
VEGFA-216ENST00000512683 PFASO15067 1338 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 ZNF532Q9HCE3 1301 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 MGAMO43451 1857 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 TCRBV5S4A2TA0A5A2 114 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 MAGEA10P43363 369 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-216ENST00000512683 SEPT2Q15019 361 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 ZYXQ15942 572 aaKnown RBP15.18■□□□□ 0.02
VEGFA-216ENST00000512683 DPP9Q86TI2 863 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 AMOTL1Q8IY63 956 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 ARRDC4Q8NCT1 418 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 MROH8Q9H579 483 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 IL1RAPL2Q9NP60 686 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 TMX2Q9Y320 296 aa15.18■□□□□ 0.02
VEGFA-216ENST00000512683 MYH1P12882 1939 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms