RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 NR2E3Q9Y5X4 410 aa17.81■□□□□ 0.44
CCHCR1-229ENST00000512418 USP17L15C9J2P7 530 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 USP17L13C9JLJ4 530 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 USP17L11C9JVI0 530 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 USP17L18D6R9N7 530 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 USP17L22D6RA61 530 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 USP17L17D6RBQ6 530 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 USP17L19D6RCP7 530 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 USP17L20D6RJB6 530 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 XRCC5P13010 732 aaKnown RBP17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 CYP2B6P20813 491 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 GABPAQ06546 454 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 USP17L24Q0WX57 530 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 CCAR1Q8IX12 1150 aaKnown RBP17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 PAGR1Q9BTK6 254 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 BCL11AQ9H165 835 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 HMX1Q9NP08 348 aaPredicted RBP17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 MCM9Q9NXL9 1143 aa17.8■□□□□ 0.44
CCHCR1-229ENST00000512418 RANBP2P49792 3224 aaKnown RBP17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 VCAM1P19320 739 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 TRIM32Q13049 653 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 Q3C1V9 767 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 POTEEQ6S8J3 1075 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 GPR142Q7Z601 462 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 LCORLQ8N3X6 602 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 ANKLE1Q8NAG6 615 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 ACER1Q8TDN7 264 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 SDR42E1Q8WUS8 393 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 EDC3Q96F86 508 aaKnown RBP17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 PORCNQ9H237 461 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 DCP1AQ9NPI6 582 aaPredicted RBP17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 RABGAP1Q9Y3P9 1069 aa17.79■□□□□ 0.44
CCHCR1-229ENST00000512418 ATP5JP18859 108 aa17.78■□□□□ 0.44
CCHCR1-229ENST00000512418 MAP3K21Q5TCX8 1036 aa17.78■□□□□ 0.44
CCHCR1-229ENST00000512418 CATSPERGQ6ZRH7 1159 aa17.78■□□□□ 0.44
CCHCR1-229ENST00000512418 TRMT44Q8IYL2 757 aaKnown RBP17.78■□□□□ 0.44
CCHCR1-229ENST00000512418 PAWRQ96IZ0 340 aaKnown RBP17.78■□□□□ 0.44
CCHCR1-229ENST00000512418 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.78■□□□□ 0.442e-6■■■■■ 28
CCHCR1-229ENST00000512418 BOLA2Q9H3K6 86 aa17.78■□□□□ 0.44
CCHCR1-229ENST00000512418 TRIOBPQ9H2D6 2365 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 EVI5O60447 810 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 PRKAR2AP13861 404 aaKnown RBP17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 ZKSCAN1P17029 563 aaPredicted RBP17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 GUCY1A2P33402 732 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 ADD2P35612 726 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 RGS2P41220 211 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 CCNA1P78396 465 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 LBX2Q6XYB7 198 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 NECAB2Q7Z6G3 386 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 PLEKHH3Q7Z736 793 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 USP6NLQ92738 828 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 HAUS7Q99871 368 aa17.77■□□□□ 0.44
CCHCR1-229ENST00000512418 MPHOSPH10O00566 681 aaKnown RBP17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 CNMDO75829 334 aa17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 EVX2Q03828 476 aa17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 SEPT2Q15019 361 aa17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 MORN1Q5T089 497 aa17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 DIS3LQ8TF46 1054 aaKnown RBP17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 APBA2Q99767 749 aa17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 LRRCC1Q9C099 1032 aa17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 RPAP3Q9H6T3 665 aaPredicted RBP17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 ARMT1Q9H993 441 aa17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 CWC22Q9HCG8 908 aaKnown RBP17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 ATP8A2Q9NTI2 1148 aa17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 SWAP70Q9UH65 585 aa17.76■□□□□ 0.43
CCHCR1-229ENST00000512418 GLRX3O76003 335 aaKnown RBP17.75■□□□□ 0.43
CCHCR1-229ENST00000512418 MBD4O95243 580 aa17.75■□□□□ 0.43
CCHCR1-229ENST00000512418 C20orf194Q5TEA3 1177 aa17.75■□□□□ 0.43
CCHCR1-229ENST00000512418 TMEM179Q6ZVK1 233 aa17.75■□□□□ 0.43
CCHCR1-229ENST00000512418 RBM27Q9P2N5 1060 aaKnown RBP17.75■□□□□ 0.43
CCHCR1-229ENST00000512418 SPDYE16A6NNV3 312 aaPredicted RBP17.74■□□□□ 0.43
CCHCR1-229ENST00000512418 CYP2D6P10635 497 aa17.74■□□□□ 0.43
CCHCR1-229ENST00000512418 UBE3CQ15386 1083 aa17.74■□□□□ 0.43
CCHCR1-229ENST00000512418 SLC44A5Q8NCS7 719 aa17.74■□□□□ 0.43
CCHCR1-229ENST00000512418 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
CCHCR1-229ENST00000512418 OGDHLQ9ULD0 1010 aa17.74■□□□□ 0.43
CCHCR1-229ENST00000512418 MYH7P12883 1935 aa17.74■□□□□ 0.43
CCHCR1-229ENST00000512418 MYH8P13535 1937 aa17.74■□□□□ 0.43
CCHCR1-229ENST00000512418 ALPK3Q96L96 1907 aa17.73■□□□□ 0.43
CCHCR1-229ENST00000512418 A0A1W2PRG0 241 aa17.73■□□□□ 0.43
CCHCR1-229ENST00000512418 MAP2K5Q13163 448 aa17.73■□□□□ 0.43
CCHCR1-229ENST00000512418 CCL14Q16627 93 aa17.73■□□□□ 0.43
CCHCR1-229ENST00000512418 SLFNL1Q499Z3 407 aa17.73■□□□□ 0.43
CCHCR1-229ENST00000512418 WDR78Q5VTH9 848 aa17.73■□□□□ 0.43
CCHCR1-229ENST00000512418 AMOTL1Q8IY63 956 aa17.73■□□□□ 0.43
CCHCR1-229ENST00000512418 PRO3102Q9H379 93 aa17.73■□□□□ 0.43
CCHCR1-229ENST00000512418 BTBD7Q9P203 1132 aa17.73■□□□□ 0.43
CCHCR1-229ENST00000512418 BAZ2AQ9UIF9 1905 aaKnown RBP17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 SLC15A5A6NIM6 579 aa17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 PRKAB2O43741 272 aa17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 MNX1P50219 401 aaPredicted RBP17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 CACNB2Q08289 660 aaPredicted RBP17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 ZSCAN25Q6NSZ9 544 aa17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 DYNLL2Q96FJ2 89 aa17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 DDRGK1Q96HY6 314 aa17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 C11orf49Q9H6J7 331 aa17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 IVNS1ABPQ9Y6Y0 642 aa17.72■□□□□ 0.43
CCHCR1-229ENST00000512418 SZT2Q5T011 3432 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms