RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 SLFNL1Q499Z3 407 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 MFSD6Q6ZSS7 791 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 PRRT2Q7Z6L0 340 aaPredicted RBP8.85□□□□□ -0.99
NR1I3-231ENST00000512340 SMCR8Q8TEV9 937 aaPredicted RBP8.85□□□□□ -0.99
NR1I3-231ENST00000512340 BRI3BPQ8WY22 251 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 ERO1AQ96HE7 468 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 MS4A4AQ96JQ5 239 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 SEC62Q99442 399 aaKnown RBP8.85□□□□□ -0.99
NR1I3-231ENST00000512340 CFHR5Q9BXR6 569 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 CNNM2Q9H8M5 875 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 GOPCQ9HD26 462 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 AGTPBP1Q9UPW5 1226 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 U3KPZ7 1027 aaPredicted RBP8.85□□□□□ -0.99
NR1I3-231ENST00000512340 CDK5RAP2Q96SN8 1893 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 ROBO3Q96MS0 1386 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 TSPY2A6NKD2 308 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 BTBD19C9JJ37 291 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 PDHXO00330 501 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 FKTNO75072 461 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 CDC45O75419 566 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 CYP2D6P10635 497 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 CHMLP26374 656 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 GCLCP48506 637 aaPredicted RBP8.84□□□□□ -0.99
NR1I3-231ENST00000512340 HMGCS2P54868 508 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 ATP2B2Q01814 1243 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 DOCK1Q14185 1865 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 RNF20Q5VTR2 975 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 CCDC129Q6ZRS4 1044 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 CCAR1Q8IX12 1150 aaKnown RBP8.84□□□□□ -0.99
NR1I3-231ENST00000512340 CNKSR2Q8WXI2 1034 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 LPAR1Q92633 364 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 ESR2Q92731 530 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 KRT23Q9C075 422 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 DNAJC18Q9H819 358 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 ANAPC4Q9UJX5 808 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 SYNPO2Q9UMS6 1093 aa8.84□□□□□ -0.99
NR1I3-231ENST00000512340 OTOFQ9HC10 1997 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 USP17L15C9J2P7 530 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 USP17L13C9JLJ4 530 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 USP17L11C9JVI0 530 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 USP17L18D6R9N7 530 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 USP17L22D6RA61 530 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 USP17L17D6RBQ6 530 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 USP17L19D6RCP7 530 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 USP17L20D6RJB6 530 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 RAD21O60216 631 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 RANBP6O60518 1105 aaKnown RBP8.83□□□□□ -1
NR1I3-231ENST00000512340 TBC1D8O95759 1140 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 FGAP02671 866 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 CHGBP05060 677 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 GSPT1P15170 499 aaKnown RBP8.83□□□□□ -1
NR1I3-231ENST00000512340 HOXD10P28358 340 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 GJA5P36382 358 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 USP17L24Q0WX57 530 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 MTMR2Q13614 643 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 SEPT2Q15019 361 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 PPP4R3CPQ6ZMV5 832 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 IQCA1Q86XH1 822 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 DYNLL2Q96FJ2 89 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 ZIC5Q96T25 663 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 KIAA1683Q9H0B3 1180 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 EPB41L4AQ9HCS5 686 aaPredicted RBP8.83□□□□□ -1
NR1I3-231ENST00000512340 TSKSQ9UJT2 592 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 CTDP1Q9Y5B0 961 aaPredicted RBP8.83□□□□□ -1
NR1I3-231ENST00000512340 MYH8P13535 1937 aa8.83□□□□□ -1
NR1I3-231ENST00000512340 BAZ2AQ9UIF9 1905 aaKnown RBP8.83□□□□□ -1
NR1I3-231ENST00000512340 CYP2D7A0A087X1C5 515 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 ERICH2A1L162 156 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 GPR25O00155 361 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 IGF2BP3O00425 579 aaKnown RBP eCLIP8.82□□□□□ -1
NR1I3-231ENST00000512340 ORC4O43929 436 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 TLR2O60603 784 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 REC8O95072 547 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 TTLL1O95922 423 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 GNRH1P01148 92 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 AKR1B1P15121 316 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 CCNA1P78396 465 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 TFAP4Q01664 338 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 SP3Q02447 781 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 CRHR2Q13324 411 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 SART3Q15020 963 aaKnown RBP8.82□□□□□ -1
NR1I3-231ENST00000512340 RRP12Q5JTH9 1297 aaKnown RBP8.82□□□□□ -1
NR1I3-231ENST00000512340 AKNAD1Q5T1N1 836 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 CTU1Q7Z7A3 348 aaKnown RBP8.82□□□□□ -1
NR1I3-231ENST00000512340 RALYLQ86SE5 291 aaKnown RBP8.82□□□□□ -1
NR1I3-231ENST00000512340 STK11IPQ8N1F8 1099 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 NEDD1Q8NHV4 660 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 CWC22Q9HCG8 908 aaKnown RBP8.82□□□□□ -1
NR1I3-231ENST00000512340 HOXC10Q9NYD6 342 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 NYAP2Q9P242 653 aa8.82□□□□□ -1
NR1I3-231ENST00000512340 SGSM2O43147 1006 aa8.81□□□□□ -1
NR1I3-231ENST00000512340 PRDM1O75626 825 aa8.81□□□□□ -1
NR1I3-231ENST00000512340 ZKSCAN1P17029 563 aaPredicted RBP8.81□□□□□ -1
NR1I3-231ENST00000512340 RASA1P20936 1047 aa8.81□□□□□ -1
NR1I3-231ENST00000512340 HOXA7P31268 230 aaPredicted RBP8.81□□□□□ -1
NR1I3-231ENST00000512340 PRMT2P55345 433 aa8.81□□□□□ -1
NR1I3-231ENST00000512340 ZYXQ15942 572 aaKnown RBP8.81□□□□□ -1
NR1I3-231ENST00000512340 VPS53Q5VIR6 699 aa8.81□□□□□ -1
NR1I3-231ENST00000512340 ZNF589Q86UQ0 364 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms