RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 POTEEQ6S8J3 1075 aa12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 TBC1D9Q6ZT07 1266 aa12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 WDR66Q8TBY9 1149 aa12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 EAF2Q96CJ1 260 aaPredicted RBP12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 P2RX7Q99572 595 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 ZNF576Q9H609 170 aa12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 IL1RAPL2Q9NP60 686 aa12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 LAMA2P24043 3122 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 TRIM43BA6NCK2 446 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 ENTPD3O75355 529 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 PDE8BO95263 885 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 LDHBP07195 334 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 IFIT2P09913 472 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 DNAJB2P25686 324 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 RGS2P41220 211 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 MAP3K10Q02779 954 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 TRIM60Q495X7 471 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 TNNI3KQ59H18 835 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 CASC1Q6TDU7 716 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 SLC39A5Q6ZMH5 540 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 GPR142Q7Z601 462 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 ZNF280CQ8ND82 737 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 GPRC5AQ8NFJ5 357 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 USP6NLQ92738 828 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 TRIM43Q96BQ3 446 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 GAS2L1Q99501 681 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 PAGR1Q9BTK6 254 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 C1QTNF1Q9BXJ1 281 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 PORCNQ9H237 461 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 CWC22Q9HCG8 908 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 DDX4Q9NQI0 724 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 DDX20Q9UHI6 824 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 HCN4Q9Y3Q4 1203 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 NDUFB9Q9Y6M9 179 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 FPGT-TNNI3KV9GXZ4 949 aa12.61□□□□□ -0.39
PDLIM5-217ENST00000512274 APBB1O00213 710 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 IFIT1P09914 478 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 ATP5JP18859 108 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 EPHB4P54760 987 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 ANO1Q5XXA6 986 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 PLEKHH3Q7Z736 793 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 ALYREFQ86V81 257 aaKnown RBP12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 VGLL2Q8N8G2 317 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 LPAR1Q92633 364 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 APBA2Q99767 749 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 PRDM12Q9H4Q4 367 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 PDLIM7Q9NR12 457 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 FLRT1Q9NZU1 646 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 AKAP2Q9Y2D5 859 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 SYNGAP1Q96PV0 1343 aa12.6□□□□□ -0.39
PDLIM5-217ENST00000512274 PLXNA1Q9UIW2 1896 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 DNM1LO00429 736 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 ITGB8P26012 769 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 MAPK4P31152 587 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 MORN1Q5T089 497 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 AACSQ86V21 672 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 IL17RAQ96F46 866 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 DDRGK1Q96HY6 314 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 ZNF512BQ96KM6 892 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 LRFN3Q9BTN0 628 aa12.59□□□□□ -0.39
PDLIM5-217ENST00000512274 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 SEC24BO95487 1268 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 IGFBP4P22692 258 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 HERVK_113P62684 666 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 ERVK-24P63145 666 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 TFCP2Q12800 502 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 WDR78Q5VTH9 848 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 FERMT2Q96AC1 680 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 TIFAQ96CG3 184 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 EDC3Q96F86 508 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 OSBPL5Q9H0X9 879 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 EPHX3Q9H6B9 360 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 RBPJLQ9UBG7 517 aa12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 DBNLQ9UJU6 430 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-217ENST00000512274 TTC28Q96AY4 2481 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 KBTBD13C9JR72 458 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 HIP1O00291 1037 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 REC8O95072 547 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 FGFR2P21802 821 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 CYP2C19P33261 490 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 MAP2K5Q13163 448 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 MTMR2Q13614 643 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 RRP1BQ14684 758 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 SH3D19Q5HYK7 790 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
PDLIM5-217ENST00000512274 CEP126Q9P2H0 1117 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms