RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 MYCP01106 439 aaPredicted RBP23.2■■□□□ 1.3
SMAD1-211ENST00000512019 CTGFP29279 349 aa23.2■■□□□ 1.3
SMAD1-211ENST00000512019 MOGSQ13724 837 aa23.2■■□□□ 1.3
SMAD1-211ENST00000512019 ARHGEF6Q15052 776 aa23.2■■□□□ 1.3
SMAD1-211ENST00000512019 RNF20Q5VTR2 975 aa23.2■■□□□ 1.3
SMAD1-211ENST00000512019 CPA4Q9UI42 421 aa23.2■■□□□ 1.3
SMAD1-211ENST00000512019 KCNH4Q9UQ05 1017 aa23.2■■□□□ 1.3
SMAD1-211ENST00000512019 SLURP2P0DP57 97 aa23.19■■□□□ 1.3
SMAD1-211ENST00000512019 HAND2P61296 217 aa23.19■■□□□ 1.3
SMAD1-211ENST00000512019 MAP3K10Q02779 954 aa23.19■■□□□ 1.3
SMAD1-211ENST00000512019 GABPAQ06546 454 aa23.19■■□□□ 1.3
SMAD1-211ENST00000512019 PDE4BQ07343 736 aa23.19■■□□□ 1.3
SMAD1-211ENST00000512019 NOL9Q5SY16 702 aaKnown RBP23.19■■□□□ 1.3
SMAD1-211ENST00000512019 C16orf86Q6ZW13 317 aa23.19■■□□□ 1.3
SMAD1-211ENST00000512019 SH3TC2Q8TF17 1288 aa23.19■■□□□ 1.3
SMAD1-211ENST00000512019 ADGRA2Q96PE1 1338 aa23.18■■□□□ 1.3
SMAD1-211ENST00000512019 PDHXO00330 501 aa23.18■■□□□ 1.3
SMAD1-211ENST00000512019 PCP11498 1178 aaKnown RBP23.18■■□□□ 1.3
SMAD1-211ENST00000512019 MCCP23508 829 aa23.18■■□□□ 1.3
SMAD1-211ENST00000512019 EVX2Q03828 476 aa23.18■■□□□ 1.3
SMAD1-211ENST00000512019 C17orf99Q6UX52 265 aa23.18■■□□□ 1.3
SMAD1-211ENST00000512019 ANKRD23Q86SG2 305 aa23.18■■□□□ 1.3
SMAD1-211ENST00000512019 DYNLL2Q96FJ2 89 aa23.18■■□□□ 1.3
SMAD1-211ENST00000512019 TMEM106CQ9BVX2 250 aa23.18■■□□□ 1.3
SMAD1-211ENST00000512019 RNF41Q9H4P4 317 aaPredicted RBP23.18■■□□□ 1.3
SMAD1-211ENST00000512019 FAM196BA6NMK8 535 aa23.17■■□□□ 1.3
SMAD1-211ENST00000512019 CTDSPL2Q05D32 466 aa23.17■■□□□ 1.3
SMAD1-211ENST00000512019 KIF22Q14807 665 aa23.17■■□□□ 1.3
SMAD1-211ENST00000512019 NECTIN1Q15223 517 aa23.17■■□□□ 1.3
SMAD1-211ENST00000512019 DNAJC18Q9H819 358 aa23.17■■□□□ 1.3
SMAD1-211ENST00000512019 CYP21A2P08686 494 aa23.16■■□□□ 1.3
SMAD1-211ENST00000512019 CDK8P49336 464 aa23.16■■□□□ 1.3
SMAD1-211ENST00000512019 CREB3L3Q68CJ9 461 aa23.16■■□□□ 1.3
SMAD1-211ENST00000512019 NBPF11Q86T75 865 aa23.16■■□□□ 1.3
SMAD1-211ENST00000512019 USP26Q9BXU7 913 aa23.16■■□□□ 1.3
SMAD1-211ENST00000512019 PHF20L1A8MW92 1017 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 SMIM22K7EJ46 135 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 SLC27A2O14975 620 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 ZKSCAN1P17029 563 aaPredicted RBP23.15■■□□□ 1.3
SMAD1-211ENST00000512019 AKNAD1Q5T1N1 836 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 MFSD6Q6ZSS7 791 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 TBC1D10CQ8IV04 446 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 STK11IPQ8N1F8 1099 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 SLC44A5Q8NCS7 719 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 STAG1Q8WVM7 1258 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 UPF2Q9HAU5 1272 aaKnown RBP23.15■■□□□ 1.3
SMAD1-211ENST00000512019 MKNK2Q9HBH9 465 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 ATAD5Q96QE3 1844 aa23.15■■□□□ 1.3
SMAD1-211ENST00000512019 MYH8P13535 1937 aa23.14■■□□□ 1.3
SMAD1-211ENST00000512019 SEC24BO95487 1268 aa23.14■■□□□ 1.29
SMAD1-211ENST00000512019 SHMT1P34896 483 aa23.14■■□□□ 1.29
SMAD1-211ENST00000512019 HSPA4P34932 840 aa23.14■■□□□ 1.29
SMAD1-211ENST00000512019 GPAT2Q6NUI2 795 aa23.14■■□□□ 1.29
SMAD1-211ENST00000512019 TATDN1Q6P1N9 297 aa23.14■■□□□ 1.29
SMAD1-211ENST00000512019 BACH2Q9BYV9 841 aa23.14■■□□□ 1.29
SMAD1-211ENST00000512019 NBPF3Q9H094 633 aa23.14■■□□□ 1.29
SMAD1-211ENST00000512019 PSMC4P43686 418 aa23.13■■□□□ 1.29
SMAD1-211ENST00000512019 NT5C2P49902 561 aa23.13■■□□□ 1.29
SMAD1-211ENST00000512019 TRIM47Q96LD4 638 aa23.13■■□□□ 1.29
SMAD1-211ENST00000512019 CNNM2Q9H8M5 875 aa23.13■■□□□ 1.29
SMAD1-211ENST00000512019 TOMM22Q9NS69 142 aa23.13■■□□□ 1.29
SMAD1-211ENST00000512019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.13■■□□□ 1.29
SMAD1-211ENST00000512019 ORC4O43929 436 aa23.12■■□□□ 1.29
SMAD1-211ENST00000512019 FGRP09769 529 aa23.12■■□□□ 1.29
SMAD1-211ENST00000512019 CYP2C8P10632 490 aa23.12■■□□□ 1.29
SMAD1-211ENST00000512019 CERKLQ49MI3 558 aaPredicted RBP23.12■■□□□ 1.29
SMAD1-211ENST00000512019 SCYL3Q8IZE3 742 aa23.12■■□□□ 1.29
SMAD1-211ENST00000512019 CCDC17Q96LX7 622 aa23.12■■□□□ 1.29
SMAD1-211ENST00000512019 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.12■■□□□ 1.29
SMAD1-211ENST00000512019 ZHX2Q9Y6X8 837 aa23.12■■□□□ 1.29
SMAD1-211ENST00000512019 CTNND1O60716 968 aaKnown RBP23.11■■□□□ 1.29
SMAD1-211ENST00000512019 PRDM1O75626 825 aa23.11■■□□□ 1.29
SMAD1-211ENST00000512019 GNRH1P01148 92 aa23.11■■□□□ 1.29
SMAD1-211ENST00000512019 OSBPP22059 807 aa23.11■■□□□ 1.29
SMAD1-211ENST00000512019 TRDNQ13061 729 aa23.11■■□□□ 1.29
SMAD1-211ENST00000512019 ZNF444Q8N0Y2 327 aaPredicted RBP23.11■■□□□ 1.29
SMAD1-211ENST00000512019 KRT23Q9C075 422 aa23.11■■□□□ 1.29
SMAD1-211ENST00000512019 SRRDQ9UH36 339 aa23.11■■□□□ 1.29
SMAD1-211ENST00000512019 NEDD4P46934 1319 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 CXCL11O14625 94 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 PTPRAP18433 802 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 RASA1P20936 1047 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 CAP2P40123 477 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 PRMT2P55345 433 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 KRT32Q14532 448 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 MTFR1Q15390 333 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 RRP12Q5JTH9 1297 aaKnown RBP23.1■■□□□ 1.29
SMAD1-211ENST00000512019 RALYLQ86SE5 291 aaKnown RBP23.1■■□□□ 1.29
SMAD1-211ENST00000512019 KCNB2Q92953 911 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 GINM1Q9NU53 330 aa23.1■■□□□ 1.29
SMAD1-211ENST00000512019 A0A0G2JLL6 359 aaPredicted RBP23.09■■□□□ 1.29
SMAD1-211ENST00000512019 E7EWF7 191 aa23.09■■□□□ 1.29
SMAD1-211ENST00000512019 FMNL1O95466 1100 aaPredicted RBP23.09■■□□□ 1.29
SMAD1-211ENST00000512019 BCRP11274 1271 aa23.09■■□□□ 1.29
SMAD1-211ENST00000512019 ABCB5Q2M3G0 1257 aa23.09■■□□□ 1.29
SMAD1-211ENST00000512019 TSGA10IPQ3SY00 556 aa23.09■■□□□ 1.29
SMAD1-211ENST00000512019 PRRT2Q7Z6L0 340 aaPredicted RBP23.09■■□□□ 1.29
SMAD1-211ENST00000512019 CCDC84Q86UT8 332 aaPredicted RBP23.09■■□□□ 1.29
SMAD1-211ENST00000512019 ESR2Q92731 530 aa23.09■■□□□ 1.29
SMAD1-211ENST00000512019 CABP5Q9NP86 173 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms