RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 GRK4P32298 578 aa11.97□□□□□ -0.49
COPS4-211ENST00000511891 SHMT1P34896 483 aa11.97□□□□□ -0.49
COPS4-211ENST00000511891 RRP1P56182 461 aaKnown RBP11.97□□□□□ -0.49
COPS4-211ENST00000511891 MTFR1Q15390 333 aa11.97□□□□□ -0.49
COPS4-211ENST00000511891 ZYXQ15942 572 aaKnown RBP11.97□□□□□ -0.49
COPS4-211ENST00000511891 CERKLQ49MI3 558 aaPredicted RBP11.97□□□□□ -0.49
COPS4-211ENST00000511891 DCP1AQ9NPI6 582 aaPredicted RBP11.97□□□□□ -0.49
COPS4-211ENST00000511891 EMILIN3Q9NT22 766 aa11.97□□□□□ -0.49
COPS4-211ENST00000511891 GINM1Q9NU53 330 aa11.97□□□□□ -0.49
COPS4-211ENST00000511891 TMOD4Q9NZQ9 345 aa11.97□□□□□ -0.49
COPS4-211ENST00000511891 DDX60LQ5H9U9 1706 aaKnown RBP11.97□□□□□ -0.49
COPS4-211ENST00000511891 MGAMO43451 1857 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 C19orf81C9J6K1 198 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 USP17L10C9JJH3 530 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 SMIM22K7EJ46 135 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 FLT3LGP49771 235 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 IRX3P78415 501 aaPredicted RBP11.96□□□□□ -0.49
COPS4-211ENST00000511891 PABPC4Q13310 644 aaKnown RBP eCLIP11.96□□□□□ -0.49
COPS4-211ENST00000511891 RAB3GAP1Q15042 981 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 FAM110CQ1W6H9 321 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 ABCB5Q2M3G0 1257 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 SLC44A5Q8NCS7 719 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 ACER1Q8TDN7 264 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 P2RX7Q99572 595 aaKnown RBP11.96□□□□□ -0.49
COPS4-211ENST00000511891 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.96□□□□□ -0.49
COPS4-211ENST00000511891 ECHDC1Q9NTX5 307 aa11.96□□□□□ -0.49
COPS4-211ENST00000511891 BIN2Q9UBW5 565 aaPredicted RBP11.96□□□□□ -0.49
COPS4-211ENST00000511891 NAV1Q8NEY1 1877 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 CYP2D7A0A087X1C5 515 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 ELNP15502 786 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 GUCY1A2P33402 732 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 GCLCP48506 637 aaPredicted RBP11.95□□□□□ -0.5
COPS4-211ENST00000511891 GABPAQ06546 454 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 USP17L2Q6R6M4 530 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 DYNLL2Q96FJ2 89 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 CRBNQ96SW2 442 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 FEZ1Q99689 392 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
COPS4-211ENST00000511891 RBBP6Q7Z6E9 1792 aaKnown RBP11.95□□□□□ -0.5
COPS4-211ENST00000511891 ADCY3O60266 1144 aa11.94□□□□□ -0.5
COPS4-211ENST00000511891 HOXA7P31268 230 aaPredicted RBP11.94□□□□□ -0.5
COPS4-211ENST00000511891 SEPT2Q15019 361 aa11.94□□□□□ -0.5
COPS4-211ENST00000511891 UBE3CQ15386 1083 aa11.94□□□□□ -0.5
COPS4-211ENST00000511891 POTEEQ6S8J3 1075 aa11.94□□□□□ -0.5
COPS4-211ENST00000511891 OTUD7AQ8TE49 926 aaPredicted RBP11.94□□□□□ -0.5
COPS4-211ENST00000511891 PUS7LQ9H0K6 701 aaKnown RBP11.94□□□□□ -0.5
COPS4-211ENST00000511891 TXNRD2Q9NNW7 524 aa11.94□□□□□ -0.5
COPS4-211ENST00000511891 CABP5Q9NP86 173 aa11.94□□□□□ -0.5
COPS4-211ENST00000511891 PDE4DIPQ5VU43 2346 aa11.93□□□□□ -0.5
COPS4-211ENST00000511891 MPHOSPH10O00566 681 aaKnown RBP11.93□□□□□ -0.5
COPS4-211ENST00000511891 CCL5P13501 91 aa11.93□□□□□ -0.5
COPS4-211ENST00000511891 HERVK_113P62684 666 aa11.93□□□□□ -0.5
COPS4-211ENST00000511891 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
COPS4-211ENST00000511891 COA7Q96BR5 231 aa11.93□□□□□ -0.5
COPS4-211ENST00000511891 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
COPS4-211ENST00000511891 UNC93B1Q9H1C4 597 aa11.93□□□□□ -0.5
COPS4-211ENST00000511891 SLC4A4Q9Y6R1 1079 aa11.93□□□□□ -0.5
COPS4-211ENST00000511891 USP17L12C9JPN9 530 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 USP17L21D6R901 530 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 INHAP05111 366 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 Q3C1V9 767 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 PRPF38BQ5VTL8 546 aaKnown RBP11.92□□□□□ -0.5
COPS4-211ENST00000511891 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 CLEC10AQ8IUN9 316 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 SHISA4Q96DD7 197 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 C12orf42Q96LP6 360 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 PAGR1Q9BTK6 254 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 KIAA1683Q9H0B3 1180 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 RNF208Q9H0X6 261 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 ATP8A2Q9NTI2 1148 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 RBPJLQ9UBG7 517 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 MORF4L1Q9UBU8 362 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 CENPFP49454 3210 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 DOCK3Q8IZD9 2030 aa11.92□□□□□ -0.5
COPS4-211ENST00000511891 A0A1W2PRG0 241 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 ST18O60284 1047 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 AKR1B1P15121 316 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 VCAM1P19320 739 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 UBXN2AP68543 259 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 IRF5Q13568 498 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 C12orf60Q5U649 245 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 KBTBD3Q8NAB2 608 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 GPRC5AQ8NFJ5 357 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 OSBP2Q969R2 916 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 GJD2Q9UKL4 321 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 MYH7P12883 1935 aa11.91□□□□□ -0.5
COPS4-211ENST00000511891 BAZ2AQ9UIF9 1905 aaKnown RBP11.91□□□□□ -0.5
COPS4-211ENST00000511891 USP17L15C9J2P7 530 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 USP17L13C9JLJ4 530 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 USP17L11C9JVI0 530 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 USP17L18D6R9N7 530 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 USP17L22D6RA61 530 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 USP17L17D6RBQ6 530 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 USP17L19D6RCP7 530 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 USP17L20D6RJB6 530 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 RNF113AO15541 343 aaKnown RBP11.9□□□□□ -0.5
COPS4-211ENST00000511891 CNMDO75829 334 aa11.9□□□□□ -0.5
COPS4-211ENST00000511891 CDK8P49336 464 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms