RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 UBTFL1P0CB47 393 aaPredicted RBP14.27□□□□□ -0.12
RNF4-216ENST00000511859 CYBAP13498 195 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 PLCG2P16885 1265 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 GRIN2CQ14957 1233 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 TRIM60Q495X7 471 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 LBX2Q6XYB7 198 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 CRACR2BQ8N4Y2 399 aaPredicted RBP14.27□□□□□ -0.12
RNF4-216ENST00000511859 TRPV1Q8NER1 839 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 TRIM43Q96BQ3 446 aaPredicted RBP14.27□□□□□ -0.12
RNF4-216ENST00000511859 FAM122AQ96E09 287 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 C12orf42Q96LP6 360 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 RNPC3Q96LT9 517 aaKnown RBP14.27□□□□□ -0.12
RNF4-216ENST00000511859 RAI14Q9P0K7 980 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 HMG20BQ9P0W2 317 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 ZBTB21Q9ULJ3 1066 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 NDUFB9Q9Y6M9 179 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 SEPT4O43236 478 aa14.26□□□□□ -0.13
RNF4-216ENST00000511859 OLFML2BQ68BL8 750 aa14.26□□□□□ -0.13
RNF4-216ENST00000511859 CATSPERGQ6ZRH7 1159 aa14.26□□□□□ -0.13
RNF4-216ENST00000511859 SH3RF1Q7Z6J0 888 aa14.26□□□□□ -0.13
RNF4-216ENST00000511859 DPP9Q86TI2 863 aa14.26□□□□□ -0.13
RNF4-216ENST00000511859 SPATA5Q8NB90 893 aa14.26□□□□□ -0.13
RNF4-216ENST00000511859 NPLOC4Q8TAT6 608 aa14.26□□□□□ -0.13
RNF4-216ENST00000511859 SH3RF3Q8TEJ3 882 aaPredicted RBP14.26□□□□□ -0.13
RNF4-216ENST00000511859 PA2G4Q9UQ80 394 aaKnown RBP14.26□□□□□ -0.13
RNF4-216ENST00000511859 STRNO43815 780 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 GDF11O95390 407 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 USP14P54578 494 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 PPP4CP60510 307 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 ATF7IPQ6VMQ6 1270 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 TBC1D9Q6ZT07 1266 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 USP38Q8NB14 1042 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 DNAJC18Q9H819 358 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 LRP2BPQ9P2M1 347 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 RAPGEFL1Q9UHV5 662 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 SIPA1L1O43166 1804 aa14.25□□□□□ -0.13
RNF4-216ENST00000511859 ADCYAP1R1P41586 468 aa14.24□□□□□ -0.13
RNF4-216ENST00000511859 TLE2Q04725 743 aa14.24□□□□□ -0.13
RNF4-216ENST00000511859 TGFBRAP1Q8WUH2 860 aa14.24□□□□□ -0.13
RNF4-216ENST00000511859 NEUROD6Q96NK8 337 aa14.24□□□□□ -0.13
RNF4-216ENST00000511859 ZNF576Q9H609 170 aa14.24□□□□□ -0.13
RNF4-216ENST00000511859 CLTBP09497 229 aa14.23□□□□□ -0.13
RNF4-216ENST00000511859 DNAJB2P25686 324 aa14.23□□□□□ -0.13
RNF4-216ENST00000511859 GORABQ5T7V8 394 aa14.23□□□□□ -0.13
RNF4-216ENST00000511859 SSH1Q8WYL5 1049 aa14.23□□□□□ -0.13
RNF4-216ENST00000511859 ASB2Q96Q27 587 aa14.23□□□□□ -0.13
RNF4-216ENST00000511859 GAS2L1Q99501 681 aaPredicted RBP14.23□□□□□ -0.13
RNF4-216ENST00000511859 MRS2Q9HD23 443 aa14.23□□□□□ -0.13
RNF4-216ENST00000511859 AATFQ9NY61 560 aaKnown RBP eCLIP14.23□□□□□ -0.13
RNF4-216ENST00000511859 SLC5A4Q9NY91 659 aa14.23□□□□□ -0.13
RNF4-216ENST00000511859 BTBD7Q9P203 1132 aa14.23□□□□□ -0.13
RNF4-216ENST00000511859 PALD1Q9ULE6 856 aa14.23□□□□□ -0.13
RNF4-216ENST00000511859 KIAA0355O15063 1070 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
RNF4-216ENST00000511859 HLA-DOAP06340 250 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 RAG1P15918 1043 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 ITGB8P26012 769 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 ARID4AP29374 1257 aaPredicted RBP14.22□□□□□ -0.13
RNF4-216ENST00000511859 TFCP2Q12800 502 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 LRRC41Q15345 812 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 SHROOM1Q2M3G4 852 aaPredicted RBP14.22□□□□□ -0.13
RNF4-216ENST00000511859 AKNAD1Q5T1N1 836 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 MAPKAPK5Q8IW41 473 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 FERMT2Q96AC1 680 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 FEZ1Q99689 392 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 KIAA1683Q9H0B3 1180 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 FLT1P17948 1338 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 CDK5RAP2Q96SN8 1893 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 ZNFX1Q9P2E3 1918 aaKnown RBP14.22□□□□□ -0.13
RNF4-216ENST00000511859 IGSF3O75054 1194 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 GH2P01242 217 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 ADORA2AP29274 412 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 EPHB4P54760 987 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 MRPS5P82675 430 aaKnown RBP14.22□□□□□ -0.13
RNF4-216ENST00000511859 FPGSQ05932 587 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 MAP3K12Q12852 859 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 ANO1Q5XXA6 986 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 NAA16Q6N069 864 aaPredicted RBP14.22□□□□□ -0.13
RNF4-216ENST00000511859 PI16Q6UXB8 463 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 TIFAQ96CG3 184 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 HOXC10Q9NYD6 342 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 THEGQ9P2T0 379 aa14.22□□□□□ -0.13
RNF4-216ENST00000511859 FOCADQ5VW36 1801 aa14.21□□□□□ -0.13
RNF4-216ENST00000511859 SPDYE16A6NNV3 312 aaPredicted RBP14.21□□□□□ -0.14
RNF4-216ENST00000511859 VCAM1P19320 739 aa14.21□□□□□ -0.14
RNF4-216ENST00000511859 HOXD11P31277 338 aaPredicted RBP14.21□□□□□ -0.14
RNF4-216ENST00000511859 ZYXQ15942 572 aaKnown RBP14.21□□□□□ -0.14
RNF4-216ENST00000511859 TATDN1Q6P1N9 297 aa14.21□□□□□ -0.14
RNF4-216ENST00000511859 ADAMTS19Q8TE59 1207 aa14.21□□□□□ -0.14
RNF4-216ENST00000511859 PHF24Q9UPV7 400 aa14.21□□□□□ -0.14
RNF4-216ENST00000511859 UQCRFS1P1P0C7P4 283 aa14.2□□□□□ -0.14
RNF4-216ENST00000511859 MCAMP43121 646 aa14.2□□□□□ -0.14
RNF4-216ENST00000511859 ALDH1L2Q3SY69 923 aa14.2□□□□□ -0.14
RNF4-216ENST00000511859 RNF180Q86T96 592 aa14.2□□□□□ -0.14
RNF4-216ENST00000511859 SHCBP1Q8NEM2 672 aa14.2□□□□□ -0.14
RNF4-216ENST00000511859 IL27Q8NEV9 243 aa14.2□□□□□ -0.14
RNF4-216ENST00000511859 PPM1EQ8WY54 764 aa14.2□□□□□ -0.14
RNF4-216ENST00000511859 UHRF1Q96T88 793 aaPredicted RBP14.2□□□□□ -0.14
RNF4-216ENST00000511859 C1QTNF1Q9BXJ1 281 aa14.2□□□□□ -0.14
RNF4-216ENST00000511859 TMEM39AQ9NV64 488 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms