RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 C9orf50Q5SZB4 431 aa16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 FOXP4Q8IVH2 680 aaPredicted RBP16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 TRPV1Q8NER1 839 aa16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 MYLIPQ8WY64 445 aa16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 CDCA7LQ96GN5 454 aa16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 GINM1Q9NU53 330 aa16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 IVNS1ABPQ9Y6Y0 642 aa16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 RLFQ13129 1914 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 MYO5AQ9Y4I1 1855 aaKnown RBP16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 SLC15A5A6NIM6 579 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 USP17L15C9J2P7 530 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 USP17L13C9JLJ4 530 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 USP17L11C9JVI0 530 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 USP17L18D6R9N7 530 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 USP17L22D6RA61 530 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 USP17L17D6RBQ6 530 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 USP17L19D6RCP7 530 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 USP17L20D6RJB6 530 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 UQCRFS1P1P0C7P4 283 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 PTPREP23469 700 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 USP17L24Q0WX57 530 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 NPLOC4Q8TAT6 608 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 PRDM6Q9NQX0 595 aa16.23■□□□□ 0.19
POLR2J3-216ENST00000511773 MYH1P12882 1939 aa16.22■□□□□ 0.19
POLR2J3-216ENST00000511773 FOSL2P15408 326 aa16.22■□□□□ 0.19
POLR2J3-216ENST00000511773 GRB14Q14449 540 aa16.22■□□□□ 0.19
POLR2J3-216ENST00000511773 RAB3GAP1Q15042 981 aa16.22■□□□□ 0.19
POLR2J3-216ENST00000511773 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
POLR2J3-216ENST00000511773 BADQ92934 168 aa16.22■□□□□ 0.19
POLR2J3-216ENST00000511773 BTBD7Q9P203 1132 aa16.22■□□□□ 0.19
POLR2J3-216ENST00000511773 KBTBD13C9JR72 458 aa16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 GNAI3P08754 354 aa16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 VCAM1P19320 739 aa16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 PPP4CP60510 307 aa16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 DYNLL1P63167 89 aaKnown RBP16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 MTX1Q13505 466 aa16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 TRIM60Q495X7 471 aa16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 TTC39AQ5SRH9 613 aa16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 ATF7IPQ6VMQ6 1270 aa16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 C12orf42Q96LP6 360 aa16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 TTYH1Q9H313 450 aaPredicted RBP16.21■□□□□ 0.19
POLR2J3-216ENST00000511773 HOXC6P09630 235 aa16.2■□□□□ 0.18
POLR2J3-216ENST00000511773 CYBAP13498 195 aa16.2■□□□□ 0.18
POLR2J3-216ENST00000511773 G3BP1Q13283 466 aaKnown RBP eCLIP16.2■□□□□ 0.18
POLR2J3-216ENST00000511773 SLC39A5Q6ZMH5 540 aa16.2■□□□□ 0.18
POLR2J3-216ENST00000511773 CATSPERGQ6ZRH7 1159 aa16.2■□□□□ 0.18
POLR2J3-216ENST00000511773 ARRDC4Q8NCT1 418 aa16.2■□□□□ 0.18
POLR2J3-216ENST00000511773 ACER1Q8TDN7 264 aa16.2■□□□□ 0.18
POLR2J3-216ENST00000511773 RPAP3Q9H6T3 665 aaPredicted RBP16.2■□□□□ 0.18
POLR2J3-216ENST00000511773 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
POLR2J3-216ENST00000511773 SH3RF1Q7Z6J0 888 aa16.19■□□□□ 0.18
POLR2J3-216ENST00000511773 DPP9Q86TI2 863 aa16.19■□□□□ 0.18
POLR2J3-216ENST00000511773 FERMT2Q96AC1 680 aa16.19■□□□□ 0.18
POLR2J3-216ENST00000511773 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
POLR2J3-216ENST00000511773 PNMA6EA0A0J9YXQ4 647 aa16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 SPDYE16A6NNV3 312 aaPredicted RBP16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 ADORA2AP29274 412 aa16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 USP5P45974 858 aa16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 USP14P54578 494 aa16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 SMAD3P84022 425 aaKnown RBP16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 MIGA1Q8NAN2 632 aa16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 DBNDD2Q9BQY9 259 aa16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 KIAA1683Q9H0B3 1180 aa16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 PIH1D3Q9NQM4 214 aaKnown RBP16.18■□□□□ 0.18
POLR2J3-216ENST00000511773 ZNF236Q9UL36 1845 aa16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 TRIM43BA6NCK2 446 aa16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 CYP7A1P22680 504 aa16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 ADCYAP1R1P41586 468 aa16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 ABCB5Q2M3G0 1257 aa16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 CERKLQ49MI3 558 aaPredicted RBP16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 CCDC158Q5M9N0 1113 aa16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 TATDN1Q6P1N9 297 aa16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 TRIM43Q96BQ3 446 aaPredicted RBP16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 SERPINB13Q9UIV8 391 aa16.17■□□□□ 0.18
POLR2J3-216ENST00000511773 GNAI2P04899 355 aa16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 ZAP70P43403 619 aa16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 OS9Q13438 667 aaPredicted RBP16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 SNX17Q15036 470 aa16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 TNNI3KQ59H18 835 aa16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 PRAMEF19Q5SWL8 479 aa16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 LBX2Q6XYB7 198 aa16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 RNPC3Q96LT9 517 aaKnown RBP16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 FPGT-TNNI3KV9GXZ4 949 aa16.16■□□□□ 0.18
POLR2J3-216ENST00000511773 SEPT4O43236 478 aa16.15■□□□□ 0.18
POLR2J3-216ENST00000511773 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
POLR2J3-216ENST00000511773 OLFML2BQ68BL8 750 aa16.15■□□□□ 0.18
POLR2J3-216ENST00000511773 SYMPKQ92797 1274 aaKnown RBP16.15■□□□□ 0.18
POLR2J3-216ENST00000511773 MOV10L1Q9BXT6 1211 aaKnown RBP16.15■□□□□ 0.18
POLR2J3-216ENST00000511773 CABP5Q9NP86 173 aa16.15■□□□□ 0.18
POLR2J3-216ENST00000511773 IGHA2P01877 340 aa16.14■□□□□ 0.17
POLR2J3-216ENST00000511773 TLE2Q04725 743 aa16.14■□□□□ 0.17
POLR2J3-216ENST00000511773 PLS1Q14651 629 aa16.14■□□□□ 0.17
POLR2J3-216ENST00000511773 LRRC41Q15345 812 aa16.14■□□□□ 0.17
POLR2J3-216ENST00000511773 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
POLR2J3-216ENST00000511773 EHD4Q9H223 541 aa16.14■□□□□ 0.17
POLR2J3-216ENST00000511773 COBLO75128 1261 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms