RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 EFCC1Q9HA90 598 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 KIF3AQ9Y496 699 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 FOCADQ5VW36 1801 aa10.69□□□□□ -0.7
NR1I3-228ENST00000511676 FLT1P17948 1338 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 USP17L21D6R901 530 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 PFKFB2O60825 505 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 PDCP20941 246 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 CRKP46108 304 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 ANTXR2P58335 489 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 CFAP100Q494V2 611 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 FKBP1CQ5VVH2 108 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 DCAF15Q66K64 600 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 CLEC17AQ6ZS10 378 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 Q6ZUG5 572 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 SH3RF3Q8TEJ3 882 aaPredicted RBP10.68□□□□□ -0.7
NR1I3-228ENST00000511676 BRF1Q92994 677 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 GTF3C6Q969F1 213 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 VEZTQ9HBM0 779 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 MCM9Q9NXL9 1143 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 TPCN1Q9ULQ1 816 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 JAG2Q9Y219 1238 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 TRIM17Q9Y577 477 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
NR1I3-228ENST00000511676 PDE4DIPQ5VU43 2346 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 NEDD4P46934 1319 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 ERICH2A1L162 156 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 SH2B2O14492 632 aaPredicted RBP10.67□□□□□ -0.7
NR1I3-228ENST00000511676 CPA1P15085 419 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 HMGN5P82970 282 aaKnown RBP10.67□□□□□ -0.7
NR1I3-228ENST00000511676 ME3Q16798 604 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 PPP4R3BQ5MIZ7 849 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
NR1I3-228ENST00000511676 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 IQCA1Q86XH1 822 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 PLCD3Q8N3E9 789 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 ZBED3Q96IU2 234 aaPredicted RBP10.67□□□□□ -0.7
NR1I3-228ENST00000511676 EHD4Q9H223 541 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 DHX36Q9H2U1 1008 aaKnown RBP10.67□□□□□ -0.7
NR1I3-228ENST00000511676 TCP11L1Q9NUJ3 509 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 SWAP70Q9UH65 585 aa10.67□□□□□ -0.7
NR1I3-228ENST00000511676 SCN9AQ15858 1988 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 ATRNL1Q5VV63 1379 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 PLIN4Q96Q06 1357 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 TESPA1A2RU30 521 aaPredicted RBP10.66□□□□□ -0.7
NR1I3-228ENST00000511676 KDM4AO75164 1064 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 ENTPD3O75355 529 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 CETPP11597 493 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 MAP3K9P80192 1104 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 RAB3GAP1Q15042 981 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 C16orf86Q6ZW13 317 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 IGDCC4Q8TDY8 1250 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 WNK4Q96J92 1243 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 UBAC1Q9BSL1 405 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 SLKQ9H2G2 1235 aaPredicted RBP10.66□□□□□ -0.7
NR1I3-228ENST00000511676 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
NR1I3-228ENST00000511676 CCDC196A0A1B0GTZ2 297 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 B4E1Z4 1266 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 CDKL5O76039 1030 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 CALM1P0DP23 149 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 CALM2P0DP24 149 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 CALM3P0DP25 149 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 PTMSP20962 102 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
NR1I3-228ENST00000511676 CTDSPL2Q05D32 466 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 PRKG1Q13976 671 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 RASA3Q14644 834 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 CDC42EP5Q6NZY7 148 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 CPLX2Q6PUV4 134 aaKnown RBP10.65□□□□□ -0.7
NR1I3-228ENST00000511676 APOA5Q6Q788 366 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 MAP3K14Q99558 947 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 LY9Q9HBG7 655 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 PTPN22Q9Y2R2 807 aa10.65□□□□□ -0.7
NR1I3-228ENST00000511676 ASTN2O75129 1339 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-228ENST00000511676 CDK5RAP2Q96SN8 1893 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 IFIT3O14879 490 aaKnown RBP10.64□□□□□ -0.71
NR1I3-228ENST00000511676 LARGE1O95461 756 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 GABPAQ06546 454 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 WTAPQ15007 396 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 SEC23AQ15436 765 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 SLC9C1Q4G0N8 1177 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 PRAMEF18Q5VWM3 479 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 SYNE3Q6ZMZ3 975 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 CYB5R4Q7L1T6 521 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 OTOP1Q7RTM1 612 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 FAM83AQ86UY5 434 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 METTL16Q86W50 562 aaKnown RBP10.64□□□□□ -0.71
NR1I3-228ENST00000511676 DGKHQ86XP1 1220 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 CCDC83Q8IWF9 413 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 SMARCC2Q8TAQ2 1214 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 ANKS1AQ92625 1134 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-228ENST00000511676 USP40Q9NVE5 1235 aa10.64□□□□□ -0.71
NR1I3-228ENST00000511676 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms