RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 XBP1P17861 261 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 IGFBP4P22692 258 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 SSTR3P32745 418 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 CPT1AP50416 773 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 FPGSQ05932 587 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 PDE4DQ08499 809 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 PPP2R5DQ14738 602 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 RNF20Q5VTR2 975 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 SMIM5Q71RC9 77 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 SLC44A5Q8NCS7 719 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 GIMAP8Q8ND71 665 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 NAPBQ9H115 298 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 C1orf115Q9H7X2 142 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 THEGQ9P2T0 379 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 PAPPA2Q9BXP8 1791 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 SHANK3Q9BYB0 1731 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 TESPA1A2RU30 521 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 HOXA2O43364 376 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 CSF1RP07333 972 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 VGLL4Q14135 290 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 TIGD5Q53EQ6 642 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 NBPF12Q5TAG4 269 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 EP400NLQ6ZTU2 488 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 NLRX1Q86UT6 975 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 TEX2Q8IWB9 1127 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 CCDC12Q8WUD4 166 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 MCM9Q9NXL9 1143 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 ZNF215Q9UL58 517 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-209ENST00000511124 STXBP5LQ9Y2K9 1186 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 SLC4A7Q9Y6M7 1214 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 ARFGEF1Q9Y6D6 1849 aa3.35□□□□□ -1.87
CLOCK-209ENST00000511124 SALL1Q9NSC2 1324 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 PER1O15534 1290 aaPredicted RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 FGBP02675 491 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 KIF5BP33176 963 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 BMP8BP34820 402 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 RARSP54136 660 aaKnown RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 MRPS5P82675 430 aaKnown RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 ICA1Q05084 483 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 CST9Q5W186 159 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 DEFB123Q8N688 67 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 SPATA5Q8NB90 893 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 UBE2Q2Q8WVN8 375 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 HERVK_113Q902F9 699 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 BORCS6Q96GS4 357 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 MFSD14AQ96MC6 490 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 UBAC1Q9BSL1 405 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 IDI2Q9BXS1 227 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 PLSCR2Q9NRY7 297 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 DIAPH3Q9NSV4 1193 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 ORC3Q9UBD5 711 aaPredicted RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 SEC63Q9UGP8 760 aaKnown RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 FEM1BQ9UK73 627 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 JAG2Q9Y219 1238 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 MRPL11Q9Y3B7 192 aaKnown RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 UTYO14607 1347 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 BTBD19C9JJ37 291 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 NOP56O00567 594 aaKnown RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 TSPY3P0CV98 308 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 TSPY8P0CW00 308 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 CASTP20810 708 aaKnown RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 BACE1P56817 501 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 CDC42EP1Q00587 391 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 PTPN11Q06124 597 aaPredicted RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 NOLC1Q14978 699 aaKnown RBP eCLIP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 SPOUT1Q5T280 376 aaKnown RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 FBXO33Q7Z6M2 555 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 FAM163AQ96GL9 167 aaPredicted RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 ZNF333Q96JL9 665 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 SCLT1Q96NL6 688 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 JPH2Q9BR39 696 aaPredicted RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 KCNH6Q9H252 994 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 RWDD1Q9H446 243 aaPredicted RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 DDX20Q9UHI6 824 aaKnown RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 RAB23Q9ULC3 237 aa3.34□□□□□ -1.87
CLOCK-209ENST00000511124 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.34□□□□□ -1.87
CLOCK-209ENST00000511124 ZBED9Q6R2W3 1325 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 MAP2P11137 1827 aaKnown RBP3.34□□□□□ -1.88
CLOCK-209ENST00000511124 A0A1B0GUL7 405 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 DNM1LO00429 736 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 TAF5LO75529 589 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 AMHP03971 560 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 PRKAR2AP13861 404 aaKnown RBP3.34□□□□□ -1.88
CLOCK-209ENST00000511124 STAT3P40763 770 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 GYG1P46976 350 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 SMAD3P84022 425 aaKnown RBP3.34□□□□□ -1.88
CLOCK-209ENST00000511124 E2F5Q15329 346 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 TJAP1Q5JTD0 557 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 ANKRD13CQ8N6S4 541 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.34□□□□□ -1.88
CLOCK-209ENST00000511124 TEX13BQ9BXU2 312 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 ARHGAP39Q9C0H5 1083 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 SENP6Q9GZR1 1112 aaPredicted RBP3.34□□□□□ -1.88
CLOCK-209ENST00000511124 KCNG1Q9UIX4 513 aa3.34□□□□□ -1.88
CLOCK-209ENST00000511124 ARHGEF37A1IGU5 675 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 TSPY2A6NKD2 308 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 USP2O75604 605 aaPredicted RBP3.33□□□□□ -1.88
CLOCK-209ENST00000511124 KIF4AO95239 1232 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 HERVK_113P62684 666 aa3.33□□□□□ -1.88
CLOCK-209ENST00000511124 TTLL4Q14679 1199 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms