RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 TBX22Q9Y458 520 aa8.36□□□□□ -1.07
CHD1-206ENST00000511067 PDPK1O15530 556 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 GJB6O95452 261 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 RAB6AP20340 208 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 DOC2BQ14184 412 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 ZYXQ15942 572 aaKnown RBP8.35□□□□□ -1.07
CHD1-206ENST00000511067 BBS9Q3SYG4 887 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 ARMCX6Q7L4S7 300 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 FAM178BQ8IXR5 827 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 ZNF669Q96BR6 464 aaPredicted RBP8.35□□□□□ -1.07
CHD1-206ENST00000511067 MYRFLQ96LU7 910 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 UBL7Q96S82 380 aaPredicted RBP8.35□□□□□ -1.07
CHD1-206ENST00000511067 SEMA6CQ9H3T2 930 aa8.35□□□□□ -1.07
CHD1-206ENST00000511067 LTBP3Q9NS15 1303 aa8.34□□□□□ -1.07
CHD1-206ENST00000511067 DDAH1O94760 285 aa8.34□□□□□ -1.07
CHD1-206ENST00000511067 MAP7Q14244 749 aa8.34□□□□□ -1.07
CHD1-206ENST00000511067 VHLLQ6RSH7 139 aa8.34□□□□□ -1.07
CHD1-206ENST00000511067 FAM177A1Q8N128 213 aaPredicted RBP8.34□□□□□ -1.07
CHD1-206ENST00000511067 MICAL1Q8TDZ2 1067 aa8.34□□□□□ -1.07
CHD1-206ENST00000511067 KIF2CQ99661 725 aa8.34□□□□□ -1.07
CHD1-206ENST00000511067 DPH2Q9BQC3 489 aaPredicted RBP8.34□□□□□ -1.07
CHD1-206ENST00000511067 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.34□□□□□ -1.07
CHD1-206ENST00000511067 ST7Q9NRC1 585 aa8.34□□□□□ -1.07
CHD1-206ENST00000511067 ZNF214Q9UL59 606 aaPredicted RBP8.34□□□□□ -1.07
CHD1-206ENST00000511067 UBOX5O94941 541 aa8.33□□□□□ -1.08
CHD1-206ENST00000511067 POLR2BP30876 1174 aaKnown RBP8.33□□□□□ -1.08
CHD1-206ENST00000511067 GBP1P32455 592 aa8.33□□□□□ -1.08
CHD1-206ENST00000511067 IFRD2Q12894 506 aaPredicted RBP8.33□□□□□ -1.08
CHD1-206ENST00000511067 CDPF1Q6NVV7 123 aa8.33□□□□□ -1.08
CHD1-206ENST00000511067 C6orf15Q6UXA7 325 aaPredicted RBP8.33□□□□□ -1.08
CHD1-206ENST00000511067 ST13P5Q8NFI4 369 aaPredicted RBP8.33□□□□□ -1.08
CHD1-206ENST00000511067 SMARCC1Q92922 1105 aaPredicted RBP8.33□□□□□ -1.08
CHD1-206ENST00000511067 UTP4Q969X6 686 aaKnown RBP8.33□□□□□ -1.08
CHD1-206ENST00000511067 DAGLAQ9Y4D2 1042 aa8.33□□□□□ -1.08
CHD1-206ENST00000511067 FAM221BA6H8Z2 402 aa8.32□□□□□ -1.08
CHD1-206ENST00000511067 PMS1P54277 932 aaKnown RBP8.32□□□□□ -1.08
CHD1-206ENST00000511067 SLC7A5Q01650 507 aa8.32□□□□□ -1.08
CHD1-206ENST00000511067 SGO2Q562F6 1265 aa8.32□□□□□ -1.08
CHD1-206ENST00000511067 JAZF1Q86VZ6 243 aa8.32□□□□□ -1.08
CHD1-206ENST00000511067 FBLIM1Q8WUP2 373 aa8.32□□□□□ -1.08
CHD1-206ENST00000511067 MEGF10Q96KG7 1140 aa8.32□□□□□ -1.08
CHD1-206ENST00000511067 SUCOQ9UBS9 1254 aaKnown RBP8.32□□□□□ -1.08
CHD1-206ENST00000511067 CCDC85CA6NKD9 419 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 B2RBV5 119 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 CLEC3AO75596 197 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 NFICP08651 508 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 MAP4P27816 1152 aaKnown RBP8.31□□□□□ -1.08
CHD1-206ENST00000511067 ZNF143P52747 638 aaPredicted RBP8.31□□□□□ -1.08
CHD1-206ENST00000511067 SDE2Q6IQ49 451 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 EEPD1Q7L9B9 569 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 FAM20CQ8IXL6 584 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 ARMC10Q8N2F6 343 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 SLC6A18Q96N87 628 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 PSMG3-AS1Q96PY0 264 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 EPN3Q9H201 632 aa8.31□□□□□ -1.08
CHD1-206ENST00000511067 BMP3P12645 472 aa8.3□□□□□ -1.08
CHD1-206ENST00000511067 MRM1Q6IN84 353 aaKnown RBP8.3□□□□□ -1.08
CHD1-206ENST00000511067 SEZ6L2Q6UXD5 910 aa8.3□□□□□ -1.08
CHD1-206ENST00000511067 TMEM192Q8IY95 271 aa8.3□□□□□ -1.08
CHD1-206ENST00000511067 DNAJB8Q8NHS0 232 aa8.3□□□□□ -1.08
CHD1-206ENST00000511067 BAHD1Q8TBE0 780 aaPredicted RBP8.3□□□□□ -1.08
CHD1-206ENST00000511067 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
CHD1-206ENST00000511067 KLHL6Q8WZ60 621 aa8.3□□□□□ -1.08
CHD1-206ENST00000511067 SEMA6BQ9H3T3 888 aa8.3□□□□□ -1.08
CHD1-206ENST00000511067 NAT2P11245 290 aa8.29□□□□□ -1.08
CHD1-206ENST00000511067 ETV3P41162 512 aa8.29□□□□□ -1.08
CHD1-206ENST00000511067 RNF4P78317 190 aa8.29□□□□□ -1.08
CHD1-206ENST00000511067 GNPTABQ3T906 1256 aa8.29□□□□□ -1.08
CHD1-206ENST00000511067 MTERF2Q49AM1 385 aa8.29□□□□□ -1.08
CHD1-206ENST00000511067 KIAA1211LQ6NV74 962 aa8.29□□□□□ -1.08
CHD1-206ENST00000511067 LETMD1Q6P1Q0 360 aa8.29□□□□□ -1.08
CHD1-206ENST00000511067 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
CHD1-206ENST00000511067 CEP131Q9UPN4 1083 aa8.29□□□□□ -1.08
CHD1-206ENST00000511067 FAM95CA0A1B0GW59 222 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 FAM86C2PA6NEL3 165 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 DHX15O43143 795 aaKnown RBP8.28□□□□□ -1.08
CHD1-206ENST00000511067 RXRBP28702 533 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 CHMP4BP1P59074 171 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 PAOXQ6QHF9 649 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 NLGN1Q8N2Q7 840 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 GIMAP7Q8NHV1 300 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 XAGE3Q8WTP9 111 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 DNAJC7Q99615 494 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 MIPEPQ99797 713 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 PRDM10Q9NQV6 1147 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 PCDHB10Q9UN67 800 aa8.28□□□□□ -1.08
CHD1-206ENST00000511067 MRPL42Q9Y6G3 142 aaKnown RBP8.28□□□□□ -1.08
CHD1-206ENST00000511067 ENPP3O14638 875 aa8.27□□□□□ -1.09
CHD1-206ENST00000511067 SUSD5O60279 629 aa8.27□□□□□ -1.09
CHD1-206ENST00000511067 PPFIBP1Q86W92 1011 aa8.27□□□□□ -1.09
CHD1-206ENST00000511067 COX4I2Q96KJ9 171 aa8.27□□□□□ -1.09
CHD1-206ENST00000511067 RNPC3Q96LT9 517 aaKnown RBP8.27□□□□□ -1.09
CHD1-206ENST00000511067 ASPNQ9BXN1 380 aa8.27□□□□□ -1.09
CHD1-206ENST00000511067 TPSG1Q9NRR2 321 aa8.27□□□□□ -1.09
CHD1-206ENST00000511067 COL17A1Q9UMD9 1497 aaPredicted RBP8.26□□□□□ -1.09
CHD1-206ENST00000511067 DYNC1LI2O43237 492 aaPredicted RBP8.26□□□□□ -1.09
CHD1-206ENST00000511067 SLITRK5O94991 958 aa8.26□□□□□ -1.09
CHD1-206ENST00000511067 CLEC10AQ8IUN9 316 aa8.26□□□□□ -1.09
CHD1-206ENST00000511067 JMYQ8N9B5 988 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms