RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RAD50Q92878 1312 aa18.56■□□□□ 0.56
SH3TC1-220ENST00000511002 CDC45O75419 566 aa18.56■□□□□ 0.56
SH3TC1-220ENST00000511002 CERKLQ49MI3 558 aaPredicted RBP18.56■□□□□ 0.56
SH3TC1-220ENST00000511002 TRIM47Q96LD4 638 aa18.56■□□□□ 0.56
SH3TC1-220ENST00000511002 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
SH3TC1-220ENST00000511002 USP17L21D6R901 530 aa18.55■□□□□ 0.56
SH3TC1-220ENST00000511002 APPP05067 770 aa18.55■□□□□ 0.56
SH3TC1-220ENST00000511002 ABCB5Q2M3G0 1257 aa18.55■□□□□ 0.56
SH3TC1-220ENST00000511002 ACER1Q8TDN7 264 aa18.55■□□□□ 0.56
SH3TC1-220ENST00000511002 EMILIN3Q9NT22 766 aa18.55■□□□□ 0.56
SH3TC1-220ENST00000511002 GINM1Q9NU53 330 aa18.55■□□□□ 0.56
SH3TC1-220ENST00000511002 DOCK3Q8IZD9 2030 aa18.55■□□□□ 0.56
SH3TC1-220ENST00000511002 PATL2C9JE40 543 aaKnown RBP18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 USP17L10C9JJH3 530 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 PEX10O60683 326 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 PSMC4P43686 418 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 TDO2P48775 406 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 SEPT2Q15019 361 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 ZYXQ15942 572 aaKnown RBP18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 C12orf60Q5U649 245 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 CLEC10AQ8IUN9 316 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 IFNL3Q8IZI9 196 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 RUFY2Q8WXA3 655 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 DDRGK1Q96HY6 314 aa18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 ASCC2Q9H1I8 757 aaPredicted RBP18.54■□□□□ 0.56
SH3TC1-220ENST00000511002 SGSM2O43147 1006 aa18.53■□□□□ 0.56
SH3TC1-220ENST00000511002 HSPD1P10809 573 aaKnown RBP18.53■□□□□ 0.56
SH3TC1-220ENST00000511002 OSBPP22059 807 aa18.53■□□□□ 0.56
SH3TC1-220ENST00000511002 RGS19P49795 217 aa18.53■□□□□ 0.56
SH3TC1-220ENST00000511002 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
SH3TC1-220ENST00000511002 GIMAP6Q6P9H5 292 aa18.53■□□□□ 0.56
SH3TC1-220ENST00000511002 SMCR8Q8TEV9 937 aaPredicted RBP18.53■□□□□ 0.56
SH3TC1-220ENST00000511002 ESYT1Q9BSJ8 1104 aa18.53■□□□□ 0.56
SH3TC1-220ENST00000511002 CENPFP49454 3210 aa18.52■□□□□ 0.56
SH3TC1-220ENST00000511002 AKR1B1P15121 316 aa18.52■□□□□ 0.56
SH3TC1-220ENST00000511002 KIF22Q14807 665 aa18.52■□□□□ 0.56
SH3TC1-220ENST00000511002 ANKRD13CQ8N6S4 541 aa18.52■□□□□ 0.56
SH3TC1-220ENST00000511002 NACAP1Q9BZK3 213 aa18.52■□□□□ 0.56
SH3TC1-220ENST00000511002 NAPBQ9H115 298 aa18.52■□□□□ 0.56
SH3TC1-220ENST00000511002 TMOD4Q9NZQ9 345 aa18.52■□□□□ 0.56
SH3TC1-220ENST00000511002 ARPP21Q9UBL0 812 aaPredicted RBP18.52■□□□□ 0.56
SH3TC1-220ENST00000511002 A0A1W2PRG0 241 aa18.51■□□□□ 0.55
SH3TC1-220ENST00000511002 C19orf81C9J6K1 198 aa18.51■□□□□ 0.55
SH3TC1-220ENST00000511002 MPHOSPH10O00566 681 aaKnown RBP18.51■□□□□ 0.55
SH3TC1-220ENST00000511002 FMNL1O95466 1100 aaPredicted RBP18.51■□□□□ 0.55
SH3TC1-220ENST00000511002 CDK8P49336 464 aa18.51■□□□□ 0.55
SH3TC1-220ENST00000511002 POTEEQ6S8J3 1075 aa18.51■□□□□ 0.55
SH3TC1-220ENST00000511002 STK11IPQ8N1F8 1099 aa18.51■□□□□ 0.55
SH3TC1-220ENST00000511002 CABP5Q9NP86 173 aa18.51■□□□□ 0.55
SH3TC1-220ENST00000511002 KIAA0100Q14667 2235 aaKnown RBP18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 MINDY4BA8MYZ0 360 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 HOXA7P31268 230 aaPredicted RBP18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 SBK1Q52WX2 424 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 USP17L2Q6R6M4 530 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 CASC1Q6TDU7 716 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 C16orf86Q6ZW13 317 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 SH3TC2Q8TF17 1288 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 ARMC5Q96C12 935 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 P2RX7Q99572 595 aaKnown RBP18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 FEZ1Q99689 392 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 SRRDQ9UH36 339 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 SWAP70Q9UH65 585 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 PNMA3Q9UL41 463 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 GABRQQ9UN88 632 aa18.5■□□□□ 0.55
SH3TC1-220ENST00000511002 POTEFA5A3E0 1075 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 FGAP02671 866 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 PTH1RQ03431 593 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 PRKCZQ05513 592 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 ARHGEF6Q15052 776 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 ALX1Q15699 326 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 SIAH1Q8IUQ4 282 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 AMOTL1Q8IY63 956 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 C12orf42Q96LP6 360 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 DSCC1Q9BVC3 393 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 KIAA1683Q9H0B3 1180 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 TXNRD2Q9NNW7 524 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 ROBO3Q96MS0 1386 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 ZMYM6O95789 1325 aa18.49■□□□□ 0.55
SH3TC1-220ENST00000511002 FCGRTP55899 365 aa18.48■□□□□ 0.55
SH3TC1-220ENST00000511002 IRX3P78415 501 aaPredicted RBP18.48■□□□□ 0.55
SH3TC1-220ENST00000511002 PABPC4Q13310 644 aaKnown RBP eCLIP18.48■□□□□ 0.55
SH3TC1-220ENST00000511002 FAM110CQ1W6H9 321 aa18.48■□□□□ 0.55
SH3TC1-220ENST00000511002 KIAA1755Q5JYT7 1200 aa18.48■□□□□ 0.55
SH3TC1-220ENST00000511002 GREB1LQ9C091 1923 aaPredicted RBP18.48■□□□□ 0.55
SH3TC1-220ENST00000511002 MYPNQ86TC9 1320 aa18.48■□□□□ 0.55
SH3TC1-220ENST00000511002 MYCP01106 439 aaPredicted RBP18.47■□□□□ 0.55
SH3TC1-220ENST00000511002 VCAM1P19320 739 aa18.47■□□□□ 0.55
SH3TC1-220ENST00000511002 HERVK_113P62684 666 aa18.47■□□□□ 0.55
SH3TC1-220ENST00000511002 PPARAQ07869 468 aa18.47■□□□□ 0.55
SH3TC1-220ENST00000511002 SLC9C1Q4G0N8 1177 aa18.47■□□□□ 0.55
SH3TC1-220ENST00000511002 TMEM179Q6ZVK1 233 aa18.47■□□□□ 0.55
SH3TC1-220ENST00000511002 ZNF333Q96JL9 665 aa18.47■□□□□ 0.55
SH3TC1-220ENST00000511002 GNRH1P01148 92 aa18.46■□□□□ 0.55
SH3TC1-220ENST00000511002 GCLCP48506 637 aaPredicted RBP18.46■□□□□ 0.55
SH3TC1-220ENST00000511002 CTDSPL2Q05D32 466 aa18.46■□□□□ 0.55
SH3TC1-220ENST00000511002 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.46■□□□□ 0.55
SH3TC1-220ENST00000511002 LSG1Q9H089 658 aaKnown RBP18.46■□□□□ 0.55
SH3TC1-220ENST00000511002 ANO2Q9NQ90 1003 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms