RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MRC2Q9UBG0 1479 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 DUOX2Q9NRD8 1548 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 DKC1O60832 514 aaKnown RBP eCLIP9.24□□□□□ -0.93
HTT-208ENST00000510626 EMBQ6PCB8 327 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 CCDC25Q86WR0 208 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 VIPAS39Q9H9C1 493 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 ANKRD13DQ6ZTN6 518 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 TOM1L2Q6ZVM7 507 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 PPCSQ9HAB8 311 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 TMOD4Q9NZQ9 345 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 KIRREL3Q8IZU9 778 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 CREB3O43889 395 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 TMCO5AQ8N6Q1 288 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 AMOTL2Q9Y2J4 779 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 PPP2R2CQ9Y2T4 447 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 CMA1P23946 247 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 TDRD7Q8NHU6 1098 aaKnown RBP9.24□□□□□ -0.93
HTT-208ENST00000510626 TRAF5O00463 557 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 KRT9P35527 623 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 DNM2P50570 870 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 MRPS9P82933 396 aaKnown RBP9.23□□□□□ -0.93
HTT-208ENST00000510626 NECAB1Q8N987 351 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 KDM3AQ9Y4C1 1321 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 PI4KAP2A4QPH2 592 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 TMEM232C9JQI7 657 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 RASIP1Q5U651 963 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 PI4KAP1Q8N8J0 262 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 KIFC2Q96AC6 838 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 KIAA1468Q9P260 1216 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 ZSCAN29Q8IWY8 852 aaPredicted RBP9.23□□□□□ -0.93
HTT-208ENST00000510626 NT5C3AQ9H0P0 336 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 DISP3Q9P2K9 1392 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 FAM204AQ9H8W3 233 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 KIF11P52732 1056 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 CSGALNACT2Q8N6G5 542 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 FAM81BQ96LP2 452 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 RNF216Q9NWF9 866 aaPredicted RBP9.23□□□□□ -0.93
HTT-208ENST00000510626 EPSTI1Q96J88 318 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 AMFRQ9UKV5 643 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 CLASP1Q7Z460 1538 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 PSD3Q9NYI0 1048 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 RGS12O14924 1447 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 TRAPPC8Q9Y2L5 1435 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 TLDC2A0PJX2 215 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 KRT25Q7Z3Z0 450 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 BCAS4Q8TDM0 211 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 SAMM50Q9Y512 469 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 SPDYE3A6NKU9 549 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 OPHN1O60890 802 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 CCDC105Q8IYK2 499 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 PANX2Q96RD6 677 aa9.23□□□□□ -0.93
HTT-208ENST00000510626 CHUKO15111 745 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 DSCC1Q9BVC3 393 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 PASKQ96RG2 1323 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 CDAN1Q8IWY9 1227 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 H0YCG3 227 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 CCDC124Q96CT7 223 aaKnown RBP9.22□□□□□ -0.93
HTT-208ENST00000510626 FAM129AQ9BZQ8 928 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 TRAPPC10P48553 1259 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 UBE3BQ7Z3V4 1068 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 TMEM87AQ8NBN3 555 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 TRMT112Q9UI30 125 aaKnown RBP9.22□□□□□ -0.93
HTT-208ENST00000510626 SMIM23A6NLE4 172 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 RGS22Q8NE09 1264 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 NLRP7Q8WX94 980 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 RASGRF2O14827 1237 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 HEATR3Q7Z4Q2 680 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 SRRM1Q8IYB3 904 aaKnown RBP9.22□□□□□ -0.93
HTT-208ENST00000510626 PAIP2BQ9ULR5 123 aaKnown RBP9.22□□□□□ -0.93
HTT-208ENST00000510626 SCINQ9Y6U3 715 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 ABCA5Q8WWZ7 1642 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 ASPHQ12797 758 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 TERF2Q15554 542 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 PDE11AQ9HCR9 933 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 RIC8AQ9NPQ8 531 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 NOP53Q9NZM5 478 aaKnown RBP9.22□□□□□ -0.93
HTT-208ENST00000510626 ARHGAP10A1A4S6 786 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 LAD1O00515 517 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 SGSM2O43147 1006 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 TTI1O43156 1089 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 RPGRQ92834 1020 aaKnown RBP9.22□□□□□ -0.93
HTT-208ENST00000510626 KRT3P12035 628 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 RAPGEF1Q13905 1077 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 SDCCAG3Q96C92 435 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 KIFC3Q9BVG8 833 aa9.22□□□□□ -0.93
HTT-208ENST00000510626 YEATS2Q9ULM3 1422 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 CFAP73A6NFT4 308 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 ZNF804AQ7Z570 1209 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 NOC2LQ9Y3T9 749 aaKnown RBP9.21□□□□□ -0.93
HTT-208ENST00000510626 CATSPER1Q8NEC5 780 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 GSDMBQ8TAX9 411 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 AGTPBP1Q9UPW5 1226 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 OGFOD1Q8N543 542 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 NELFBQ8WX92 580 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 PRDM11Q9NQV5 511 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 TEKT1Q969V4 418 aa9.21□□□□□ -0.93
HTT-208ENST00000510626 AFAP1Q8N556 730 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 PRPF38AQ8NAV1 312 aaKnown RBP9.21□□□□□ -0.94
HTT-208ENST00000510626 ARMC2Q8NEN0 867 aa9.21□□□□□ -0.94
HTT-208ENST00000510626 KIAA0232Q92628 1395 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms