RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.25□□□□□ -0.45
SCARB2-204ENST00000509994 ARMT1Q9H993 441 aa12.25□□□□□ -0.45
SCARB2-204ENST00000509994 NR2E3Q9Y5X4 410 aa12.25□□□□□ -0.45
SCARB2-204ENST00000509994 USP17L15C9J2P7 530 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 USP17L13C9JLJ4 530 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 USP17L11C9JVI0 530 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 USP17L18D6R9N7 530 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 USP17L22D6RA61 530 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 USP17L17D6RBQ6 530 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 USP17L19D6RCP7 530 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 USP17L20D6RJB6 530 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 MBD4O95243 580 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 ZKSCAN1P17029 563 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-204ENST00000509994 MAPK4P31152 587 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 PLCD1P51178 756 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 ERVK-9P63128 1117 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 ERVK-24P63145 666 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 CCNA1P78396 465 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 USP17L24Q0WX57 530 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 TATDN1Q6P1N9 297 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 CHRDL2Q6WN34 429 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 SIRT2Q8IXJ6 389 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 LCORLQ8N3X6 602 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.24□□□□□ -0.45
SCARB2-204ENST00000509994 SOCS4Q8WXH5 440 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 LRRCC1Q9C099 1032 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 TANGO6Q9C0B7 1094 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 TXNRD2Q9NNW7 524 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 HMX1Q9NP08 348 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-204ENST00000509994 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 MORF4L1Q9UBU8 362 aa12.24□□□□□ -0.45
SCARB2-204ENST00000509994 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-204ENST00000509994 SMARCA5O60264 1052 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-204ENST00000509994 EVI5O60447 810 aa12.23□□□□□ -0.45
SCARB2-204ENST00000509994 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
SCARB2-204ENST00000509994 SHMT1P34896 483 aa12.23□□□□□ -0.45
SCARB2-204ENST00000509994 SEPT2Q15019 361 aa12.23□□□□□ -0.45
SCARB2-204ENST00000509994 C20orf194Q5TEA3 1177 aa12.23□□□□□ -0.45
SCARB2-204ENST00000509994 ACER1Q8TDN7 264 aa12.23□□□□□ -0.45
SCARB2-204ENST00000509994 GPATCH3Q96I76 525 aa12.23□□□□□ -0.45
SCARB2-204ENST00000509994 IVNS1ABPQ9Y6Y0 642 aa12.23□□□□□ -0.45
SCARB2-204ENST00000509994 RPTORQ8N122 1335 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 RAD21O60216 631 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 CYP2D6P10635 497 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
SCARB2-204ENST00000509994 ATP5JP18859 108 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 VCAM1P19320 739 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 RGS2P41220 211 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 ATP2B2Q01814 1243 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 TRIM32Q13049 653 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 ZSCAN25Q6NSZ9 544 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 PLEKHH3Q7Z736 793 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 TRIB2Q92519 343 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 PORCNQ9H237 461 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 RPAP3Q9H6T3 665 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-204ENST00000509994 DCP1AQ9NPI6 582 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-204ENST00000509994 PAK6Q9NQU5 681 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-204ENST00000509994 RBPJLQ9UBG7 517 aa12.22□□□□□ -0.45
SCARB2-204ENST00000509994 TCRBV5S4A2TA0A5A2 114 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 ADD2P35612 726 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 SLFNL1Q499Z3 407 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 GPR142Q7Z601 462 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 NECAB2Q7Z6G3 386 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 TRMT44Q8IYL2 757 aaKnown RBP12.21□□□□□ -0.45
SCARB2-204ENST00000509994 SLC44A5Q8NCS7 719 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 PAWRQ96IZ0 340 aaKnown RBP12.21□□□□□ -0.45
SCARB2-204ENST00000509994 APBA2Q99767 749 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 HAUS7Q99871 368 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 SWAP70Q9UH65 585 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 GJD2Q9UKL4 321 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 RABGAP1Q9Y3P9 1069 aa12.21□□□□□ -0.45
SCARB2-204ENST00000509994 TRIOBPQ9H2D6 2365 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 ALPK3Q96L96 1907 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 PRKAB2O43741 272 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 CAPN2P17655 700 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 EVX2Q03828 476 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 PLS1Q14651 629 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 Q3C1V9 767 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 CATSPERGQ6ZRH7 1159 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 TMEM179Q6ZVK1 233 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 DIS3LQ8TF46 1054 aaKnown RBP12.2□□□□□ -0.46
SCARB2-204ENST00000509994 C12orf42Q96LP6 360 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 SH2D4AQ9H788 454 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 ATP8A2Q9NTI2 1148 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 PCDH10Q9P2E7 1040 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 SLC4A4Q9Y6R1 1079 aa12.2□□□□□ -0.46
SCARB2-204ENST00000509994 FRMPD3Q5JV73 1810 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 CYP2D7A0A087X1C5 515 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 XRCC5P13010 732 aaKnown RBP12.19□□□□□ -0.46
SCARB2-204ENST00000509994 CNGA1P29973 690 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 ICA1Q05084 483 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 MFSD14CQ5VZR4 134 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 UBE2Q1Q7Z7E8 422 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 CLEC10AQ8IUN9 316 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 C7orf61Q8IZ16 206 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 SPICE1Q8N0Z3 855 aa12.19□□□□□ -0.46
SCARB2-204ENST00000509994 STK11IPQ8N1F8 1099 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms