RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ZC3H7BQ9UGR2 993 aaKnown RBP10.93□□□□□ -0.66
TRAPPC11-206ENST00000509857 CEP131Q9UPN4 1083 aa10.93□□□□□ -0.66
TRAPPC11-206ENST00000509857 ETV3P41162 512 aa10.92□□□□□ -0.66
TRAPPC11-206ENST00000509857 FAM181AQ8N9Y4 354 aa10.92□□□□□ -0.66
TRAPPC11-206ENST00000509857 ATG4CQ96DT6 458 aa10.92□□□□□ -0.66
TRAPPC11-206ENST00000509857 CCDC74BQ96LY2 380 aa10.92□□□□□ -0.66
TRAPPC11-206ENST00000509857 FERD3LQ96RJ6 166 aa10.92□□□□□ -0.66
TRAPPC11-206ENST00000509857 TPX2Q9ULW0 747 aaKnown RBP10.92□□□□□ -0.66
TRAPPC11-206ENST00000509857 PPT2Q9UMR5 302 aa10.92□□□□□ -0.66
TRAPPC11-206ENST00000509857 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC11-206ENST00000509857 CNTNAP4Q9C0A0 1308 aa10.91□□□□□ -0.66
TRAPPC11-206ENST00000509857 RGS13O14921 159 aa10.91□□□□□ -0.66
TRAPPC11-206ENST00000509857 ZNF865P0CJ78 1059 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC11-206ENST00000509857 SSTR4P31391 388 aa10.91□□□□□ -0.66
TRAPPC11-206ENST00000509857 ARSHQ5FYA8 562 aa10.91□□□□□ -0.66
TRAPPC11-206ENST00000509857 ANTXR1Q9H6X2 564 aa10.91□□□□□ -0.66
TRAPPC11-206ENST00000509857 COL17A1Q9UMD9 1497 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 TNFRSF10CO14798 259 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 PRNPP04156 253 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 CEACAM5P06731 702 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 CYP7A1P22680 504 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 SFRP5Q5T4F7 317 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 ARTNQ5T4W7 220 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 NLRC3Q7RTR2 1065 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 CDH24Q86UP0 819 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 NETO1Q8TDF5 533 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 TNKS2Q9H2K2 1166 aa10.9□□□□□ -0.66
TRAPPC11-206ENST00000509857 RAG1P15918 1043 aa10.89□□□□□ -0.67
TRAPPC11-206ENST00000509857 ATF4P18848 351 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC11-206ENST00000509857 NASPP49321 788 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC11-206ENST00000509857 PHACTR4Q8IZ21 702 aa10.89□□□□□ -0.67
TRAPPC11-206ENST00000509857 TAB3Q8N5C8 712 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC11-206ENST00000509857 CAPN10Q9HC96 672 aa10.89□□□□□ -0.67
TRAPPC11-206ENST00000509857 HYAL3O43820 417 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC11-206ENST00000509857 NME1P15531 152 aaKnown RBP10.88□□□□□ -0.67
TRAPPC11-206ENST00000509857 GNL2Q13823 731 aaKnown RBP10.88□□□□□ -0.67
TRAPPC11-206ENST00000509857 PLD6Q8N2A8 252 aaKnown RBP10.88□□□□□ -0.67
TRAPPC11-206ENST00000509857 BAHD1Q8TBE0 780 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC11-206ENST00000509857 KIF2CQ99661 725 aa10.88□□□□□ -0.67
TRAPPC11-206ENST00000509857 BSDC1Q9NW68 430 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC11-206ENST00000509857 STRIP2Q9ULQ0 834 aa10.88□□□□□ -0.67
TRAPPC11-206ENST00000509857 PLAGL2Q9UPG8 496 aa10.88□□□□□ -0.67
TRAPPC11-206ENST00000509857 GNAT3A8MTJ3 354 aa10.87□□□□□ -0.67
TRAPPC11-206ENST00000509857 UBOX5O94941 541 aa10.87□□□□□ -0.67
TRAPPC11-206ENST00000509857 CCNFP41002 786 aa10.87□□□□□ -0.67
TRAPPC11-206ENST00000509857 KIR3DL1P43629 444 aa10.87□□□□□ -0.67
TRAPPC11-206ENST00000509857 IFI16Q16666 785 aaKnown RBP10.87□□□□□ -0.67
TRAPPC11-206ENST00000509857 NKPD1Q17RQ9 610 aa10.87□□□□□ -0.67
TRAPPC11-206ENST00000509857 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
TRAPPC11-206ENST00000509857 SPACA3Q8IXA5 215 aa10.87□□□□□ -0.67
TRAPPC11-206ENST00000509857 TM9SF2Q99805 663 aa10.87□□□□□ -0.67
TRAPPC11-206ENST00000509857 ARHGAP27Q6ZUM4 889 aa10.86□□□□□ -0.67
TRAPPC11-206ENST00000509857 LSRQ86X29 649 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC11-206ENST00000509857 SLC43A3Q8NBI5 491 aa10.86□□□□□ -0.67
TRAPPC11-206ENST00000509857 RNF141Q8WVD5 230 aa10.86□□□□□ -0.67
TRAPPC11-206ENST00000509857 SRRTQ9BXP5 876 aaKnown RBP10.86□□□□□ -0.67
TRAPPC11-206ENST00000509857 PCMTD2Q9NV79 361 aa10.86□□□□□ -0.67
TRAPPC11-206ENST00000509857 CAPN6Q9Y6Q1 641 aa10.86□□□□□ -0.67
TRAPPC11-206ENST00000509857 SCO2A0A1W2PP80 73 aa10.85□□□□□ -0.67
TRAPPC11-206ENST00000509857 PRR33A8MZF0 331 aa10.85□□□□□ -0.67
TRAPPC11-206ENST00000509857 GIPRP48546 466 aa10.85□□□□□ -0.67
TRAPPC11-206ENST00000509857 ZC3H6P61129 1189 aaKnown RBP10.85□□□□□ -0.67
TRAPPC11-206ENST00000509857 CCDC81Q6ZN84 652 aa10.85□□□□□ -0.67
TRAPPC11-206ENST00000509857 MFSD4AQ8N468 514 aa10.85□□□□□ -0.67
TRAPPC11-206ENST00000509857 OR6P1Q8NGX9 317 aa10.85□□□□□ -0.67
TRAPPC11-206ENST00000509857 SNX11Q9Y5W9 270 aa10.85□□□□□ -0.67
TRAPPC11-206ENST00000509857 TMEM265A0A087WTH1 108 aa10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 ITIH2P19823 946 aa10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 POLR2BP30876 1174 aaKnown RBP10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 VPS37DQ86XT2 251 aa10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 VWCEQ96DN2 955 aa10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 MISP3Q96FF7 219 aa10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 SHDQ96IW2 340 aa10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 KREMEN1Q96MU8 473 aa10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 ASPNQ9BXN1 380 aa10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRAPPC11-206ENST00000509857 BAZ1AQ9NRL2 1556 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 ACRP10323 421 aa10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 GBP1P32455 592 aa10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 CLCN7P51798 805 aa10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 EIF6P56537 245 aaKnown RBP10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 FBXW10Q5XX13 1052 aa10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 NPM2Q86SE8 214 aaKnown RBP10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 VSIG10LQ86VR7 867 aa10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 SLC9A7Q96T83 725 aa10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 ZFP64Q9NPA5 681 aa10.83□□□□□ -0.68
TRAPPC11-206ENST00000509857 NFXL1Q6ZNB6 911 aa10.82□□□□□ -0.68
TRAPPC11-206ENST00000509857 STK11IPQ8N1F8 1099 aa10.82□□□□□ -0.68
TRAPPC11-206ENST00000509857 PIWIL2Q8TC59 973 aaKnown RBP10.82□□□□□ -0.68
TRAPPC11-206ENST00000509857 Q96M66 194 aa10.82□□□□□ -0.68
TRAPPC11-206ENST00000509857 FBXL18Q96ME1 805 aa10.82□□□□□ -0.68
TRAPPC11-206ENST00000509857 C8orf37Q96NL8 207 aa10.82□□□□□ -0.68
TRAPPC11-206ENST00000509857 CRBNQ96SW2 442 aa10.82□□□□□ -0.68
TRAPPC11-206ENST00000509857 GMLQ99445 158 aa10.82□□□□□ -0.68
TRAPPC11-206ENST00000509857 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
TRAPPC11-206ENST00000509857 FGRP09769 529 aa10.81□□□□□ -0.68
TRAPPC11-206ENST00000509857 GUCY2CP25092 1073 aa10.81□□□□□ -0.68
TRAPPC11-206ENST00000509857 PRKCQQ04759 706 aa10.81□□□□□ -0.68
TRAPPC11-206ENST00000509857 C19orf47Q8N9M1 422 aaKnown RBP10.81□□□□□ -0.68
TRAPPC11-206ENST00000509857 BCL7CQ8WUZ0 217 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms