RNA–Protein interactions for RNA: ENST00000509639.5

DDR1-265, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-265ENST00000509639 ALX1Q15699 326 aa23.66■■□□□ 1.38
DDR1-265ENST00000509639 PPP4R2Q9NY27 417 aa23.66■■□□□ 1.38
DDR1-265ENST00000509639 RAD50Q92878 1312 aa23.65■■□□□ 1.38
DDR1-265ENST00000509639 GUCY1A2P33402 732 aa23.65■■□□□ 1.38
DDR1-265ENST00000509639 USP14P54578 494 aa23.65■■□□□ 1.38
DDR1-265ENST00000509639 PABPC4Q13310 644 aaKnown RBP eCLIP23.65■■□□□ 1.38
DDR1-265ENST00000509639 RUFY2Q8WXA3 655 aa23.65■■□□□ 1.38
DDR1-265ENST00000509639 PNMA3Q9UL41 463 aa23.65■■□□□ 1.38
DDR1-265ENST00000509639 CASP8AP2Q9UKL3 1982 aa23.64■■□□□ 1.38
DDR1-265ENST00000509639 TLR2O60603 784 aa23.64■■□□□ 1.37
DDR1-265ENST00000509639 ICA1Q05084 483 aa23.64■■□□□ 1.37
DDR1-265ENST00000509639 TREML2Q5T2D2 321 aa23.64■■□□□ 1.37
DDR1-265ENST00000509639 USP17L2Q6R6M4 530 aa23.64■■□□□ 1.37
DDR1-265ENST00000509639 RASA1P20936 1047 aa23.63■■□□□ 1.37
DDR1-265ENST00000509639 ZNF444Q8N0Y2 327 aaPredicted RBP23.63■■□□□ 1.37
DDR1-265ENST00000509639 KIAA1683Q9H0B3 1180 aa23.63■■□□□ 1.37
DDR1-265ENST00000509639 ARHGEF10LQ9HCE6 1279 aa23.63■■□□□ 1.37
DDR1-265ENST00000509639 FGAP02671 866 aa23.62■■□□□ 1.37
DDR1-265ENST00000509639 CHMLP26374 656 aa23.62■■□□□ 1.37
DDR1-265ENST00000509639 DGKZQ13574 1117 aa23.62■■□□□ 1.37
DDR1-265ENST00000509639 ZYXQ15942 572 aaKnown RBP23.62■■□□□ 1.37
DDR1-265ENST00000509639 SKAP1Q86WV1 359 aa23.62■■□□□ 1.37
DDR1-265ENST00000509639 SH2D4AQ9H788 454 aa23.62■■□□□ 1.37
DDR1-265ENST00000509639 ANAPC4Q9UJX5 808 aa23.62■■□□□ 1.37
DDR1-265ENST00000509639 PRDM1O75626 825 aa23.61■■□□□ 1.37
DDR1-265ENST00000509639 CYP2C8P10632 490 aa23.61■■□□□ 1.37
DDR1-265ENST00000509639 OSBPP22059 807 aa23.61■■□□□ 1.37
DDR1-265ENST00000509639 SP3Q02447 781 aa23.61■■□□□ 1.37
DDR1-265ENST00000509639 BMP2KLQ5H9B9 411 aa23.61■■□□□ 1.37
DDR1-265ENST00000509639 ACER1Q8TDN7 264 aa23.61■■□□□ 1.37
DDR1-265ENST00000509639 SMCR8Q8TEV9 937 aaPredicted RBP23.61■■□□□ 1.37
DDR1-265ENST00000509639 ERO1AQ96HE7 468 aa23.61■■□□□ 1.37
DDR1-265ENST00000509639 KANSL2Q9H9L4 492 aa23.61■■□□□ 1.37
DDR1-265ENST00000509639 CTDSPL2Q05D32 466 aa23.6■■□□□ 1.37
DDR1-265ENST00000509639 TNS4Q8IZW8 715 aa23.6■■□□□ 1.37
DDR1-265ENST00000509639 C12orf42Q96LP6 360 aa23.6■■□□□ 1.37
DDR1-265ENST00000509639 DSCC1Q9BVC3 393 aa23.6■■□□□ 1.37
DDR1-265ENST00000509639 EMILIN3Q9NT22 766 aa23.6■■□□□ 1.37
DDR1-265ENST00000509639 ADGRA2Q96PE1 1338 aa23.59■■□□□ 1.37
DDR1-265ENST00000509639 GREB1LQ9C091 1923 aaPredicted RBP23.59■■□□□ 1.37
DDR1-265ENST00000509639 IRX3P78415 501 aaPredicted RBP23.59■■□□□ 1.37
DDR1-265ENST00000509639 CLEC10AQ8IUN9 316 aa23.59■■□□□ 1.37
DDR1-265ENST00000509639 TSPY3P0CV98 308 aa23.58■■□□□ 1.37
DDR1-265ENST00000509639 TSPY8P0CW00 308 aa23.58■■□□□ 1.37
DDR1-265ENST00000509639 ATP2B2Q01814 1243 aa23.58■■□□□ 1.37
DDR1-265ENST00000509639 CTU1Q7Z7A3 348 aaKnown RBP23.58■■□□□ 1.37
DDR1-265ENST00000509639 CPA4Q9UI42 421 aa23.58■■□□□ 1.37
DDR1-265ENST00000509639 PLIN4Q96Q06 1357 aa23.57■■□□□ 1.36
DDR1-265ENST00000509639 HOXA7P31268 230 aaPredicted RBP23.57■■□□□ 1.36
DDR1-265ENST00000509639 KIF22Q14807 665 aa23.57■■□□□ 1.36
DDR1-265ENST00000509639 C17orf99Q6UX52 265 aa23.57■■□□□ 1.36
DDR1-265ENST00000509639 ASCC2Q9H1I8 757 aaPredicted RBP23.57■■□□□ 1.36
DDR1-265ENST00000509639 CTNNA3Q9UI47 895 aa23.57■■□□□ 1.36
DDR1-265ENST00000509639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.57■■□□□ 1.36
DDR1-265ENST00000509639 LAMA4Q16363 1823 aa23.56■■□□□ 1.36
DDR1-265ENST00000509639 A0A1W2PRG0 241 aa23.56■■□□□ 1.36
DDR1-265ENST00000509639 EEF2P13639 858 aaKnown RBP23.56■■□□□ 1.36
DDR1-265ENST00000509639 VCAM1P19320 739 aa23.56■■□□□ 1.36
DDR1-265ENST00000509639 HAND2P61296 217 aa23.56■■□□□ 1.36
DDR1-265ENST00000509639 ARHGEF6Q15052 776 aa23.56■■□□□ 1.36
DDR1-265ENST00000509639 CD99L2Q8TCZ2 262 aa23.56■■□□□ 1.36
DDR1-265ENST00000509639 IL25Q9H293 177 aa23.56■■□□□ 1.36
DDR1-265ENST00000509639 TOMM22Q9NS69 142 aa23.56■■□□□ 1.36
DDR1-265ENST00000509639 TMX2Q9Y320 296 aa23.56■■□□□ 1.36
DDR1-265ENST00000509639 TSPY2A6NKD2 308 aa23.55■■□□□ 1.36
DDR1-265ENST00000509639 ZNF213O14771 459 aa23.55■■□□□ 1.36
DDR1-265ENST00000509639 ORC4O43929 436 aa23.55■■□□□ 1.36
DDR1-265ENST00000509639 PCP11498 1178 aaKnown RBP23.55■■□□□ 1.36
DDR1-265ENST00000509639 GCLCP48506 637 aaPredicted RBP23.55■■□□□ 1.36
DDR1-265ENST00000509639 NEDD1Q8NHV4 660 aa23.55■■□□□ 1.36
DDR1-265ENST00000509639 LPAR1Q92633 364 aa23.55■■□□□ 1.36
DDR1-265ENST00000509639 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.55■■□□□ 1.36
DDR1-265ENST00000509639 RNF41Q9H4P4 317 aaPredicted RBP23.55■■□□□ 1.36
DDR1-265ENST00000509639 GOPCQ9HD26 462 aa23.55■■□□□ 1.36
DDR1-265ENST00000509639 USP17L15C9J2P7 530 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 USP17L13C9JLJ4 530 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 USP17L11C9JVI0 530 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 USP17L18D6R9N7 530 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 USP17L22D6RA61 530 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 USP17L17D6RBQ6 530 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 USP17L19D6RCP7 530 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 USP17L20D6RJB6 530 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 SGSM2O43147 1006 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 RANBP6O60518 1105 aaKnown RBP23.54■■□□□ 1.36
DDR1-265ENST00000509639 BCRP11274 1271 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 TFAP4Q01664 338 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 USP17L24Q0WX57 530 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 IMMTQ16891 758 aaKnown RBP23.54■■□□□ 1.36
DDR1-265ENST00000509639 FAM47AQ5JRC9 791 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 PPP4R3BQ5MIZ7 849 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 SIAH1Q8IUQ4 282 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 VCPKMTQ9H867 229 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 NYAP2Q9P242 653 aa23.54■■□□□ 1.36
DDR1-265ENST00000509639 IGKV6D-41A0A0C4DH26 115 aa23.53■■□□□ 1.36
DDR1-265ENST00000509639 FGRP09769 529 aa23.53■■□□□ 1.36
DDR1-265ENST00000509639 LACTBP83111 547 aaPredicted RBP23.53■■□□□ 1.36
DDR1-265ENST00000509639 RRP12Q5JTH9 1297 aaKnown RBP23.53■■□□□ 1.36
DDR1-265ENST00000509639 AKNAD1Q5T1N1 836 aa23.53■■□□□ 1.36
DDR1-265ENST00000509639 MFSD6Q6ZSS7 791 aa23.53■■□□□ 1.36
DDR1-265ENST00000509639 GTF3C2Q8WUA4 911 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms