RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 STK11IPQ8N1F8 1099 aa23.41■■□□□ 1.34
FGFR4-211ENST00000509511 GUCY1A2P33402 732 aa23.4■■□□□ 1.34
FGFR4-211ENST00000509511 ICA1Q05084 483 aa23.4■■□□□ 1.34
FGFR4-211ENST00000509511 PABPC4Q13310 644 aaKnown RBP eCLIP23.4■■□□□ 1.34
FGFR4-211ENST00000509511 BMP2KLQ5H9B9 411 aa23.4■■□□□ 1.34
FGFR4-211ENST00000509511 PNMA3Q9UL41 463 aa23.4■■□□□ 1.34
FGFR4-211ENST00000509511 LAMA4Q16363 1823 aa23.39■■□□□ 1.34
FGFR4-211ENST00000509511 RASA1P20936 1047 aa23.39■■□□□ 1.34
FGFR4-211ENST00000509511 CHMLP26374 656 aa23.39■■□□□ 1.34
FGFR4-211ENST00000509511 USP14P54578 494 aa23.39■■□□□ 1.34
FGFR4-211ENST00000509511 ZNF296Q8WUU4 475 aaPredicted RBP23.39■■□□□ 1.34
FGFR4-211ENST00000509511 R3HDMLQ9H3Y0 253 aa23.39■■□□□ 1.34
FGFR4-211ENST00000509511 SH2D4AQ9H788 454 aa23.39■■□□□ 1.34
FGFR4-211ENST00000509511 GREB1LQ9C091 1923 aaPredicted RBP23.39■■□□□ 1.33
FGFR4-211ENST00000509511 FKTNO75072 461 aa23.38■■□□□ 1.33
FGFR4-211ENST00000509511 FGAP02671 866 aa23.38■■□□□ 1.33
FGFR4-211ENST00000509511 TREML2Q5T2D2 321 aa23.38■■□□□ 1.33
FGFR4-211ENST00000509511 USP17L2Q6R6M4 530 aa23.38■■□□□ 1.33
FGFR4-211ENST00000509511 KIAA1683Q9H0B3 1180 aa23.38■■□□□ 1.33
FGFR4-211ENST00000509511 ARHGEF10LQ9HCE6 1279 aa23.38■■□□□ 1.33
FGFR4-211ENST00000509511 TLR2O60603 784 aa23.37■■□□□ 1.33
FGFR4-211ENST00000509511 PRDM1O75626 825 aa23.37■■□□□ 1.33
FGFR4-211ENST00000509511 DGKZQ13574 1117 aa23.37■■□□□ 1.33
FGFR4-211ENST00000509511 ZYXQ15942 572 aaKnown RBP23.37■■□□□ 1.33
FGFR4-211ENST00000509511 COL13A1Q5TAT6 717 aaPredicted RBP23.37■■□□□ 1.33
FGFR4-211ENST00000509511 SMCR8Q8TEV9 937 aaPredicted RBP23.37■■□□□ 1.33
FGFR4-211ENST00000509511 DSCC1Q9BVC3 393 aa23.37■■□□□ 1.33
FGFR4-211ENST00000509511 ANAPC4Q9UJX5 808 aa23.37■■□□□ 1.33
FGFR4-211ENST00000509511 PLIN4Q96Q06 1357 aa23.37■■□□□ 1.33
FGFR4-211ENST00000509511 CLEC10AQ8IUN9 316 aa23.36■■□□□ 1.33
FGFR4-211ENST00000509511 ZNF444Q8N0Y2 327 aaPredicted RBP23.36■■□□□ 1.33
FGFR4-211ENST00000509511 ACER1Q8TDN7 264 aa23.36■■□□□ 1.33
FGFR4-211ENST00000509511 C12orf42Q96LP6 360 aa23.36■■□□□ 1.33
FGFR4-211ENST00000509511 KANSL2Q9H9L4 492 aa23.36■■□□□ 1.33
FGFR4-211ENST00000509511 CASP8AP2Q9UKL3 1982 aa23.36■■□□□ 1.33
FGFR4-211ENST00000509511 CYP2C8P10632 490 aa23.35■■□□□ 1.33
FGFR4-211ENST00000509511 CTDSPL2Q05D32 466 aa23.35■■□□□ 1.33
FGFR4-211ENST00000509511 ADGRA2Q96PE1 1338 aa23.35■■□□□ 1.33
FGFR4-211ENST00000509511 TSPY3P0CV98 308 aa23.34■■□□□ 1.33
FGFR4-211ENST00000509511 TSPY8P0CW00 308 aa23.34■■□□□ 1.33
FGFR4-211ENST00000509511 OSBPP22059 807 aa23.34■■□□□ 1.33
FGFR4-211ENST00000509511 IRX3P78415 501 aaPredicted RBP23.34■■□□□ 1.33
FGFR4-211ENST00000509511 IL25Q9H293 177 aa23.34■■□□□ 1.33
FGFR4-211ENST00000509511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.34■■□□□ 1.33
FGFR4-211ENST00000509511 ATP2B2Q01814 1243 aa23.33■■□□□ 1.33
FGFR4-211ENST00000509511 SP3Q02447 781 aa23.33■■□□□ 1.33
FGFR4-211ENST00000509511 ERO1AQ96HE7 468 aa23.33■■□□□ 1.33
FGFR4-211ENST00000509511 EMILIN3Q9NT22 766 aa23.33■■□□□ 1.33
FGFR4-211ENST00000509511 CTNNA3Q9UI47 895 aa23.33■■□□□ 1.33
FGFR4-211ENST00000509511 SGSM2O43147 1006 aa23.33■■□□□ 1.32
FGFR4-211ENST00000509511 PCP11498 1178 aaKnown RBP23.33■■□□□ 1.32
FGFR4-211ENST00000509511 VCAM1P19320 739 aa23.33■■□□□ 1.32
FGFR4-211ENST00000509511 HAND2P61296 217 aa23.33■■□□□ 1.32
FGFR4-211ENST00000509511 RNF41Q9H4P4 317 aaPredicted RBP23.33■■□□□ 1.32
FGFR4-211ENST00000509511 TOMM22Q9NS69 142 aa23.33■■□□□ 1.32
FGFR4-211ENST00000509511 CPA4Q9UI42 421 aa23.33■■□□□ 1.32
FGFR4-211ENST00000509511 A0A1W2PRG0 241 aa23.32■■□□□ 1.32
FGFR4-211ENST00000509511 ORC4O43929 436 aa23.32■■□□□ 1.32
FGFR4-211ENST00000509511 EEF2P13639 858 aaKnown RBP23.32■■□□□ 1.32
FGFR4-211ENST00000509511 HOXA7P31268 230 aaPredicted RBP23.32■■□□□ 1.32
FGFR4-211ENST00000509511 IMMTQ16891 758 aaKnown RBP23.32■■□□□ 1.32
FGFR4-211ENST00000509511 CASC1Q6TDU7 716 aa23.32■■□□□ 1.32
FGFR4-211ENST00000509511 CTU1Q7Z7A3 348 aaKnown RBP23.32■■□□□ 1.32
FGFR4-211ENST00000509511 LPAR1Q92633 364 aa23.32■■□□□ 1.32
FGFR4-211ENST00000509511 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.32■■□□□ 1.32
FGFR4-211ENST00000509511 ASCC2Q9H1I8 757 aaPredicted RBP23.32■■□□□ 1.32
FGFR4-211ENST00000509511 TSPY2A6NKD2 308 aa23.31■■□□□ 1.32
FGFR4-211ENST00000509511 ZNF213O14771 459 aa23.31■■□□□ 1.32
FGFR4-211ENST00000509511 PPP4R3BQ5MIZ7 849 aa23.31■■□□□ 1.32
FGFR4-211ENST00000509511 C17orf99Q6UX52 265 aa23.31■■□□□ 1.32
FGFR4-211ENST00000509511 TNS4Q8IZW8 715 aa23.31■■□□□ 1.32
FGFR4-211ENST00000509511 GOPCQ9HD26 462 aa23.31■■□□□ 1.32
FGFR4-211ENST00000509511 TMX2Q9Y320 296 aa23.31■■□□□ 1.32
FGFR4-211ENST00000509511 RANBP6O60518 1105 aaKnown RBP23.3■■□□□ 1.32
FGFR4-211ENST00000509511 TFAP4Q01664 338 aa23.3■■□□□ 1.32
FGFR4-211ENST00000509511 KIF22Q14807 665 aa23.3■■□□□ 1.32
FGFR4-211ENST00000509511 FAM47AQ5JRC9 791 aa23.3■■□□□ 1.32
FGFR4-211ENST00000509511 AKNAD1Q5T1N1 836 aa23.3■■□□□ 1.32
FGFR4-211ENST00000509511 MFSD6Q6ZSS7 791 aa23.3■■□□□ 1.32
FGFR4-211ENST00000509511 TBC1D10CQ8IV04 446 aa23.3■■□□□ 1.32
FGFR4-211ENST00000509511 NEDD1Q8NHV4 660 aa23.3■■□□□ 1.32
FGFR4-211ENST00000509511 STAG1Q8WVM7 1258 aa23.3■■□□□ 1.32
FGFR4-211ENST00000509511 VCPKMTQ9H867 229 aa23.3■■□□□ 1.32
FGFR4-211ENST00000509511 IGKV6D-41A0A0C4DH26 115 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 USP17L15C9J2P7 530 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 USP17L13C9JLJ4 530 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 USP17L11C9JVI0 530 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 USP17L18D6R9N7 530 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 USP17L22D6RA61 530 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 USP17L17D6RBQ6 530 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 USP17L19D6RCP7 530 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 USP17L20D6RJB6 530 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 CDC45O75419 566 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 FGRP09769 529 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 BCRP11274 1271 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 GCLCP48506 637 aaPredicted RBP23.29■■□□□ 1.32
FGFR4-211ENST00000509511 USP17L24Q0WX57 530 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 ARHGEF6Q15052 776 aa23.29■■□□□ 1.32
FGFR4-211ENST00000509511 RRP12Q5JTH9 1297 aaKnown RBP23.29■■□□□ 1.32
FGFR4-211ENST00000509511 CD99L2Q8TCZ2 262 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms