RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 ZYXQ15942 572 aaKnown RBP17.63■□□□□ 0.41
HMGCL-208ENST00000509389 CERKLQ49MI3 558 aaPredicted RBP17.63■□□□□ 0.41
HMGCL-208ENST00000509389 SLC9C2Q5TAH2 1124 aa17.63■□□□□ 0.41
HMGCL-208ENST00000509389 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.63■□□□□ 0.41
HMGCL-208ENST00000509389 TRIB2Q92519 343 aa17.63■□□□□ 0.41
HMGCL-208ENST00000509389 C12orf42Q96LP6 360 aa17.63■□□□□ 0.41
HMGCL-208ENST00000509389 NR2E3Q9Y5X4 410 aa17.63■□□□□ 0.41
HMGCL-208ENST00000509389 RPTORQ8N122 1335 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 CYP2B6P20813 491 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 PDE4AP27815 886 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 SHMT1P34896 483 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 ERVK-9P63128 1117 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 ERVK-24P63145 666 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 RAB3GAP1Q15042 981 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 ABCB5Q2M3G0 1257 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 CHD1LQ86WJ1 897 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 GTF3C2Q8WUA4 911 aaPredicted RBP17.62■□□□□ 0.41
HMGCL-208ENST00000509389 PAWRQ96IZ0 340 aaKnown RBP17.62■□□□□ 0.41
HMGCL-208ENST00000509389 DNAJC2Q99543 621 aaKnown RBP17.62■□□□□ 0.41
HMGCL-208ENST00000509389 FEZ1Q99689 392 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 NUDT12Q9BQG2 462 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 PAGR1Q9BTK6 254 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 PORCNQ9H237 461 aa17.62■□□□□ 0.41
HMGCL-208ENST00000509389 HMX1Q9NP08 348 aaPredicted RBP17.62■□□□□ 0.41
HMGCL-208ENST00000509389 ALPK3Q96L96 1907 aa17.61■□□□□ 0.41
HMGCL-208ENST00000509389 GOLIM4O00461 696 aa17.61■□□□□ 0.41
HMGCL-208ENST00000509389 POLR3DP05423 398 aaPredicted RBP17.61■□□□□ 0.41
HMGCL-208ENST00000509389 IFIT2P09913 472 aaKnown RBP17.61■□□□□ 0.41
HMGCL-208ENST00000509389 MAPK4P31152 587 aa17.61■□□□□ 0.41
HMGCL-208ENST00000509389 ACER1Q8TDN7 264 aa17.61■□□□□ 0.41
HMGCL-208ENST00000509389 DIS3LQ8TF46 1054 aaKnown RBP17.61■□□□□ 0.41
HMGCL-208ENST00000509389 SOCS4Q8WXH5 440 aa17.61■□□□□ 0.41
HMGCL-208ENST00000509389 CRNKL1Q9BZJ0 848 aaKnown RBP17.61■□□□□ 0.41
HMGCL-208ENST00000509389 KIAA1683Q9H0B3 1180 aa17.61■□□□□ 0.41
HMGCL-208ENST00000509389 BCL11AQ9H165 835 aa17.61■□□□□ 0.41
HMGCL-208ENST00000509389 CABP5Q9NP86 173 aa17.61■□□□□ 0.41
HMGCL-208ENST00000509389 RBM27Q9P2N5 1060 aaKnown RBP17.61■□□□□ 0.41
HMGCL-208ENST00000509389 ZNF532Q9HCE3 1301 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 TCRBV5S4A2TA0A5A2 114 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP17L15C9J2P7 530 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP17L13C9JLJ4 530 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 RAB11FIP3O75154 756 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 XRCC5P13010 732 aaKnown RBP17.6■□□□□ 0.41
HMGCL-208ENST00000509389 GUCY1A2P33402 732 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP14P54578 494 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 EVX2Q03828 476 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 GABPAQ06546 454 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 USP6NLQ92738 828 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 EDC3Q96F86 508 aaKnown RBP17.6■□□□□ 0.41
HMGCL-208ENST00000509389 SALL3Q9BXA9 1300 aa17.6■□□□□ 0.41
HMGCL-208ENST00000509389 EVI5O60447 810 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 CNMDO75829 334 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 MAP3K21Q5TCX8 1036 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 CATSPERGQ6ZRH7 1159 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 GPR142Q7Z601 462 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 NECAB2Q7Z6G3 386 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 PLEKHH3Q7Z736 793 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 CCAR1Q8IX12 1150 aaKnown RBP17.59■□□□□ 0.41
HMGCL-208ENST00000509389 LCORLQ8N3X6 602 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 ANKLE1Q8NAG6 615 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 PRO3102Q9H379 93 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 MCM9Q9NXL9 1143 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
HMGCL-208ENST00000509389 PRKAR2AP13861 404 aaKnown RBP17.58■□□□□ 0.4
HMGCL-208ENST00000509389 VCAM1P19320 739 aa17.58■□□□□ 0.4
HMGCL-208ENST00000509389 MORN1Q5T089 497 aa17.58■□□□□ 0.4
HMGCL-208ENST00000509389 SDR42E1Q8WUS8 393 aa17.58■□□□□ 0.4
HMGCL-208ENST00000509389 MNX1P50219 401 aaPredicted RBP17.57■□□□□ 0.4
HMGCL-208ENST00000509389 SEPT2Q15019 361 aa17.57■□□□□ 0.4
HMGCL-208ENST00000509389 TRMT44Q8IYL2 757 aaKnown RBP17.57■□□□□ 0.4
HMGCL-208ENST00000509389 BOLA2Q9H3K6 86 aa17.57■□□□□ 0.4
HMGCL-208ENST00000509389 DCP1AQ9NPI6 582 aaPredicted RBP17.57■□□□□ 0.4
HMGCL-208ENST00000509389 PAG1Q9NWQ8 432 aa17.57■□□□□ 0.4
HMGCL-208ENST00000509389 RANBP2P49792 3224 aaKnown RBP17.56■□□□□ 0.4
HMGCL-208ENST00000509389 CYP2D6P10635 497 aa17.56■□□□□ 0.4
HMGCL-208ENST00000509389 ZKSCAN1P17029 563 aaPredicted RBP17.56■□□□□ 0.4
HMGCL-208ENST00000509389 ATP5JP18859 108 aa17.56■□□□□ 0.4
HMGCL-208ENST00000509389 RGS2P41220 211 aa17.56■□□□□ 0.4
HMGCL-208ENST00000509389 CCL14Q16627 93 aa17.56■□□□□ 0.4
HMGCL-208ENST00000509389 SLFNL1Q499Z3 407 aa17.56■□□□□ 0.4
HMGCL-208ENST00000509389 LNPKQ9C0E8 428 aa17.56■□□□□ 0.4
HMGCL-208ENST00000509389 ARMT1Q9H993 441 aa17.56■□□□□ 0.4
HMGCL-208ENST00000509389 OGDHLQ9ULD0 1010 aa17.56■□□□□ 0.4
HMGCL-208ENST00000509389 MYH8P13535 1937 aa17.56■□□□□ 0.4
HMGCL-208ENST00000509389 A0A1W2PRG0 241 aa17.55■□□□□ 0.4
HMGCL-208ENST00000509389 MPHOSPH10O00566 681 aaKnown RBP17.55■□□□□ 0.4
HMGCL-208ENST00000509389 ADD2P35612 726 aa17.55■□□□□ 0.4
HMGCL-208ENST00000509389 CCNA1P78396 465 aa17.55■□□□□ 0.4
HMGCL-208ENST00000509389 CACNB2Q08289 660 aaPredicted RBP17.55■□□□□ 0.4
HMGCL-208ENST00000509389 LBX2Q6XYB7 198 aa17.55■□□□□ 0.4
HMGCL-208ENST00000509389 APBA2Q99767 749 aa17.55■□□□□ 0.4
HMGCL-208ENST00000509389 NBPF3Q9H094 633 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms