RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.48■□□□□ 0.39
RNF4-213ENST00000509388 STX8Q9UNK0 236 aa17.48■□□□□ 0.39
RNF4-213ENST00000509388 TRIM75PA6NK02 468 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 ZBTB48P10074 688 aaPredicted RBP17.47■□□□□ 0.39
RNF4-213ENST00000509388 ANAPC15P60006 121 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 HTRA3P83110 453 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 SPP2Q13103 211 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 SPRYD7Q5W111 196 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 CYP4F22Q6NT55 531 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 RASAL3Q86YV0 1011 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 CEP95Q96GE4 821 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 WDR18Q9BV38 432 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 SIPA1L1O43166 1804 aa17.47■□□□□ 0.39
RNF4-213ENST00000509388 LAMB1P07942 1786 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 USP17L10C9JJH3 530 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 CXCL11O14625 94 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 IRF6O14896 467 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 TTLL1O95922 423 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 SLC10A3P09131 477 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 EEF2P13639 858 aaKnown RBP17.46■□□□□ 0.39
RNF4-213ENST00000509388 GUCY1A2P33402 732 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 FGD1P98174 961 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 ADCK5Q3MIX3 580 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 ZSCAN10Q96SZ4 725 aaPredicted RBP17.46■□□□□ 0.39
RNF4-213ENST00000509388 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.46■□□□□ 0.39
RNF4-213ENST00000509388 TCP11L1Q9NUJ3 509 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 MTMR4Q9NYA4 1195 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 AFG3L2Q9Y4W6 797 aa17.46■□□□□ 0.39
RNF4-213ENST00000509388 PLIN4Q96Q06 1357 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 IGKV6D-41A0A0C4DH26 115 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 IFIT3O14879 490 aaKnown RBP17.45■□□□□ 0.38
RNF4-213ENST00000509388 PRC1O43663 620 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 RAD21O60216 631 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 NMT2O60551 498 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 GTF2A2P52657 109 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 SNAPC2Q13487 334 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 DHX32Q7L7V1 743 aaKnown RBP17.45■□□□□ 0.38
RNF4-213ENST00000509388 CHST3Q7LGC8 479 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 MB21D2Q8IYB1 491 aaPredicted RBP17.45■□□□□ 0.38
RNF4-213ENST00000509388 CAPNS2Q96L46 248 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 TTC14Q96N46 770 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 TMOD4Q9NZQ9 345 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 NYAP2Q9P242 653 aa17.45■□□□□ 0.38
RNF4-213ENST00000509388 C19orf81C9J6K1 198 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 CASTP20810 708 aaKnown RBP17.44■□□□□ 0.38
RNF4-213ENST00000509388 USP14P54578 494 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 NOGQ13253 232 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 MTMR2Q13614 643 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 CYB5R4Q7L1T6 521 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 DGKHQ86XP1 1220 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 CLEC10AQ8IUN9 316 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 ACER1Q8TDN7 264 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 TNKSO95271 1327 aa17.44■□□□□ 0.38
RNF4-213ENST00000509388 MANSC4A6NHS7 340 aaPredicted RBP17.43■□□□□ 0.38
RNF4-213ENST00000509388 CETPP11597 493 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 GJA5P36382 358 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 BACE1P56817 501 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 ZYXQ15942 572 aaKnown RBP17.43■□□□□ 0.38
RNF4-213ENST00000509388 TMEM67Q5HYA8 995 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 IFIT1BQ5T764 474 aaKnown RBP17.43■□□□□ 0.38
RNF4-213ENST00000509388 USP17L2Q6R6M4 530 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 FASTKD5Q7L8L6 764 aaKnown RBP17.43■□□□□ 0.38
RNF4-213ENST00000509388 NKX2-3Q8TAU0 364 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 TMEM87BQ96K49 555 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 TM6SF1Q9BZW5 370 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 KAT14Q9H8E8 782 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 GOPCQ9HD26 462 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 KCNH4Q9UQ05 1017 aa17.43■□□□□ 0.38
RNF4-213ENST00000509388 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
RNF4-213ENST00000509388 TOP1P11387 765 aaKnown RBP17.42■□□□□ 0.38
RNF4-213ENST00000509388 HMGCS2P54868 508 aa17.42■□□□□ 0.38
RNF4-213ENST00000509388 WTAPQ15007 396 aa17.42■□□□□ 0.38
RNF4-213ENST00000509388 NFXL1Q6ZNB6 911 aa17.42■□□□□ 0.38
RNF4-213ENST00000509388 MKL1Q969V6 931 aa17.42■□□□□ 0.38
RNF4-213ENST00000509388 MTA3Q9BTC8 594 aa17.42■□□□□ 0.38
RNF4-213ENST00000509388 KIAA1683Q9H0B3 1180 aa17.42■□□□□ 0.38
RNF4-213ENST00000509388 TMX2Q9Y320 296 aa17.42■□□□□ 0.38
RNF4-213ENST00000509388 CCL15-CCL14A0A0B4J2E2 113 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 A0A1W2PRG0 241 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 FAM155AB1AL88 458 aaPredicted RBP17.41■□□□□ 0.38
RNF4-213ENST00000509388 RPS6KB1P23443 525 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 RBM25P49756 843 aaKnown RBP17.41■□□□□ 0.38
RNF4-213ENST00000509388 VEGFBP49765 207 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 INHBEP58166 350 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 SREBF2Q12772 1141 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 CCL15Q16663 113 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 GADL1Q6ZQY3 521 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 RUFY3Q7L099 469 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 SIAH1Q8IUQ4 282 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 LRRC47Q8N1G4 583 aaKnown RBP17.41■□□□□ 0.38
RNF4-213ENST00000509388 TMTC2Q8N394 836 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 TMEM47Q9BQJ4 181 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 LRRC2Q9BYS8 371 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
RNF4-213ENST00000509388 SYNPO2Q9UMS6 1093 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms