RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ZNF236Q9UL36 1845 aa19.57■□□□□ 0.72
CXCL1-202ENST00000509101 RLFQ13129 1914 aa19.57■□□□□ 0.72
CXCL1-202ENST00000509101 IPO8O15397 1037 aaKnown RBP19.56■□□□□ 0.72
CXCL1-202ENST00000509101 CYP7A1P22680 504 aa19.56■□□□□ 0.72
CXCL1-202ENST00000509101 CCNA1P78396 465 aa19.56■□□□□ 0.72
CXCL1-202ENST00000509101 MIGA1Q8NAN2 632 aa19.56■□□□□ 0.72
CXCL1-202ENST00000509101 EDC3Q96F86 508 aaKnown RBP19.56■□□□□ 0.72
CXCL1-202ENST00000509101 MYH8P13535 1937 aa19.56■□□□□ 0.72
CXCL1-202ENST00000509101 A0A0G2JMZ2 1700 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 USP17L15C9J2P7 530 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 USP17L13C9JLJ4 530 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 USP17L11C9JVI0 530 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 USP17L18D6R9N7 530 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 USP17L22D6RA61 530 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 USP17L17D6RBQ6 530 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 USP17L19D6RCP7 530 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 USP17L20D6RJB6 530 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 GLRX3O76003 335 aaKnown RBP19.55■□□□□ 0.72
CXCL1-202ENST00000509101 USP17L24Q0WX57 530 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 RAB3GAP1Q15042 981 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 MFSD14CQ5VZR4 134 aa19.55■□□□□ 0.72
CXCL1-202ENST00000509101 SENP6Q9GZR1 1112 aaPredicted RBP19.55■□□□□ 0.72
CXCL1-202ENST00000509101 BCAR3O75815 825 aa19.54■□□□□ 0.72
CXCL1-202ENST00000509101 IDH1O75874 414 aaKnown RBP19.54■□□□□ 0.72
CXCL1-202ENST00000509101 VCAM1P19320 739 aa19.54■□□□□ 0.72
CXCL1-202ENST00000509101 CNGA1P29973 690 aa19.54■□□□□ 0.72
CXCL1-202ENST00000509101 USP5P45974 858 aa19.54■□□□□ 0.72
CXCL1-202ENST00000509101 POLA2Q14181 598 aa19.54■□□□□ 0.72
CXCL1-202ENST00000509101 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
CXCL1-202ENST00000509101 DDX20Q9UHI6 824 aaKnown RBP19.54■□□□□ 0.72
CXCL1-202ENST00000509101 SLC15A5A6NIM6 579 aa19.53■□□□□ 0.72
CXCL1-202ENST00000509101 PTPREP23469 700 aa19.53■□□□□ 0.72
CXCL1-202ENST00000509101 ATN1P54259 1190 aaPredicted RBP19.53■□□□□ 0.72
CXCL1-202ENST00000509101 USP14P54578 494 aa19.53■□□□□ 0.72
CXCL1-202ENST00000509101 TATDN1Q6P1N9 297 aa19.53■□□□□ 0.72
CXCL1-202ENST00000509101 CATSPERGQ6ZRH7 1159 aa19.53■□□□□ 0.72
CXCL1-202ENST00000509101 ZNF512BQ96KM6 892 aaPredicted RBP19.53■□□□□ 0.72
CXCL1-202ENST00000509101 LBHD1Q9BQE6 289 aaPredicted RBP19.53■□□□□ 0.72
CXCL1-202ENST00000509101 BTBD7Q9P203 1132 aa19.53■□□□□ 0.72
CXCL1-202ENST00000509101 SERPINB13Q9UIV8 391 aa19.53■□□□□ 0.72
CXCL1-202ENST00000509101 DBNLQ9UJU6 430 aaKnown RBP19.53■□□□□ 0.72
CXCL1-202ENST00000509101 IVNS1ABPQ9Y6Y0 642 aa19.53■□□□□ 0.72
CXCL1-202ENST00000509101 CYP2C19P33261 490 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 ATP2B2Q01814 1243 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 GRB14Q14449 540 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 NPLOC4Q8TAT6 608 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 ACER1Q8TDN7 264 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 SSH3Q8TE77 659 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 FAM161BQ96MY7 647 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 KIAA1683Q9H0B3 1180 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 EHD4Q9H223 541 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 C1orf115Q9H7X2 142 aa19.52■□□□□ 0.72
CXCL1-202ENST00000509101 EYSQ5T1H1 3165 aa19.51■□□□□ 0.71
CXCL1-202ENST00000509101 SPDYE16A6NNV3 312 aaPredicted RBP19.51■□□□□ 0.71
CXCL1-202ENST00000509101 IGSF3O75054 1194 aa19.51■□□□□ 0.71
CXCL1-202ENST00000509101 SURF6O75683 361 aaKnown RBP19.51■□□□□ 0.71
CXCL1-202ENST00000509101 ABCB5Q2M3G0 1257 aa19.51■□□□□ 0.71
CXCL1-202ENST00000509101 CERKLQ49MI3 558 aaPredicted RBP19.51■□□□□ 0.71
CXCL1-202ENST00000509101 MAGEB6Q8N7X4 407 aa19.51■□□□□ 0.71
CXCL1-202ENST00000509101 LPAR1Q92633 364 aa19.51■□□□□ 0.71
CXCL1-202ENST00000509101 GUCD1Q96NT3 240 aa19.51■□□□□ 0.71
CXCL1-202ENST00000509101 CCDC8Q9H0W5 538 aaPredicted RBP19.51■□□□□ 0.71
CXCL1-202ENST00000509101 RPAP3Q9H6T3 665 aaPredicted RBP19.51■□□□□ 0.71
CXCL1-202ENST00000509101 PARP14Q460N5 1801 aa19.51■□□□□ 0.71
CXCL1-202ENST00000509101 MSCO60682 206 aa19.5■□□□□ 0.71
CXCL1-202ENST00000509101 HOXC6P09630 235 aa19.5■□□□□ 0.71
CXCL1-202ENST00000509101 RTP1P59025 263 aa19.5■□□□□ 0.71
CXCL1-202ENST00000509101 LBX2Q6XYB7 198 aa19.5■□□□□ 0.71
CXCL1-202ENST00000509101 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.5■□□□□ 0.71
CXCL1-202ENST00000509101 TRPV1Q8NER1 839 aa19.5■□□□□ 0.71
CXCL1-202ENST00000509101 COL25A1Q9BXS0 654 aaPredicted RBP19.5■□□□□ 0.71
CXCL1-202ENST00000509101 POTEB2H3BUK9 544 aa19.49■□□□□ 0.71
CXCL1-202ENST00000509101 DNM1LO00429 736 aa19.49■□□□□ 0.71
CXCL1-202ENST00000509101 ATP8B2P98198 1209 aa19.49■□□□□ 0.71
CXCL1-202ENST00000509101 FAM109BQ6ICB4 259 aaPredicted RBP19.49■□□□□ 0.71
CXCL1-202ENST00000509101 CERS3Q8IU89 383 aa19.49■□□□□ 0.71
CXCL1-202ENST00000509101 CABP5Q9NP86 173 aa19.49■□□□□ 0.71
CXCL1-202ENST00000509101 PRKAG2Q9UGJ0 569 aa19.49■□□□□ 0.71
CXCL1-202ENST00000509101 ATP11BQ9Y2G3 1177 aa19.49■□□□□ 0.71
CXCL1-202ENST00000509101 CYBAP13498 195 aa19.48■□□□□ 0.71
CXCL1-202ENST00000509101 SHMT1P34896 483 aa19.48■□□□□ 0.71
CXCL1-202ENST00000509101 GJC2Q5T442 439 aaPredicted RBP19.48■□□□□ 0.71
CXCL1-202ENST00000509101 TTC6Q86TZ1 520 aa19.48■□□□□ 0.71
CXCL1-202ENST00000509101 ANTXR1Q9H6X2 564 aa19.48■□□□□ 0.71
CXCL1-202ENST00000509101 COL11A1P12107 1806 aaPredicted RBP19.48■□□□□ 0.71
CXCL1-202ENST00000509101 ZNFX1Q9P2E3 1918 aaKnown RBP19.47■□□□□ 0.71
CXCL1-202ENST00000509101 GUCY1A2P33402 732 aa19.47■□□□□ 0.71
CXCL1-202ENST00000509101 PLCD1P51178 756 aa19.47■□□□□ 0.71
CXCL1-202ENST00000509101 ZNF697Q5TEC3 545 aa19.47■□□□□ 0.71
CXCL1-202ENST00000509101 ANO1Q5XXA6 986 aa19.47■□□□□ 0.71
CXCL1-202ENST00000509101 EAF2Q96CJ1 260 aaPredicted RBP19.47■□□□□ 0.71
CXCL1-202ENST00000509101 VCANP13611 3396 aa19.47■□□□□ 0.71
CXCL1-202ENST00000509101 PLXNA1Q9UIW2 1896 aa19.46■□□□□ 0.71
CXCL1-202ENST00000509101 ADORA2AP29274 412 aa19.46■□□□□ 0.71
CXCL1-202ENST00000509101 MAP3K12Q12852 859 aa19.46■□□□□ 0.71
CXCL1-202ENST00000509101 SEPT2Q15019 361 aa19.46■□□□□ 0.71
CXCL1-202ENST00000509101 ZKSCAN2Q63HK3 967 aa19.46■□□□□ 0.71
CXCL1-202ENST00000509101 DPP9Q86TI2 863 aa19.46■□□□□ 0.71
CXCL1-202ENST00000509101 MOV10L1Q9BXT6 1211 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms