RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 DTX1Q86Y01 620 aa11.56□□□□□ -0.56
CHD1-205ENST00000508756 TMEM40Q8WWA1 233 aa11.56□□□□□ -0.56
CHD1-205ENST00000508756 ATG4CQ96DT6 458 aa11.56□□□□□ -0.56
CHD1-205ENST00000508756 PLAGL2Q9UPG8 496 aa11.56□□□□□ -0.56
CHD1-205ENST00000508756 CEP131Q9UPN4 1083 aa11.56□□□□□ -0.56
CHD1-205ENST00000508756 CEACAM5P06731 702 aa11.55□□□□□ -0.56
CHD1-205ENST00000508756 RAG1P15918 1043 aa11.55□□□□□ -0.56
CHD1-205ENST00000508756 POLR2BP30876 1174 aaKnown RBP11.55□□□□□ -0.56
CHD1-205ENST00000508756 SOX9P48436 509 aa11.55□□□□□ -0.56
CHD1-205ENST00000508756 ZNF746Q6NUN9 644 aaPredicted RBP11.55□□□□□ -0.56
CHD1-205ENST00000508756 NETO1Q8TDF5 533 aa11.55□□□□□ -0.56
CHD1-205ENST00000508756 SPATA32Q96LK8 384 aa11.55□□□□□ -0.56
CHD1-205ENST00000508756 CCDC74BQ96LY2 380 aa11.55□□□□□ -0.56
CHD1-205ENST00000508756 MKNK2Q9HBH9 465 aa11.55□□□□□ -0.56
CHD1-205ENST00000508756 CAPN10Q9HC96 672 aa11.55□□□□□ -0.56
CHD1-205ENST00000508756 MEIS3P2A8K0S8 358 aa11.54□□□□□ -0.56
CHD1-205ENST00000508756 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
CHD1-205ENST00000508756 ETV3P41162 512 aa11.54□□□□□ -0.56
CHD1-205ENST00000508756 NLRC3Q7RTR2 1065 aa11.54□□□□□ -0.56
CHD1-205ENST00000508756 CNNM2Q9H8M5 875 aa11.54□□□□□ -0.56
CHD1-205ENST00000508756 ADAMTS4O75173 837 aa11.53□□□□□ -0.56
CHD1-205ENST00000508756 CBX7O95931 251 aa11.53□□□□□ -0.56
CHD1-205ENST00000508756 NASPP49321 788 aaPredicted RBP11.53□□□□□ -0.56
CHD1-205ENST00000508756 COL9A2Q14055 689 aaPredicted RBP11.53□□□□□ -0.56
CHD1-205ENST00000508756 LRRFIP1Q32MZ4 808 aaKnown RBP11.53□□□□□ -0.56
CHD1-205ENST00000508756 CDCP2Q5VXM1 449 aa11.53□□□□□ -0.56
CHD1-205ENST00000508756 Q8N3U1 123 aa11.53□□□□□ -0.56
CHD1-205ENST00000508756 ZFP64Q9NPA5 681 aa11.53□□□□□ -0.56
CHD1-205ENST00000508756 RGS13O14921 159 aa11.52□□□□□ -0.57
CHD1-205ENST00000508756 IMPDH2P12268 514 aa11.52□□□□□ -0.57
CHD1-205ENST00000508756 IFI16Q16666 785 aaKnown RBP11.52□□□□□ -0.57
CHD1-205ENST00000508756 NKPD1Q17RQ9 610 aa11.52□□□□□ -0.57
CHD1-205ENST00000508756 SPACA3Q8IXA5 215 aa11.52□□□□□ -0.57
CHD1-205ENST00000508756 TINF2Q9BSI4 451 aa11.52□□□□□ -0.57
CHD1-205ENST00000508756 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.57
CHD1-205ENST00000508756 UBOX5O94941 541 aa11.51□□□□□ -0.57
CHD1-205ENST00000508756 NME1P15531 152 aaKnown RBP11.51□□□□□ -0.57
CHD1-205ENST00000508756 CYP7A1P22680 504 aa11.51□□□□□ -0.57
CHD1-205ENST00000508756 GBP1P32455 592 aa11.51□□□□□ -0.57
CHD1-205ENST00000508756 MFSD4AQ8N468 514 aa11.51□□□□□ -0.57
CHD1-205ENST00000508756 CAPN6Q9Y6Q1 641 aa11.51□□□□□ -0.57
CHD1-205ENST00000508756 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
CHD1-205ENST00000508756 ZNF865P0CJ78 1059 aaPredicted RBP11.5□□□□□ -0.57
CHD1-205ENST00000508756 C22orf34Q6ZV56 151 aa11.5□□□□□ -0.57
CHD1-205ENST00000508756 TNKS2Q9H2K2 1166 aa11.5□□□□□ -0.57
CHD1-205ENST00000508756 FAM155AB1AL88 458 aaPredicted RBP11.49□□□□□ -0.57
CHD1-205ENST00000508756 PRNPP04156 253 aa11.49□□□□□ -0.57
CHD1-205ENST00000508756 RUFY4Q6ZNE9 571 aa11.49□□□□□ -0.57
CHD1-205ENST00000508756 LSRQ86X29 649 aaPredicted RBP11.49□□□□□ -0.57
CHD1-205ENST00000508756 SEC16BQ96JE7 1060 aa11.49□□□□□ -0.57
CHD1-205ENST00000508756 KREMEN1Q96MU8 473 aa11.49□□□□□ -0.57
CHD1-205ENST00000508756 SLC9A7Q96T83 725 aa11.49□□□□□ -0.57
CHD1-205ENST00000508756 CCDC39Q9UFE4 941 aa11.49□□□□□ -0.57
CHD1-205ENST00000508756 FAM86C2PA6NEL3 165 aa11.48□□□□□ -0.57
CHD1-205ENST00000508756 ATF4P18848 351 aaPredicted RBP11.48□□□□□ -0.57
CHD1-205ENST00000508756 NFXL1Q6ZNB6 911 aa11.48□□□□□ -0.57
CHD1-205ENST00000508756 Q96M66 194 aa11.48□□□□□ -0.57
CHD1-205ENST00000508756 SRRTQ9BXP5 876 aaKnown RBP11.48□□□□□ -0.57
CHD1-205ENST00000508756 TMEM265A0A087WTH1 108 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 TNFRSF10CO14798 259 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 LRRN2O75325 713 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 ACRP10323 421 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 KIR3DL1P43629 444 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 TNK2Q07912 1038 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 BNIP3Q12983 259 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 CDKAL1Q5VV42 579 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 VSIG10LQ86VR7 867 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 RBBP8NLQ8NC74 664 aaPredicted RBP11.47□□□□□ -0.57
CHD1-205ENST00000508756 RNF141Q8WVD5 230 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 COX4I2Q96KJ9 171 aa11.47□□□□□ -0.57
CHD1-205ENST00000508756 CD96P40200 585 aa11.46□□□□□ -0.57
CHD1-205ENST00000508756 EIF6P56537 245 aaKnown RBP11.46□□□□□ -0.57
CHD1-205ENST00000508756 GNL2Q13823 731 aaKnown RBP11.46□□□□□ -0.57
CHD1-205ENST00000508756 ZNF574Q6ZN55 896 aaPredicted RBP11.46□□□□□ -0.57
CHD1-205ENST00000508756 BCL7CQ8WUZ0 217 aaPredicted RBP11.46□□□□□ -0.57
CHD1-205ENST00000508756 HRASLS5Q96KN8 279 aa11.46□□□□□ -0.57
CHD1-205ENST00000508756 CRBNQ96SW2 442 aa11.46□□□□□ -0.57
CHD1-205ENST00000508756 ANGEL1Q9UNK9 670 aaKnown RBP11.46□□□□□ -0.57
CHD1-205ENST00000508756 CHMP4BP1P59074 171 aa11.45□□□□□ -0.58
CHD1-205ENST00000508756 AOC3Q16853 763 aa11.45□□□□□ -0.58
CHD1-205ENST00000508756 CPLX3Q8WVH0 158 aa11.45□□□□□ -0.58
CHD1-205ENST00000508756 HSPA12BQ96MM6 686 aa11.45□□□□□ -0.58
CHD1-205ENST00000508756 TM9SF2Q99805 663 aa11.45□□□□□ -0.58
CHD1-205ENST00000508756 GIPRP48546 466 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 CLCN7P51798 805 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 SPRED2Q7Z698 418 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 WFDC3Q8IUB2 231 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 TMEM192Q8IY95 271 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 FLCNQ8NFG4 579 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 MISP3Q96FF7 219 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 SHDQ96IW2 340 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 SLC5A6Q9Y289 635 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 SNX11Q9Y5W9 270 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 ST14Q9Y5Y6 855 aa11.44□□□□□ -0.58
CHD1-205ENST00000508756 H3BS24 57 aa11.43□□□□□ -0.58
CHD1-205ENST00000508756 WNT11O96014 354 aa11.43□□□□□ -0.58
CHD1-205ENST00000508756 PRKCQQ04759 706 aa11.43□□□□□ -0.58
CHD1-205ENST00000508756 ZYXQ15942 572 aaKnown RBP11.43□□□□□ -0.58
CHD1-205ENST00000508756 VPS37DQ86XT2 251 aa11.43□□□□□ -0.58
CHD1-205ENST00000508756 DTWD2Q8NBA8 298 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms