RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 RBM46Q8TBY0 533 aaKnown RBP12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 ZKSCAN4Q969J2 545 aaPredicted RBP12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 KLRG1Q96E93 195 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 CEP95Q96GE4 821 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 ARHGEF10LQ9HCE6 1279 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 GBA2Q9HCG7 927 aaPredicted RBP12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 TCP11L1Q9NUJ3 509 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 CLIP2Q9UDT6 1046 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 ISY1Q9ULR0 285 aaKnown RBP12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 RBM19Q9Y4C8 960 aaKnown RBP12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 KLF18A0A0U1RQI7 1052 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 USP17L5A8MUK1 530 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 PHF20L1A8MW92 1017 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 UBE2Q2LH0YL09 131 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 FKBP1BP68106 108 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 FMR1Q06787 632 aaKnown RBP eCLIP12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 APOBRQ0VD83 1088 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 ANKRD13AQ8IZ07 590 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 SCYL3Q8IZE3 742 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 ENAHQ8N8S7 591 aaPredicted RBP12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 TTC14Q96N46 770 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 FEZ1Q99689 392 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 ALDH8A1Q9H2A2 487 aaPredicted RBP12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 SH2D4AQ9H788 454 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 AS3MTQ9HBK9 375 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 ZNF112Q9UJU3 913 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 MTMR7Q9Y216 660 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 SLC12A7Q9Y666 1083 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 MYH8P13535 1937 aa12.92□□□□□ -0.34
BRCC3P1-201ENST00000508559 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 LIFRP42702 1097 aa12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 IGDCC4Q8TDY8 1250 aa12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 NUP133Q8WUM0 1156 aa12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 ZSCAN31Q96LW9 406 aaPredicted RBP12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 LARP6Q9BRS8 491 aaKnown RBP12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 LY9Q9HBG7 655 aa12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 GPHNQ9NQX3 736 aaPredicted RBP12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 IL17RBQ9NRM6 502 aa12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 LIMCH1Q9UPQ0 1083 aa12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 PLIN4Q96Q06 1357 aa12.91□□□□□ -0.34
BRCC3P1-201ENST00000508559 SSC5DA1L4H1 1573 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 GOLGA8BA8MQT2 603 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 ZBTB43O43298 467 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 ITGBL1O95965 494 aaPredicted RBP12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 EEF2P13639 858 aaKnown RBP12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 STK3Q13188 491 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 COL9A3Q14050 684 aaPredicted RBP12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 TOB2Q14106 344 aaPredicted RBP12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 VGLL4Q14135 290 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 SHROOM1Q2M3G4 852 aaPredicted RBP12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 MOB2Q70IA6 237 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 CLEC10AQ8IUN9 316 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 CHMP4CQ96CF2 233 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 TMEM47Q9BQJ4 181 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 ELP3Q9H9T3 547 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 NYAP2Q9P242 653 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 ZHX2Q9Y6X8 837 aa12.9□□□□□ -0.34
BRCC3P1-201ENST00000508559 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 CALM1P0DP23 149 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 CALM2P0DP24 149 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 CALM3P0DP25 149 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 JAG1P78504 1218 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 FSTL1Q12841 308 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 SEC23AQ15436 765 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 NOL9Q5SY16 702 aaKnown RBP12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 MICU3Q86XE3 530 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 ZNF654Q8IZM8 581 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 TBC1D2Q9BYX2 928 aa12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 SLKQ9H2G2 1235 aaPredicted RBP12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
BRCC3P1-201ENST00000508559 GOLGA8AA7E2F4 631 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 DDAH1O94760 285 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 PTPRAP18433 802 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 METAP2P50579 478 aaKnown RBP eCLIP12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 HUNKP57058 714 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 CPLX2Q6PUV4 134 aaKnown RBP12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 CCDC84Q86UT8 332 aaPredicted RBP12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 SGMS1Q86VZ5 419 aa12.88□□□□□ -0.35
BRCC3P1-201ENST00000508559 ERO1BQ86YB8 467 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms