RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 TRMT44Q8IYL2 757 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 PANX2Q96RD6 677 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 AMFRQ9UKV5 643 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 PCDHA7Q9UN72 937 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 PA2G4Q9UQ80 394 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 TRIM37O94972 964 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 BAG3O95817 575 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 MPRIPQ6WCQ1 1025 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 HEATR3Q7Z4Q2 680 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 CENPKQ9BS16 269 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 USP19O94966 1318 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 RIMS2Q9UQ26 1411 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 GMNNO75496 209 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 CD2BP2O95400 341 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 GNA14O95837 355 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 GAS8O95995 478 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 POLE2P56282 527 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 ZNF174Q15697 407 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 WDR78Q5VTH9 848 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 ARHGAP18Q8N392 663 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 ANKRD42Q8N9B4 389 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 KIFAP3Q92845 792 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 DSCC1Q9BVC3 393 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 CARD14Q9BXL6 1004 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 SERTAD1Q9UHV2 236 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 TRIM35Q9UPQ4 493 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 KRIT1O00522 736 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 SNRPA1P09661 255 aaKnown RBP8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 STMN1P16949 149 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 MORC3Q14149 939 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 TTC38Q5R3I4 469 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 KCTD16Q68DU8 428 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 TYW1BQ6NUM6 668 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 PLA2G4DQ86XP0 818 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 CCDC105Q8IYK2 499 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 RETREG2Q8NC44 543 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 PSMB7Q99436 277 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 PALD1Q9ULE6 856 aa8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 ZBTB12Q9Y330 459 aaPredicted RBP8.09□□□□□ -1.12
UBE2D3-224ENST00000508474 CTIFO43310 598 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 EIF3BP55884 814 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 GUCY2DQ02846 1103 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 TTC19Q6DKK2 380 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 C11orf57Q6ZUT1 292 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 MSANTD4Q8NCY6 345 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 TEX13AQ9BXU3 409 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 TYW1Q9NV66 732 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 POLKQ9UBT6 870 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 ZNF652Q9Y2D9 606 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 CALUO43852 315 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 HSPA1LP34931 641 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 IL9RQ01113 521 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 SATB1Q01826 763 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 BEND3Q5T5X7 828 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 ANKLE2Q86XL3 938 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 C2CD5Q86YS7 1000 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 GRK7Q8WTQ7 553 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 NCOA5Q9HCD5 579 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 IQSEC3Q9UPP2 1182 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 DMRT2Q9Y5R5 561 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 GPATCH8Q9UKJ3 1502 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 KIAA0232Q92628 1395 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 HGSO14964 777 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 GSDMBQ8TAX9 411 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 OSBPL5Q9H0X9 879 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 TRMT112Q9UI30 125 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 TPCN1Q9ULQ1 816 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 ADGRL1O94910 1474 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 ZNF521Q96K83 1311 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 FAM13AO94988 1023 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 GLE1Q53GS7 698 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 BBOF1Q8ND07 529 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 SMC1BQ8NDV3 1235 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 MGARPQ8TDB4 240 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 HAUS1Q96CS2 278 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 SPZ1Q9BXG8 430 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 PLEKHA4Q9H4M7 779 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 SLC24A3Q9HC58 644 aa8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-224ENST00000508474 MAP3K7O43318 606 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 PPP6R2O75170 966 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 KCNJ6P48051 423 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 NDUFA8P51970 172 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 RRAGAQ7L523 313 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 CCDC13Q8IYE1 715 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 AFAP1L2Q8N4X5 818 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 CFAP61Q8NHU2 1237 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 STAP2Q9UGK3 403 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 RCOR1Q9UKL0 485 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 ANGPTL2Q9UKU9 493 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 STK24Q9Y6E0 443 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 DUOX2Q9NRD8 1548 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 SBNO1A3KN83 1393 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 KCNK3O14649 394 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 HOXB7P09629 217 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 GSTO1P78417 241 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 TFCP2Q12800 502 aa8.07□□□□□ -1.12
UBE2D3-224ENST00000508474 CAPRIN2Q6IMN6 1127 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms