RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 HUNKP57058 714 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 MAP3K9P80192 1104 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 SMYD5Q6GMV2 418 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 IQCA1Q86XH1 822 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 ANKRD13AQ8IZ07 590 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 SCYL3Q8IZE3 742 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 ZKSCAN4Q969J2 545 aaPredicted RBP10.65□□□□□ -0.7
SMAD1-207ENST00000507594 CCDC17Q96LX7 622 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 NEK1Q96PY6 1258 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 ZKSCAN3Q9BRR0 538 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 DNAJC18Q9H819 358 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 STX8Q9UNK0 236 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 MTMR7Q9Y216 660 aa10.65□□□□□ -0.7
SMAD1-207ENST00000507594 ARIH1Q9Y4X5 557 aaPredicted RBP10.65□□□□□ -0.7
SMAD1-207ENST00000507594 TESPA1A2RU30 521 aaPredicted RBP10.64□□□□□ -0.71
SMAD1-207ENST00000507594 TMEM88BA6NKF7 163 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 PRC1O43663 620 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 ORC4O43929 436 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 CTNND1O60716 968 aaKnown RBP10.64□□□□□ -0.71
SMAD1-207ENST00000507594 USP2O75604 605 aaPredicted RBP10.64□□□□□ -0.71
SMAD1-207ENST00000507594 ITGBL1O95965 494 aaPredicted RBP10.64□□□□□ -0.71
SMAD1-207ENST00000507594 ASNSP08243 561 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 HMGB1P09429 215 aaKnown RBP10.64□□□□□ -0.71
SMAD1-207ENST00000507594 MCM5P33992 734 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 FKBP1BP68106 108 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 ICA1Q05084 483 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 GABPAQ06546 454 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 VGLL4Q14135 290 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 NFXL1Q6ZNB6 911 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 STOX1Q6ZVD7 989 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 TMEM179Q6ZVK1 233 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 CHST3Q7LGC8 479 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMAD1-207ENST00000507594 KLRG1Q96E93 195 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 NBPF3Q9H094 633 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 AS3MTQ9HBK9 375 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 ARHGEF10LQ9HCE6 1279 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 ZBTB21Q9ULJ3 1066 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMAD1-207ENST00000507594 CYP46A1Q9Y6A2 500 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 TAF6LQ9Y6J9 622 aa10.64□□□□□ -0.71
SMAD1-207ENST00000507594 IFIT3O14879 490 aaKnown RBP10.63□□□□□ -0.71
SMAD1-207ENST00000507594 CAP2P40123 477 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 ANAPC15P60006 121 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
SMAD1-207ENST00000507594 SEPT2Q15019 361 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
SMAD1-207ENST00000507594 TMEM67Q5HYA8 995 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 PPP4R3BQ5MIZ7 849 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 TATDN1Q6P1N9 297 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 NOL8Q76FK4 1167 aaKnown RBP10.63□□□□□ -0.71
SMAD1-207ENST00000507594 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
SMAD1-207ENST00000507594 CHMP4CQ96CF2 233 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 SLC10A4Q96EP9 437 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 OTUD5Q96G74 571 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 TCEANC2Q96MN5 208 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 LRRC2Q9BYS8 371 aa10.63□□□□□ -0.71
SMAD1-207ENST00000507594 UPF3BQ9BZI7 483 aaKnown RBP10.63□□□□□ -0.71
SMAD1-207ENST00000507594 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.63□□□□□ -0.71
SMAD1-207ENST00000507594 TNKSO95271 1327 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 PASKQ96RG2 1323 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 USP17L5A8MUK1 530 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 CPA1P15085 419 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 APLP1P51693 650 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 ZNF157P51786 506 aaPredicted RBP10.62□□□□□ -0.71
SMAD1-207ENST00000507594 MFSD10Q14728 455 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 WTAPQ15007 396 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 SHROOM1Q2M3G4 852 aaPredicted RBP10.62□□□□□ -0.71
SMAD1-207ENST00000507594 ADCK5Q3MIX3 580 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 CCDC178Q5BJE1 867 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 METTL16Q86W50 562 aaKnown RBP10.62□□□□□ -0.71
SMAD1-207ENST00000507594 CLEC10AQ8IUN9 316 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 CLMNQ96JQ2 1002 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 SH2D4AQ9H788 454 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 KAT14Q9H8E8 782 aa10.62□□□□□ -0.71
SMAD1-207ENST00000507594 MYH4Q9Y623 1939 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 CCDC69A6NI79 296 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 TRIM75PA6NK02 468 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 PHF20L1A8MW92 1017 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 NMT2O60551 498 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 NT5C2P49902 561 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 RRP1BQ14684 758 aaKnown RBP10.61□□□□□ -0.71
SMAD1-207ENST00000507594 IFIT1BQ5T764 474 aaKnown RBP10.61□□□□□ -0.71
SMAD1-207ENST00000507594 CST9Q5W186 159 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 SYNE3Q6ZMZ3 975 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 DHX32Q7L7V1 743 aaKnown RBP10.61□□□□□ -0.71
SMAD1-207ENST00000507594 MB21D2Q8IYB1 491 aaPredicted RBP10.61□□□□□ -0.71
SMAD1-207ENST00000507594 LRRC47Q8N1G4 583 aaKnown RBP10.61□□□□□ -0.71
SMAD1-207ENST00000507594 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 OPTNQ96CV9 577 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 CEP95Q96GE4 821 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 TBC1D32Q96NH3 1257 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 ZSCAN10Q96SZ4 725 aaPredicted RBP10.61□□□□□ -0.71
SMAD1-207ENST00000507594 KANSL2Q9H9L4 492 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 GINM1Q9NU53 330 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 PDRG1Q9NUG6 133 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 CLIP2Q9UDT6 1046 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 ZNF112Q9UJU3 913 aa10.61□□□□□ -0.71
SMAD1-207ENST00000507594 TACC3Q9Y6A5 838 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms