RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 NEMFO60524 1076 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 STAT6P42226 847 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 LLGL1Q15334 1064 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 TTF1Q15361 905 aaPredicted RBP10.88□□□□□ -0.67
PHF3-208ENST00000506783 INF2Q27J81 1249 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 USP17L1Q7RTZ2 530 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 CLEC10AQ8IUN9 316 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 CRACR2AQ9BSW2 395 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 MEGF6O75095 1541 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 PDE8AO60658 829 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 MTIF2P46199 727 aaKnown RBP10.87□□□□□ -0.67
PHF3-208ENST00000506783 RBM6P78332 1123 aaKnown RBP10.87□□□□□ -0.67
PHF3-208ENST00000506783 MSL1Q68DK7 614 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 ADGRA1Q86SQ6 560 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 PROCA1Q8NCQ7 364 aaPredicted RBP10.87□□□□□ -0.67
PHF3-208ENST00000506783 LPIN2Q92539 896 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 LY9Q9HBG7 655 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 ZMYM6O95789 1325 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
PHF3-208ENST00000506783 FOXP2O15409 715 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 BMP6P22004 513 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 SPECC1LQ69YQ0 1117 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 ANKRD18AQ8IVF6 992 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 CASP7P55210 303 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 GOLGA6L1Q8N7Z2 621 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 MRPL44Q9H9J2 332 aaKnown RBP10.87□□□□□ -0.67
PHF3-208ENST00000506783 GNL3LQ9NVN8 582 aaKnown RBP10.87□□□□□ -0.67
PHF3-208ENST00000506783 RSPH14Q9UHP6 348 aa10.87□□□□□ -0.67
PHF3-208ENST00000506783 RTCBQ9Y3I0 505 aaKnown RBP10.87□□□□□ -0.67
PHF3-208ENST00000506783 GSG1L2A8MUP6 293 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 AKR1B15C9JRZ8 316 aaPredicted RBP10.86□□□□□ -0.67
PHF3-208ENST00000506783 TDRD12Q587J7 1177 aaKnown RBP10.86□□□□□ -0.67
PHF3-208ENST00000506783 SLC35F6Q8N357 371 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 NBPF3Q9H094 633 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 FAM207AQ9NSI2 230 aaPredicted RBP10.86□□□□□ -0.67
PHF3-208ENST00000506783 MAGEC2Q9UBF1 373 aaPredicted RBP10.86□□□□□ -0.67
PHF3-208ENST00000506783 RIPOR2Q9Y4F9 1068 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 PCCAP05165 728 aaPredicted RBP10.86□□□□□ -0.67
PHF3-208ENST00000506783 CCDC175P0C221 793 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 TFAP4Q01664 338 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 CUL4BQ13620 913 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 CCDC152Q4G0S7 254 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 SETDB2Q96T68 719 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 PDE11AQ9HCR9 933 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 C6orf229H3BNL8 230 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 CAVIN2O95810 425 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 TXKP42681 527 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 RBM5P52756 815 aaKnown RBP eCLIP10.86□□□□□ -0.67
PHF3-208ENST00000506783 ZSCAN29Q8IWY8 852 aaPredicted RBP10.86□□□□□ -0.67
PHF3-208ENST00000506783 TGFBRAP1Q8WUH2 860 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 RIN2Q8WYP3 895 aaPredicted RBP10.86□□□□□ -0.67
PHF3-208ENST00000506783 PARD6BQ9BYG5 372 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 SMARCAL1Q9NZC9 954 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 TRPC5Q9UL62 973 aaPredicted RBP10.86□□□□□ -0.67
PHF3-208ENST00000506783 SYNRGQ9UMZ2 1314 aa10.86□□□□□ -0.67
PHF3-208ENST00000506783 PALLDQ8WX93 1383 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 CCDC196A0A1B0GTZ2 297 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 KRT2P35908 639 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 ASIC1P78348 528 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 NCAPHQ15003 741 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 LRRC41Q15345 812 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 ERFEQ4G0M1 354 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 TTC38Q5R3I4 469 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 DNAAF5Q86Y56 855 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 ZNF444Q8N0Y2 327 aaPredicted RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 IGDCC4Q8TDY8 1250 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 CELF1Q92879 486 aaKnown RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 CDK5RAP3Q96JB5 506 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.85□□□□□ -0.67
PHF3-208ENST00000506783 KRT23Q9C075 422 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 KAT14Q9H8E8 782 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 DDX41Q9UJV9 622 aaKnown RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 MAP3K15Q6ZN16 1313 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 N4BP1O75113 896 aaKnown RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 PNMA6AP0CW24 399 aaPredicted RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 CAPN2P17655 700 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 TXLNAP40222 546 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 TOB1P50616 345 aaPredicted RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 TBC1D10BQ4KMP7 808 aaPredicted RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 KCNB2Q92953 911 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 CHP1Q99653 195 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.85□□□□□ -0.675e-9■■■■□ 25.7
PHF3-208ENST00000506783 ZNF652Q9Y2D9 606 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 CUTAO60888 179 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 CRKLP46109 303 aaKnown RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 CHMP4BP1P59074 171 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 SMC1AQ14683 1233 aaKnown RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 TSGA10IPQ3SY00 556 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 SMCR8Q8TEV9 937 aaPredicted RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 WASF1Q92558 559 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 GPCPD1Q9NPB8 672 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 NLRC4Q9NPP4 1024 aa10.85□□□□□ -0.67
PHF3-208ENST00000506783 FRMPD2Q68DX3 1309 aaPredicted RBP10.85□□□□□ -0.67
PHF3-208ENST00000506783 ADAMTS3O15072 1205 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 UQCRFS1P1P0C7P4 283 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 TSPY3P0CV98 308 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 TSPY8P0CW00 308 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 CCDC96Q2M329 555 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms